DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SHESH (Glutamate 5-kinase OS=Shewanella sediminis (strain HAW-EB3) GN=proB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q+  L   G E++L +SGA+  GR+ L Y +L          P    + +  AAVGQS L+  +  LFS   +   QLL+T +D  D +      D++ +LL   +IPI NENDAV+T +
Sbjct:   38 QMAALMKAGVEVVLCTSGAIAAGREHLGYPEL----------PDTVANKQLLAAVGQSQLILAWAQLFSIYGLHVGQLLLTRADLHDRERYLNARDSLNALLAQGIIPIINENDAVATNE 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_CHRSD (Glutamate 5-kinase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=proB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            +Q+  L+++G E++LVSSGAV  G  RL +          + +P    + +A AAVGQS L   Y+  F++  + S+Q+L+T  D  +          ++SL+ LRV+P+ NEND V T
Sbjct:   44 DQIAALHARGIEVVLVSSGAVAEGMARLGW----------VTRPSAVHELQAAAAVGQSGLSQCYEEHFARHGLRSAQVLLTHDDLSNRKRYLNARSALRSLVALRVVPVINENDTVVT 152          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BACC2 (Glutamate 5-kinase OS=Bacillus cereus (strain G9842) GN=proB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            L  L  +G E++L++SGAV  G   L Y            +P      +A AAVGQS LM  Y   F +  + ++QLL+T SDF  ++     Y T+  LL+   +PI NEND++S  +  +
Sbjct:   34 LARLKEEGHEVVLITSGAVAAGFSALGYPS----------RPVTIKGKQAAAAVGQSLLMQAYTEEFRKYGIVTAQLLLTRSDFSRKEQYSNAYATLGELLNRSALPIINENDSISLEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_TERTT (Glutamate 5-kinase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=proB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 42/119 (35.29%), Postives = 65/119 (54.62%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            EQ+  L+ +G+E++LVSSGAV  G  RL ++           +P+   + +A AAVGQS L+  Y+  F +     +Q+L+   D            T+++L++L VIPI NEND V T
Sbjct:   39 EQIAALSKKGYEVVLVSSGAVAAGMTRLGWKS----------RPKAIHEQQAAAAVGQSLLIQAYEQEFQRYSKKIAQVLLDHDDLSSRQRYLNARSTLRTLMNLDVIPIINENDTVVT 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRZT (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=proB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V
Sbjct:   32 QQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSV 138          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRZP (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain P1031) GN=proB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V
Sbjct:   32 QQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSV 138          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRZJ (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain JJA) GN=proB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V
Sbjct:   32 QQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSV 138          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRR6 (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=proB PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V
Sbjct:   32 QQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSV 138          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRPN (Glutamate 5-kinase OS=Streptococcus pneumoniae GN=proB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V
Sbjct:   32 QQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSV 138          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRPJ (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=proB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V
Sbjct:   32 QQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSV 138          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_SHESH9.097e-1235.83Glutamate 5-kinase OS=Shewanella sediminis (strain... [more]
PROB_CHRSD9.097e-1235.29Glutamate 5-kinase OS=Chromohalobacter salexigens ... [more]
PROB_BACC29.097e-1234.43Glutamate 5-kinase OS=Bacillus cereus (strain G984... [more]
PROB_TERTT1.188e-1135.29Glutamate 5-kinase OS=Teredinibacter turnerae (str... [more]
PROB_STRZT1.188e-1137.61Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_STRZP1.188e-1137.61Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_STRZJ1.188e-1137.61Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_STRR61.188e-1137.61Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_STRPN1.188e-1137.61Glutamate 5-kinase OS=Streptococcus pneumoniae GN=... [more]
PROB_STRPJ1.188e-1137.61Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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