DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SHEAM (Glutamate 5-kinase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=proB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G E++LV+SGA+  GR+ L Y  L          P    + +  AAVGQS L+  +  LFS   +   QLL+T +D  D +      DT+ +LL   ++PI NENDAV+T
Sbjct:   38 QMAGLMKSGVEVVLVTSGAIAAGREHLGYPVL----------PDTMANKQLLAAVGQSQLILAWSQLFSIYGLHVGQLLLTRADLHDRERYLNARDTLNALLAQGIVPIINENDAVAT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PROMH (Glutamate 5-kinase OS=Proteus mirabilis (strain HI4320) GN=proB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + + +G  II+V+SGA+  GR+ L Y  L          P      +  AAVGQS+L+ ++  LF+   +   Q+L+T +D  D +      DT+ +LLD ++IP+ NENDAV+T
Sbjct:   34 QCAKQHEKGHRIIIVTSGAIAAGREYLNYPDL----------PATIASKQLLAAVGQSALIQVWKQLFAIYGIHIGQMLLTRADIEDRERFLNARDTLHALLDNKIIPVINENDAVAT 141          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_LACS1 (Glutamate 5-kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=proB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVS 551
            L  L ++  E++LVSSGAVGVG        L N  L  +Q+P+   + +A AA+GQS LM +Y   F+     +SQ+L+T       + R+ + +T   LL  +VIP+ NEND V+  +  ++ S
Sbjct:   40 LSGLVNEDKEVVLVSSGAVGVG--------LANMGL--VQRPKQIPEQQALAAIGQSQLMTIYQQRFAMYSQKTSQILLTHDVLTYPESRENVLNTFNELLKWKVIPVVNENDTVAVDEMDHQTS 154          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_CUPTR (Glutamate 5-kinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=proB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G E++LVSSGA+  G QRL + +          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIARLRVAGKEVVLVSSGAIAEGMQRLGWAR----------RPKEIHELQAAAAVGQMGLAQVYESQFTRYGIRTAQVLLTHADLADRERYLNARSTLLTLLSLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_AZOSE (Glutamate 5-kinase OS=Azoarcus sp. (strain EbN1) GN=proB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L   G +++LVSSGA+  G QRL ++K          +P      +A AAVGQ  L+  Y+  FS+ ++ ++Q+L+T  D  D         T+ +LL+L V+PI NEND + T
Sbjct:   38 QIATLRGAGKQVVLVSSGAIAAGMQRLGWQK----------RPHEMHKLQAAAAVGQMGLVKAYEDAFSRHNLHTAQILLTHDDLADRKRYLNARSTLTTLLELGVVPIINENDTIVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SCHPO (Probable glutamate 5-kinase OS=Schizosaccharomyces pombe GN=SPAC17H9.13c PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.394e-12
Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDG-KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            E + +L   G  ++LVSSG + +G +RL           DL K  ++L   +A AAVGQ  L++L+DTLF+QL    +Q+L+T +D  +        +T+  LL   V+PI NEND +S ++
Sbjct:   41 ETVVKLRKLGHNVVLVSSGGIAMGLRRL-----------DLPKRPSKLSAVQAIAAVGQGRLISLWDTLFTQLRQPIAQVLITRNDIAERSQYVNAANTISELLHFGVVPIVNENDTLSVQE 151          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SACD2 (Glutamate 5-kinase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=proB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.394e-12
Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            +Q+  L+ +G+E++LVSSGAV  G  RL +        A+  K  +EL  +A AAVGQSSL+  Y+  F +  + ++Q+L+   D  +         T+++L  L VIPI NEND V T
Sbjct:   39 KQMAALSKRGYEVVLVSSGAVAAGMTRLGW--------AERPKALHEL--QAAAAVGQSSLIQAYEQEFQKYSIKTAQILLDHDDLSNRQRYLNARSTLRTLTKLGVIPIVNENDTVVT 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PROMP (Glutamate 5-kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=proB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.394e-12
Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 3
Query:  195 QGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            +G ++ILV+SGAVG+G ++L     +N+   +L   Q      A AAVGQ +LM LY+    +L    +Q+L+T +DF   +       T Q L+DL VIPI NEND+++  +  Y
Sbjct:   38 KGNKVILVTSGAVGLGCKKLN----LNTRPKELSALQ------AVAAVGQVNLMTLYEKTMKKLGHNIAQILITKTDFDSRESFNNASKTFQKLIDLNVIPIVNENDSIANEELKY 143          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_METPP (Glutamate 5-kinase OS=Methylibium petroleiphilum (strain PM1) GN=proB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.394e-12
Identity = 42/116 (36.21%), Postives = 66/116 (56.90%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            QL  L  QG E+++VSSGA+  G +RL +            +P+   + +A AAVGQ  L  +Y++  S+  + S+Q+L+T +D  D +       T+ +LL L+VIP+ NEND V
Sbjct:   38 QLASLAGQGREVLMVSSGAIAEGMKRLGWNA----------RPKEIHELQAAAAVGQMGLAQMYESKLSEHGIGSAQVLLTHADLADRERYLNARSTLLTLLSLKVIPVINENDTV 143          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SYNY3 (Glutamate 5-kinase OS=Synechocystis sp. (strain PCC 6803) GN=proB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12
Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            E + +L  QG  ++LVSSGA+GVG  RL             ++P+     +A AAVGQ  LM  YD LFS L    +Q+L+T  +  +       Y+T Q+L +L VI I NEND V+
Sbjct:   37 ETVCKLIGQGHRVVLVSSGAIGVGCSRLGLT----------ERPKKMALKQAIAAVGQGRLMRTYDDLFSSLRQPIAQILLTRRELIERTAYVNAYNTFQALFELGVIAIVNENDTVA 144          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_SHEAM1.833e-1237.29Glutamate 5-kinase OS=Shewanella amazonensis (stra... [more]
PROB_PROMH1.833e-1235.59Glutamate 5-kinase OS=Proteus mirabilis (strain HI... [more]
PROB_LACS11.833e-1236.00Glutamate 5-kinase OS=Lactobacillus salivarius sub... [more]
PROB_CUPTR1.833e-1235.59Glutamate 5-kinase OS=Cupriavidus taiwanensis (str... [more]
PROB_AZOSE1.833e-1235.59Glutamate 5-kinase OS=Azoarcus sp. (strain EbN1) G... [more]
PROB_SCHPO2.394e-1236.07Probable glutamate 5-kinase OS=Schizosaccharomyces... [more]
PROB_SACD22.394e-1237.82Glutamate 5-kinase OS=Saccharophagus degradans (st... [more]
PROB_PROMP2.394e-1237.93Glutamate 5-kinase OS=Prochlorococcus marinus subs... [more]
PROB_METPP2.394e-1236.21Glutamate 5-kinase OS=Methylibium petroleiphilum (... [more]
PROB_SYNY33.127e-1238.98Glutamate 5-kinase OS=Synechocystis sp. (strain PC... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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