DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_GEOSW (Glutamate 5-kinase OS=Geobacillus sp. (strain WCH70) GN=proB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            E +  +   G E+IL++SGAV  G   L Y            +P      +A AAVGQ  LM  Y + F Q  +T+ Q+L+T  DF   +    L+ T+ +LL   V+PI NEND+VS  +  +
Sbjct:   32 ESIAYMKQLGHEVILITSGAVAAGFGPLGYPS----------RPTTTAGKQAAAAVGQGLLMQGYISAFKQFGITTGQILLTREDFYSRERFHNLFSTITTLLACGVLPIINENDSVSVEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_DEHSC (Glutamate 5-kinase OS=Dehalococcoides sp. (strain CBDB1) GN=proB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12
Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            Q+ EL   G EI++VSSGA+  GR ++  R +          P++    +  AA+GQS LM  YD LFS   +T +Q L+T SD  D        +T+ +L++L +I I NEND V+
Sbjct:   36 QIAELTRLGTEIVIVSSGAIAAGRSKMGIRHI----------PKDVPFKQVLAAIGQSQLMNYYDQLFSPHGLTVAQGLLTKSDLSDRSGYLNARNTLLALMELGIITIVNENDVVA 142          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_DEHSB (Glutamate 5-kinase OS=Dehalococcoides sp. (strain BAV1) GN=proB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12
Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            Q+ EL   G EI++VSSGA+  GR ++  R +          P++    +  AA+GQS LM  YD LFS   +T +Q L+T SD  D        +T+ +L++L +I I NEND V+
Sbjct:   36 QIAELTRLGTEIVIVSSGAIAAGRSKMGIRHI----------PKDVPFKQVLAAIGQSQLMNYYDQLFSPHGLTVAQGLLTKSDLSDRSGYLNARNTLLALMELGIITIVNENDVVA 142          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_THICR (Glutamate 5-kinase OS=Thiomicrospira crunogena (strain XCL-2) GN=proB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 41/118 (34.75%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L  QG E+++VSSG+V  G QRL +           Q+P    + +A AAVGQ  L+  Y++ F++  + ++Q+L+T  D  +        +T+Q+LL+  V+P+ NEND V T
Sbjct:   41 QMVTLRQQGIELVIVSSGSVAEGMQRLGWS----------QRPSELNELQAAAAVGQMGLVQAYESEFAKNGIHTAQILMTHDDLSNRARYLNASNTIQTLLEHGVVPVINENDTVVT 148          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_RALSO (Glutamate 5-kinase OS=Ralstonia solanacearum GN=proB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L + G E++LVSSGA+  G QRL + +          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T  D  D +       T+ +LL L V+PI NEND V T
Sbjct:   40 QIAALRAAGKEVVLVSSGAIAEGMQRLGWTR----------RPKEIHELQAAAAVGQMGLAQVYESEFARHGIRTAQVLLTHGDLADRERYLNARSTLLTLLGLGVVPIINENDTVVT 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_DESVV (Glutamate 5-kinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=proB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            QL  L   G  ++LVSSGAV  GR  LR          D  +       +A +AVGQS LM  YD  F++    S+Q+L+T  D R+ +      +T Q+LLD  VIP+ NEND V+ ++  +
Sbjct:   43 QLSALQESGKRVVLVSSGAVAAGRSALR----------DCCEIAGMPHKQAASAVGQSRLMHHYDEAFARYGHLSAQVLLTRDDLRNRERFLNARNTFQALLDWGVIPVVNENDTVAVQELKF 155          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_DESVH (Glutamate 5-kinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=proB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            QL  L   G  ++LVSSGAV  GR  LR          D  +       +A +AVGQS LM  YD  F++    S+Q+L+T  D R+ +      +T Q+LLD  VIP+ NEND V+ ++  +
Sbjct:   43 QLSALQESGKRVVLVSSGAVAAGRSALR----------DCCEIAGMPHKQAASAVGQSRLMHHYDEAFARYGHLSAQVLLTRDDLRNRERFLNARNTFQALLDWGVIPVVNENDTVAVQELKF 155          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_DESPS (Glutamate 5-kinase OS=Desulfotalea psychrophila GN=proB PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 41/123 (33.33%), Postives = 65/123 (52.85%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            ++  L   G E+ILVSSGAV  GR+++ ++            P    + +A AA+GQS LM  Y+  F   ++  +Q+L+T +D    D    + +T+ +LL   V PI NEND VS  +  +
Sbjct:   40 EISYLRQSGHEVILVSSGAVAAGRKKISWQD---------SAPLGMKEKQALAAIGQSHLMRTYEEAFGFYELDVAQILLTHADLSHRDRYLNIRNTILTLLKFGVTPIINENDTVSVEELKF 153          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BORPE (Glutamate 5-kinase OS=Bordetella pertussis GN=proB PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L+ QG +++LVSSGA+  G  RL +RK   S++ +LQ         A AAVGQ  L   Y+  F++  + ++Q+L+T  D  D         T+ +LL L V+PI NEND V T
Sbjct:   44 QIAALHQQGKQVVLVSSGAIAEGMARLGWRKRP-SAMHELQ---------AAAAVGQMGLCQAYEAAFAEFGLRTAQILLTHEDLADRHRYLNARSTLFALLRLGVVPIVNENDTVVT 151          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BORPA (Glutamate 5-kinase OS=Bordetella parapertussis GN=proB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L+ QG +++LVSSGA+  G  RL +RK   S++ +LQ         A AAVGQ  L   Y+  F++  + ++Q+L+T  D  D         T+ +LL L V+PI NEND V T
Sbjct:   44 QIAALHQQGKQVVLVSSGAIAEGMARLGWRKRP-SAMHELQ---------AAAAVGQMGLCQAYEAAFAEFGLRTAQILLTHEDLADRHRYLNARSTLFALLRLGVVPIVNENDTVVT 151          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_GEOSW3.127e-1234.68Glutamate 5-kinase OS=Geobacillus sp. (strain WCH7... [more]
PROB_DEHSC3.127e-1237.61Glutamate 5-kinase OS=Dehalococcoides sp. (strain ... [more]
PROB_DEHSB3.127e-1237.61Glutamate 5-kinase OS=Dehalococcoides sp. (strain ... [more]
PROB_THICR4.083e-1234.75Glutamate 5-kinase OS=Thiomicrospira crunogena (st... [more]
PROB_RALSO4.083e-1235.59Glutamate 5-kinase OS=Ralstonia solanacearum GN=pr... [more]
PROB_DESVV4.083e-1237.40Glutamate 5-kinase OS=Desulfovibrio vulgaris subsp... [more]
PROB_DESVH4.083e-1237.40Glutamate 5-kinase OS=Desulfovibrio vulgaris (stra... [more]
PROB_DESPS4.083e-1233.33Glutamate 5-kinase OS=Desulfotalea psychrophila GN... [more]
PROB_BORPE4.083e-1238.14Glutamate 5-kinase OS=Bordetella pertussis GN=proB... [more]
PROB_BORPA4.083e-1238.14Glutamate 5-kinase OS=Bordetella parapertussis GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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