DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURCJ (Glutamate 5-kinase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=proB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURCH (Glutamate 5-kinase OS=Burkholderia cenocepacia (strain HI2424) GN=proB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURCC (Glutamate 5-kinase OS=Burkholderia cenocepacia (strain MC0-3) GN=proB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURCA (Glutamate 5-kinase OS=Burkholderia cenocepacia (strain AU 1054) GN=proB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SODGM (Glutamate 5-kinase OS=Sodalis glossinidius (strain morsitans) GN=proB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q   L++ G  II+V+SGA+  GR+ L Y +L          P      +  AAVGQS L+  ++ LFS  ++   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T
Sbjct:   34 QCAPLHAAGHRIIIVTSGAIAAGREYLNYPEL----------PATIASKQLLAAVGQSRLIQFWEQLFSLYNIHIGQMLLTRADMEDRERFLNARDTLRALLDNGIVPVINENDAVAT 141          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_METCA (Glutamate 5-kinase OS=Methylococcus capsulatus GN=proB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            +Q+ EL  QG +++LVSSG+V  G  RL ++           +P    + +A A+VGQ  L+  Y++LF +  + ++Q+L+T  D  + +       T+ +LL+L VIP+ NEND V+T +
Sbjct:   39 QQIAELRQQGIQVVLVSSGSVAEGMSRLGWKT----------RPHRLNELQAAASVGQMGLVQTYESLFKRHGLQTAQILLTHDDLSNRERYLNSRSTILTLLELGVIPVINENDTVTTEE 149          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_DESAD (Glutamate 5-kinase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=proB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 47/124 (37.90%), Postives = 69/124 (55.65%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            +QL  L+ +G +I+LVSSGAV  GR  +       + L DL   Q      A +A+GQS LM  YD  F +  + +SQ+L+T  D +  D      +T+  LL+ RVIPI NEND V+ ++  +
Sbjct:   39 DQLATLHERGVDIVLVSSGAVAAGRNSIPS----GAKLDDLPARQ------AASAIGQSRLMHEYDETFRRFGLVTSQVLLTRDDLKHRDRFLNARNTLSRLLEWRVIPIINENDTVAVQELEF 152          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_CLOPE (Glutamate 5-kinase OS=Clostridium perfringens GN=proB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            + ++ + G E++LVSSGA+GVG  +LR  K          KP+   + +A AAVGQ +LM +Y+  F +     +Q+L+T     +E  +  + +T  +LL+  +IPI NENDA+S
Sbjct:   39 ISDICNMGKEVVLVSSGAIGVGVGKLRLEK----------KPETIREKQAVAAVGQCALMHIYNKFFGEYSHVVAQVLLTRDVLENERMKNNVCNTFDTLLEKGIIPIVNENDAIS 144          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_ACIBY (Glutamate 5-kinase OS=Acinetobacter baumannii (strain AYE) GN=proB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            +Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++     + ++Q+L+T  D  D        D +Q+L+D RVIP+ NEND VST
Sbjct:   43 KQIADLHNAGHEIILVSSGAVAEGMVRMK----LASRPTDLPSLQ------ACAAIGQMGLIHTWSSVLENHSIRTAQVLLTHDDLADRRRYLNSCDALQNLIDWRVIPVINENDTVST 151          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_ACIBT (Glutamate 5-kinase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=proB PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            +Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++     + ++Q+L+T  D  D        D +Q+L+D RVIP+ NEND VST
Sbjct:   43 KQIADLHNAGHEIILVSSGAVAEGMVRMK----LASRPTDLPSLQ------ACAAIGQMGLIHTWSSVLENHSIRTAQVLLTHDDLADRRRYLNSCDALQNLIDWRVIPVINENDTVST 151          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_BURCJ2.165e-1337.29Glutamate 5-kinase OS=Burkholderia cepacia (strain... [more]
PROB_BURCH2.165e-1337.29Glutamate 5-kinase OS=Burkholderia cenocepacia (st... [more]
PROB_BURCC2.165e-1337.29Glutamate 5-kinase OS=Burkholderia cenocepacia (st... [more]
PROB_BURCA2.165e-1337.29Glutamate 5-kinase OS=Burkholderia cenocepacia (st... [more]
PROB_SODGM2.828e-1336.44Glutamate 5-kinase OS=Sodalis glossinidius (strain... [more]
PROB_METCA2.828e-1333.88Glutamate 5-kinase OS=Methylococcus capsulatus GN=... [more]
PROB_DESAD2.828e-1337.90Glutamate 5-kinase OS=Desulfovibrio salexigens (st... [more]
PROB_CLOPE2.828e-1336.21Glutamate 5-kinase OS=Clostridium perfringens GN=p... [more]
PROB_ACIBY2.828e-1338.66Glutamate 5-kinase OS=Acinetobacter baumannii (str... [more]
PROB_ACIBT2.828e-1338.66Glutamate 5-kinase OS=Acinetobacter baumannii (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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