DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_RALME (Glutamate 5-kinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=proB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12
Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+ +L   G E++LVSSGA+  G QRL + +          +P+   + +A AAVGQ  L  +Y++ F +  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAKLRGTGKEVVLVSSGAIAEGMQRLGWAR----------RPKEIHELQAAAAVGQMGLAQVYESQFGRYGIRTAQVLLTHADLADRERYLNARSTLLTLLSLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_GLOVI (Glutamate 5-kinase OS=Gloeobacter violaceus GN=proB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12
Identity = 48/119 (40.34%), Postives = 61/119 (51.26%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            E L  L   G  IILVSSGAVGVG  RL  +          ++P      +A AAVGQ  LM++YD LF  L    +Q+L+T  D  D        +T+  L  L  +PI NEND V+T
Sbjct:   31 ETLTRLRRAGHRIILVSSGAVGVGCARLGLK----------ERPATVAGKQAAAAVGQGLLMSMYDRLFGALGQPVAQVLLTRQDLMDRVRYLNARETLSELWRLGTVPIVNENDTVAT 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_ERWT9 (Glutamate 5-kinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=proB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12
Identity = 41/118 (34.75%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ +FS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T
Sbjct:   34 QCAQQHAAGHRIVIVTSGAMAAGREHLGYPEL----------PPTIASKQLLAAVGQSRLIQLWEQMFSIYGIHIGQMLLTRADLEDRERFLNARDTLRALLDNHIVPVINENDAVAT 141          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_ENTFA (Glutamate 5-kinase OS=Enterococcus faecalis GN=proB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            L +L++QG EIILVSSGA+GVG  +L      N S+     P+ +    A AAVGQ+ LM +Y+  FS      +Q+L+T       + R  + +T + LL + +IPI NEND V+
Sbjct:   39 LSDLSNQGKEIILVSSGAIGVGLNKL------NLSVRPTTIPEQQ----AVAAVGQAELMNIYNQRFSTYSQQMAQVLLTRDVIEYPESRNNVTNTFEQLLKMNIIPIVNENDTVA 144          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURTA (Glutamate 5-kinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=proB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12
Identity = 42/118 (35.59%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L ++G E++LVSSGA+  G QRL + +          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRNEGKEVVLVSSGAIAEGMQRLGWSR----------RPREIDELQAAAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SHEWM (Glutamate 5-kinase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q+  L   G E++L +SGA+  GR+ L Y KL ++ +A+ Q           AAVGQS L+  +  LFS   +   QLL+T +D  D +      D++ +LL+  +IPI NENDAV+T +
Sbjct:   38 QMSALMKAGVEVVLCTSGAIAAGREHLGYPKLADT-VANKQ---------LLAAVGQSQLILAWSQLFSIYGLHVGQLLLTQADLHDRERYLNARDSLNALLNNGIIPIINENDAVATNE 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_RALEH (Glutamate 5-kinase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+ +L   G E++LVSSGA+  G QRL +          +++P+   + +A AAVGQ  L  +Y++ F +  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAKLRVAGKEVVLVSSGAIAEGMQRLGW----------VRRPKEIHELQAAAAVGQMGLAQVYESQFGRYGIRTAQVLLTHADLADRERYLNARSTLLTLLSLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_GEOTN (Glutamate 5-kinase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 44/115 (38.26%), Postives = 63/115 (54.78%), Query Frame = 3
Query:  198 GFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            G +IIL++SGAV  G   L Y            +P      +A AAVGQS LM  Y   F+Q   T++QLL+T SDF   +  + L+ T+ +LL+   +PI NEND+VS  +  +
Sbjct:   41 GHDIILITSGAVAAGFGPLGYPT----------RPTTIAGKQAAAAVGQSLLMQAYSAQFAQFGFTAAQLLLTRSDFYSRERFRNLFATITTLLEHGAVPIINENDSVSVEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_DECAR (Glutamate 5-kinase OS=Dechloromonas aromatica (strain RCB) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L  Q  E++LVSSGA+  G QRL + K          +P++  + +A AAVGQ  L+ +Y+  F++  + ++Q+L+T  D  D         T+ +LL+L V+PI NEND V T
Sbjct:   39 QIAVLRQQDKEVVLVSSGAIACGMQRLGWAK----------RPKSVHELQAAAAVGQMGLVQVYEGAFAKHGLHTAQILLTHDDLADRKRYLNARSTLNTLLELGVVPIINENDTVVT 146          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURPS (Glutamate 5-kinase OS=Burkholderia pseudomallei GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRGAGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_RALME1.075e-1235.59Glutamate 5-kinase OS=Ralstonia metallidurans (str... [more]
PROB_GLOVI1.075e-1240.34Glutamate 5-kinase OS=Gloeobacter violaceus GN=pro... [more]
PROB_ERWT91.075e-1234.75Glutamate 5-kinase OS=Erwinia tasmaniensis (strain... [more]
PROB_ENTFA1.075e-1239.66Glutamate 5-kinase OS=Enterococcus faecalis GN=pro... [more]
PROB_BURTA1.075e-1235.59Glutamate 5-kinase OS=Burkholderia thailandensis (... [more]
PROB_SHEWM1.403e-1237.50Glutamate 5-kinase OS=Shewanella woodyi (strain AT... [more]
PROB_RALEH1.403e-1235.59Glutamate 5-kinase OS=Ralstonia eutropha (strain A... [more]
PROB_GEOTN1.403e-1238.26Glutamate 5-kinase OS=Geobacillus thermodenitrific... [more]
PROB_DECAR1.403e-1236.44Glutamate 5-kinase OS=Dechloromonas aromatica (str... [more]
PROB_BURPS1.403e-1236.44Glutamate 5-kinase OS=Burkholderia pseudomallei GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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