DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_GEOKA (Glutamate 5-kinase OS=Geobacillus kaustophilus GN=proB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.693e-13
Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            E +  L   G ++IL++SGAV  G   L Y            +P      +A AAVGQS LM  Y + F+Q   T++QLL+T SDF   +  + L+ T+ +LL+   +PI NEND+VS  +  +
Sbjct:   32 EAIAYLKQLGHDVILITSGAVAAGFGPLGYPA----------RPTTIAGKQAAAAVGQSLLMQAYSSAFAQFGFTAAQLLLTRSDFYSRERFRNLFATITTLLENGAVPIINENDSVSIEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_CLOAB (Glutamate 5-kinase OS=Clostridium acetobutylicum GN=proB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.693e-13
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDA 518
            Q+ +L++QG ++ILVSSGA+G G  +LR +          ++P+   + +A AAVGQ  LM  Y+ LF++      Q+L+T  D   +     + +T  +LLD  +IPI NENDA
Sbjct:   41 QIADLHNQGIKVILVSSGAIGAGIGKLRLK----------ERPKTIPEKQAAAAVGQGVLMHTYEKLFAEYGQIVGQILITREDLSSKKRVVNVQNTFSALLDHGIIPIVNENDA 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURXL (Glutamate 5-kinase OS=Burkholderia xenovorans (strain LB400) GN=proB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.693e-13
Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + +          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWTR----------RPREIDELQAAAAVGQMGLAQVYESRFAEHSIQTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_RALEJ (Glutamate 5-kinase OS=Ralstonia eutropha (strain JMP134) GN=proB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+ +L S G E++LVSSGA+  G QRL +          +++P+   + +A AAVGQ  L  +Y++ F +  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAKLRSIGKEVVLVSSGAIAEGMQRLGW----------VRRPREIHELQAAAAVGQMGLAQVYESQFGRYGIRTAQVLLTHADLADRERYLNARSTLLTLLSLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PECCP (Glutamate 5-kinase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=proB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T
Sbjct:   34 QCAQQHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIATKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTMRALLDNNIVPVINENDAVAT 141          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_MICAN (Glutamate 5-kinase OS=Microcystis aeruginosa (strain NIES-843) GN=proB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            E L  L + G  ++LVSSGAVGVG +RL  +          ++P+     +A AAVGQ  LM +YD LF+ L    +Q+L+T  +  +       Y+T Q+L +L VI I NEND V+
Sbjct:   32 EVLTRLRAAGHRVVLVSSGAVGVGCRRLGIQ----------ERPKKIALKQAIAAVGQGRLMRIYDDLFTSLGQPIAQILLTRPELMERTCYVNAYNTFQALFELGVIAIVNENDTVA 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_GEOSM (Glutamate 5-kinase OS=Geobacter sp. (strain M21) GN=proB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            Q+ EL+ QG E+++VSSGAV  GRQ L         L D  +P+     +A AAVGQS LM  Y+  FS  D+  +Q+L+T  D  +    +    T+ +LL   +IP+ NEND V
Sbjct:   39 QVAELSGQGTEVVIVSSGAVAAGRQAL--------GLPD--RPRTLPQKQAAAAVGQSRLMRAYEEAFSSYDLKVAQILLTRDDLANRRRFQNARGTLDTLLACGIIPVINENDTV 144          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_GEOBB (Glutamate 5-kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=proB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            Q+ EL+ QG E+++VSSGAV  GRQ L         L D  +P+     +A AAVGQS LM  Y+  FS  D+  +Q+L+T  D  +    +    T+ +LL   +IP+ NEND V
Sbjct:   39 QVAELSGQGTEVVIVSSGAVAAGRQAL--------GLPD--RPRTLPQKQAAAAVGQSRLMRAYEEAFSSYDLKVAQILLTRDDLANRRRFQNARGTLDTLLACGIIPVINENDTV 144          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_ERWCT (Glutamate 5-kinase OS=Erwinia carotovora subsp. atroseptica GN=proB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T
Sbjct:   34 QCAQQHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIATKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTMRALLDNNIVPVINENDAVAT 141          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_AQUAE (Glutamate 5-kinase OS=Aquifex aeolicus GN=proB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 47/123 (38.21%), Postives = 74/123 (60.16%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDF--RDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            E +K+L+S G ++++VSSGAV  G ++L  +          +KP++    +A A+VGQS LM LYDT+FS   +   Q+L+T   F    E+  K    T++ LL+L V+P+ NENDAV+  +
Sbjct:   29 EGIKKLHSFGDKVLIVSSGAVLSGAKKLGIK----------EKPKDLTLKQALASVGQSYLMHLYDTIFSNYGLKVGQVLLTKDVFSKEKEERFKNAKSTLEKLLELGVVPVINENDAVAVEE 141          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_GEOKA3.693e-1336.29Glutamate 5-kinase OS=Geobacillus kaustophilus GN=... [more]
PROB_CLOAB3.693e-1337.39Glutamate 5-kinase OS=Clostridium acetobutylicum G... [more]
PROB_BURXL3.693e-1336.44Glutamate 5-kinase OS=Burkholderia xenovorans (str... [more]
PROB_RALEJ4.824e-1336.44Glutamate 5-kinase OS=Ralstonia eutropha (strain J... [more]
PROB_PECCP4.824e-1335.59Glutamate 5-kinase OS=Pectobacterium carotovorum s... [more]
PROB_MICAN4.824e-1338.98Glutamate 5-kinase OS=Microcystis aeruginosa (stra... [more]
PROB_GEOSM4.824e-1339.66Glutamate 5-kinase OS=Geobacter sp. (strain M21) G... [more]
PROB_GEOBB4.824e-1339.66Glutamate 5-kinase OS=Geobacter bemidjiensis (stra... [more]
PROB_ERWCT4.824e-1335.59Glutamate 5-kinase OS=Erwinia carotovora subsp. at... [more]
PROB_AQUAE4.824e-1338.21Glutamate 5-kinase OS=Aquifex aeolicus GN=proB PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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