DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURP6 (Glutamate 5-kinase OS=Burkholderia pseudomallei (strain 668) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRGAGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURP1 (Glutamate 5-kinase OS=Burkholderia pseudomallei (strain 1710b) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRGAGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURMS (Glutamate 5-kinase OS=Burkholderia mallei (strain SAVP1) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRGAGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURMA (Glutamate 5-kinase OS=Burkholderia mallei GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRGAGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURM9 (Glutamate 5-kinase OS=Burkholderia mallei (strain NCTC 10229) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRGAGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURM7 (Glutamate 5-kinase OS=Burkholderia mallei (strain NCTC 10247) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRGAGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_AZOSB (Glutamate 5-kinase OS=Azoarcus sp. (strain BH72) GN=proB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L ++G EI+LVSSGA+  G QRL + K          +P      +A AAVGQ  L+  Y+  FS+  + ++Q+L+T  D  D         T+ +LL+L V+PI NEND V T
Sbjct:   38 QIAALRARGREIVLVSSGAIAAGMQRLGWVK----------RPHEMHRLQAAAAVGQMGLVEAYEKAFSRHGLQTAQILLTHEDLADRTRYLNARSTLVTLLELGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_VIBF1 (Glutamate 5-kinase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=proB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q  +L   G ++I+V+SGA+  GR+ L Y +L          P+   + +  AAVGQS L+  + +LF    V   Q+L+T +D  D +      D +Q+LL   ++PI NENDAV+T +
Sbjct:   35 QCVQLKKAGHQVIVVTSGAIAAGREHLNYPEL----------PKTMANKQLLAAVGQSCLIQAWQSLFGIYGVDVGQMLLTRADLDDRERYLNARDMLQALLKNNIVPIVNENDAVATNE 144          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SYMTH (Glutamate 5-kinase OS=Symbiobacterium thermophilum GN=proB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 47/120 (39.17%), Postives = 67/120 (55.83%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q+ +L+ +G ++ILV+SGAVG G  RL         LA+  +P      +A AAVGQ  LM  Y+ LFS+  +   Q+L+T  D  D D R      ++ LL   VIPI NEND V++ +
Sbjct:   38 QIADLHFEGRQVILVTSGAVGAGLGRL--------GLAE--RPAEVAAKQALAAVGQGLLMQRYEGLFSEYGLVVGQVLLTREDLEDPDRRASSAQVMERLLAWGVIPIVNENDTVTSEE 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SHEON (Glutamate 5-kinase OS=Shewanella oneidensis GN=proB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q+  L   G E++L +SGA+  GR+ L+Y  L          P    + +  AAVGQS L+  +  LFS   +   QLL+T +D  D +      DT+ +LL   +IPI NENDAV+T +
Sbjct:   38 QMAALMRSGVEVVLCTSGAIAAGREHLQYPAL----------PDTMANKQLLAAVGQSQLILAWAQLFSIYGLHVGQLLLTRADLHDRERYLNARDTLNALLANNIIPIINENDAVATNE 147          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_BURP61.403e-1236.44Glutamate 5-kinase OS=Burkholderia pseudomallei (s... [more]
PROB_BURP11.403e-1236.44Glutamate 5-kinase OS=Burkholderia pseudomallei (s... [more]
PROB_BURMS1.403e-1236.44Glutamate 5-kinase OS=Burkholderia mallei (strain ... [more]
PROB_BURMA1.403e-1236.44Glutamate 5-kinase OS=Burkholderia mallei GN=proB ... [more]
PROB_BURM91.403e-1236.44Glutamate 5-kinase OS=Burkholderia mallei (strain ... [more]
PROB_BURM71.403e-1236.44Glutamate 5-kinase OS=Burkholderia mallei (strain ... [more]
PROB_AZOSB1.403e-1238.14Glutamate 5-kinase OS=Azoarcus sp. (strain BH72) G... [more]
PROB_VIBF11.833e-1235.00Glutamate 5-kinase OS=Vibrio fischeri (strain ATCC... [more]
PROB_SYMTH1.833e-1239.17Glutamate 5-kinase OS=Symbiobacterium thermophilum... [more]
PROB_SHEON1.833e-1236.67Glutamate 5-kinase OS=Shewanella oneidensis GN=pro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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