DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_VIBCH (Glutamate 5-kinase OS=Vibrio cholerae GN=proB PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.300e-13
Identity = 40/120 (33.33%), Postives = 69/120 (57.50%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q  EL  QG  +++V+SGA+  GR+ L Y  L N+  +           +  AAVGQS L+ ++++LF+   +   Q+L+T +D  D +      DT+ +L++  ++P+ NENDAV+T +
Sbjct:   41 QCAELKKQGHSVVIVTSGAIAAGREHLGYPALPNAISSK----------QLLAAVGQSRLIQVWESLFAIYGIKIGQMLLTRADLDDRERFLNARDTINALVENGIVPVVNENDAVATNE 150          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_THETN (Glutamate 5-kinase OS=Thermoanaerobacter tengcongensis GN=proB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.300e-13
Identity = 42/120 (35.00%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q+  L+++G E+ILV+SGA+G G  +L             +KP+N    +A AA+GQ  L+ +Y+  F++    ++QLL+T  DF D      +  T+ +LL   VIP+ NEND V+  +
Sbjct:   30 QIANLSNKGEEVILVTSGAIGAGMGKLNLT----------EKPKNLPQKQALAAIGQGLLIEIYEKFFNEYGKITAQLLLTREDFSDRKRYLNMSYTLSNLLKWGVIPVINENDTVAVEE 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PSEU5 (Glutamate 5-kinase OS=Pseudomonas stutzeri (strain A1501) GN=proB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.300e-13
Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            +Q+  L + G E++LVSSGAV  G  RL +        A   K  +EL  +A AAVGQ  L+  +++ F++ D  ++Q+LVT  D  D         T+++L+DL V+P+ NEND V T
Sbjct:   37 DQMVALRAAGVELVLVSSGAVAAGMSRLGW--------ASRPKAVHEL--QAAAAVGQMGLIRAWESSFARCDQQTAQILVTHDDLSDRKRYLNARSTLRTLIDLGVVPVINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_LACLA (Glutamate 5-kinase OS=Lactococcus lactis subsp. lactis GN=proB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.300e-13
Identity = 44/123 (35.77%), Postives = 70/123 (56.91%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 545
            L +LN++G+E+ILV+SGA+GVG   L   K          +P+   D +A A++GQ  LM+LY  +F +     SQLL+T         R+   + + +LL L +IPI NENDA++  +  ++
Sbjct:   42 LSDLNNKGYEVILVTSGAIGVGLNVLGIDK----------RPKGIADQQALASIGQVELMSLYTQMFRRYSQKVSQLLLTRDVTDFPTSRENAENALNALLGLGIIPIINENDAIAVDEMDHQ 154          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_ACIAD (Glutamate 5-kinase OS=Acinetobacter sp. (strain ADP1) GN=proB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.300e-13
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++  +  + ++Q+L+T  D  D        D +Q+L++ RVIP+ NEND VST
Sbjct:   44 QIADLHNAGHEIILVSSGAVAEGMVRMK----LTSRPTDLPSLQ------ACAAIGQMGLIHTWSSVLEKHTIQTAQVLLTHDDLADRRRYLNSCDALQNLIEWRVIPVINENDTVST 151          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_VIBHB (Glutamate 5-kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=proB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.228e-13
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q  EL  QG  +++VSSGA+  GR+ L Y  L N   +           +  AAVGQS L+  +++LF    +   Q+L+T +D  D +      DT+ +L+   +IPI NENDAV+T +
Sbjct:   43 QCAELKKQGHSVVMVSSGAIAAGREHLGYPALPNEMASK----------QLLAAVGQSRLIQTWESLFGIYGIKIGQMLLTRADLDDRERFLNARDTINALVANDIIPIVNENDAVATNE 152          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_LACLS (Glutamate 5-kinase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=proB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.228e-13
Identity = 44/123 (35.77%), Postives = 70/123 (56.91%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 545
            L +LN++G+E+ILV+SGA+GVG   L   K          +P+   D +A A++GQ  LM+LY  +F +     SQLL+T         R+   + + +LL L +IPI NENDA++  +  ++
Sbjct:   42 LSDLNNKGYEVILVTSGAIGVGLNVLGMNK----------RPKGIADQQALASIGQVELMSLYTQMFRRYSQKVSQLLLTRDVTDFPTSRENPENALNALLALDIIPIINENDAIAVDEMDHQ 154          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_CHRVO (Glutamate 5-kinase OS=Chromobacterium violaceum GN=proB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.228e-13
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            E++ EL  +G +++LVSSGA+  G QRL +            +P+   + +A AAVGQ  L   Y++ F    + ++Q+L+T  D  D         T+ SLL+L V+PI NEND V+T
Sbjct:   37 EEVAELKRRGKQVVLVSSGAIAEGCQRLGWTV----------RPKGVHELQAAAAVGQMGLCQAYESAFRSFGLRTAQILLTHEDLADRTRYLNARSTLTSLLNLNVVPIINENDTVAT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_VIBPA (Glutamate 5-kinase OS=Vibrio parahaemolyticus GN=proB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12
Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  EL  QG  +++VSSGA+  GR+ L Y  L N   +           +  AAVGQS L+  +++LF    +   Q+L+T +D  D +      DT+ +L+   +IPI NENDAV+T
Sbjct:   43 QCAELKKQGHSVVMVSSGAIAAGREHLGYPALPNEMASK----------QLLAAVGQSRLIQTWESLFGIYGIKIGQMLLTRADLDDRERFLNARDTINALVANDIIPIVNENDAVAT 150          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_RALPJ (Glutamate 5-kinase OS=Ralstonia pickettii (strain 12J) GN=proB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L + G E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T  D  D +       T+ +LL L V+PI NEND V T
Sbjct:   40 QIAALRAAGKEVVLVSSGAIAEGMQRLGWAK----------RPKEIHELQAAAAVGQMGLAQVYESEFARHSIRTAQVLLTHGDLADRERYLNARSTLLTLLSLGVVPIINENDTVVT 147          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_VIBCH6.300e-1333.33Glutamate 5-kinase OS=Vibrio cholerae GN=proB PE=3... [more]
PROB_THETN6.300e-1335.00Glutamate 5-kinase OS=Thermoanaerobacter tengconge... [more]
PROB_PSEU56.300e-1337.82Glutamate 5-kinase OS=Pseudomonas stutzeri (strain... [more]
PROB_LACLA6.300e-1335.77Glutamate 5-kinase OS=Lactococcus lactis subsp. la... [more]
PROB_ACIAD6.300e-1338.14Glutamate 5-kinase OS=Acinetobacter sp. (strain AD... [more]
PROB_VIBHB8.228e-1335.83Glutamate 5-kinase OS=Vibrio harveyi (strain ATCC ... [more]
PROB_LACLS8.228e-1335.77Glutamate 5-kinase OS=Lactococcus lactis subsp. cr... [more]
PROB_CHRVO8.228e-1336.13Glutamate 5-kinase OS=Chromobacterium violaceum GN... [more]
PROB_VIBPA1.075e-1236.44Glutamate 5-kinase OS=Vibrio parahaemolyticus GN=p... [more]
PROB_RALPJ1.075e-1236.44Glutamate 5-kinase OS=Ralstonia pickettii (strain ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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