DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BORBR (Glutamate 5-kinase OS=Bordetella bronchiseptica GN=proB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L+ QG +++LVSSGA+  G  RL +RK   S++ +LQ         A AAVGQ  L   Y+  F++  + ++Q+L+T  D  D         T+ +LL L V+PI NEND V T
Sbjct:   44 QIAALHQQGKQVVLVSSGAIAEGMARLGWRKRP-SAMHELQ---------AAAAVGQMGLCQAYEAAFAEFGLRTAQILLTHEDLADRHRYLNARSTLFALLRLGVVPIVNENDTVVT 151          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_ALISL (Glutamate 5-kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=proB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q   L   G ++I+V+SGA+  GR+ L Y +L          P+   + +  AAVGQS L+  + +LF+   V   Q+L+T +D  D +      D +Q+LL   ++PI NENDAV+T +
Sbjct:   35 QCVHLKKLGHQVIVVTSGAIAAGREHLNYPEL----------PKTMANKQLLAAVGQSCLIQAWQSLFAIYGVNVGQMLLTRADLDDRERYLNARDMLQALLKNGIVPIVNENDAVATNE 144          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRGC (Glutamate 5-kinase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=proB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12
Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            QL  L+  G E+ILVSSGA+  G   L ++K          +P   +D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IP+ NEND+V+
Sbjct:   33 QLALLHEAGHELILVSSGAIAAGFSSLGFKK----------RPTKVVDKQASAAVGQGLLLEEYTTNLLLKQIISAQILLTQDDFADKRRYKNAHQALSVLLNRGAIPVINENDSVA 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_HERA2 (Glutamate 5-kinase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=proB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12
Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK-ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            Q+ +L   G E++LVSSGAV  G +RL +            K + EL  K A AAVGQ  LM +Y  LF   DV  +Q L+T +D RD         T+ + L++ V+PI NENDAV+
Sbjct:   36 QMAQLREAGHEVVLVSSGAVLAGWERLGF-----------PKRRRELTHKQALAAVGQGRLMHIYGQLFEIYDVPVAQTLLTRADLRDRVRYLNARATLLTCLEIGVLPIINENDAVA 142          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_DESDG (Glutamate 5-kinase OS=Desulfovibrio desulfuricans (strain G20) GN=proB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12
Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVSCSL 560
            Q+ +L+ +G +++LVSSGAV  GR  LR          +++   ++   +A +AVGQS LM  YD  F +  + S+Q+L+T  D R         +T  +L+D   +PI NEND V+ R+  +  + SL
Sbjct:   43 QIADLHGRGVDVVLVSSGAVSAGRAVLR-------RCCEIKGMPHK---QAASAVGQSRLMHYYDEAFGRHGIISAQILLTKDDLRSRHRFLNARNTFAALMDWHAVPIVNENDTVAVRELEFGDNDSL 161          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_NITEU (Glutamate 5-kinase OS=Nitrosomonas europaea GN=proB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            Q+  L   G E++LVSSGAV  G QRL + K+  ++L +LQ         A AAVGQ  L   Y   FS+ ++ ++Q+L+T  D            T+ +LL+L +IP+ NEND V
Sbjct:   39 QISRLRQMGKEVVLVSSGAVAEGMQRLGW-KMRPAALYELQ---------AAAAVGQMGLAQAYADCFSEYELQTAQILLTHDDLSSRKRYLNARSTILTLLNLGIIPVINENDTV 144          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_DEHE1 (Glutamate 5-kinase OS=Dehalococcoides ethenogenes (strain 195) GN=proB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            Q+ +L   G E+I+VSSGA+  GR ++  R +          P++    +  AA+GQS LM  YD LFS   +T +Q L+T SD  D        +T+ +L++L VI I NEND V+
Sbjct:   36 QIADLTRLGTEVIIVSSGAIAAGRAKMGLRHI----------PKDVPFKQVLAAIGQSQLMNYYDQLFSPHGLTVAQGLLTKSDLSDRSGYLNARNTLLALMELGVITIVNENDVVA 142          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BACSU (Glutamate 5-kinase 1 OS=Bacillus subtilis GN=proB PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            + +  L   G E+IL++SGAV  G   L Y            +P      +A AAVGQ+ LM  Y   F Q  +T  Q+L+T +DF   +  +  Y T+  LL+  VIPI NEND+ S  +  +
Sbjct:   32 QAISVLKKAGHEMILITSGAVAAGFSSLGYPS----------RPVTIKGKQAAAAVGQTLLMQQYMNQFKQYSLTPGQILLTRNDFSKRERYRNAYATIMELLERGVIPIINENDSTSVEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB1_BACLD (Glutamate 5-kinase 1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=proB1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 3
Query:  186 LNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            L  +G E+I +SSGAV  G  +L Y            +P      +A AAVGQS LM  Y   F+  D+  +Q+L+T +DF   +  +  Y TV  L++  ++PI NEND+VS  +  +
Sbjct:   37 LKKEGHEVIFISSGAVAAGFLQLGYPA----------RPVTLKGKQAAAAVGQSLLMQTYIEHFADHDIKPAQILLTRNDFAKRERYRNAYATVMELIERGLVPIINENDSVSVEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRSV (Glutamate 5-kinase OS=Streptococcus sanguinis (strain SK36) GN=proB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND V+
Sbjct:   33 QLALLHEAGHELILVSSGAIAAGFSSLGFKK----------RPTKVADKQASAAVGQGLLLEEYTTNLLLKQIISAQILLTQDDFADKRRYKNAHQALSVLLNRGAIPIINENDTVA 139          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_BORBR4.083e-1238.14Glutamate 5-kinase OS=Bordetella bronchiseptica GN... [more]
PROB_ALISL4.083e-1235.00Glutamate 5-kinase OS=Aliivibrio salmonicida (stra... [more]
PROB_STRGC5.333e-1236.75Glutamate 5-kinase OS=Streptococcus gordonii (stra... [more]
PROB_HERA25.333e-1240.68Glutamate 5-kinase OS=Herpetosiphon aurantiacus (s... [more]
PROB_DESDG5.333e-1234.11Glutamate 5-kinase OS=Desulfovibrio desulfuricans ... [more]
PROB_NITEU6.965e-1237.93Glutamate 5-kinase OS=Nitrosomonas europaea GN=pro... [more]
PROB_DEHE16.965e-1237.61Glutamate 5-kinase OS=Dehalococcoides ethenogenes ... [more]
PROB_BACSU6.965e-1234.68Glutamate 5-kinase 1 OS=Bacillus subtilis GN=proB ... [more]
PROB1_BACLD6.965e-1235.29Glutamate 5-kinase 1 OS=Bacillus licheniformis (st... [more]
PROB_STRSV9.097e-1237.61Glutamate 5-kinase OS=Streptococcus sanguinis (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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