DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BACC1 (Glutamate 5-kinase OS=Bacillus cereus (strain ATCC 10987) GN=proB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            L  L  +G E++L++SGAV  G   L Y            +P      +A AAVGQS LM  Y   F +  + ++QLL+T SDF  ++     Y T+  LL+   +PI NEND++S  +  +
Sbjct:   34 LARLKEEGHEVLLITSGAVAAGFSALGYPS----------RPVTIKGKQAAAAVGQSLLMQAYTEEFRKYGIVTAQLLLTRSDFSRKEQYSNAYATLGELLNRSALPIINENDSISLEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BACAN (Glutamate 5-kinase OS=Bacillus anthracis GN=proB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            L  L  +G E++L++SGAV  G   L Y            +P      +A AAVGQS LM  Y   F +  + ++QLL+T SDF  ++     Y T+  LL+   +PI NEND++S  +  +
Sbjct:   34 LARLKEEGHEVLLITSGAVAAGFSALGYPS----------RPVTIKGKQAAAAVGQSLLMQAYTEEFRKYGIVTAQLLLTRSDFSRKEQYSNAYATLGELLNRSALPIINENDSISLEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SALAI (Glutamate 5-kinase OS=Salinispora arenicola (strain CNS-205) GN=proB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            + L  L +QG E++LVSSGA+  G           + L   ++P++    +A A+VGQ  L+  Y   F++  +T  Q+L+T  D       +  Y T++ LLDLR +PI NEND V+T +
Sbjct:   37 DTLGGLAAQGREVVLVSSGAIAAGL----------APLGLTRRPRDLATQQAAASVGQGLLIGRYAAAFARHHLTVGQVLLTVDDMTRRAHYRNAYRTLRKLLDLRAVPIVNENDTVATEE 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PROMM (Glutamate 5-kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=proB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 3
Query:  195 QGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            +G  ++LV+SGAVG+G  RL             Q+P + +  +  AA+GQ  LMALY+   S+   T +Q+L+T SD       +    T++ LLD  V+P+ NENDA+S  +  Y
Sbjct:   38 RGDHVVLVTSGAVGLGCNRLGLS----------QRPVDVVALQGTAAIGQGQLMALYEAAMSRRGHTVAQVLLTRSDLGSRQRYRNASSTLKQLLDWGVLPVVNENDALSPEELRY 143          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PROM4 (Glutamate 5-kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=proB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            + E  ++G + I+VSSGAVG+G  +L ++           +P N  D +A A+VGQ  LM LY    +      +Q+L+T SDF   +  +    T++ LLD  V+PI NENDA++  +  Y
Sbjct:   32 IAESKARGDQHIIVSSGAVGLGCIQLGFK----------DRPNNINDLQAAASVGQVHLMDLYQEYMATFGYKVAQILITRSDFSSRNCYRNASMTLKRLLDWGVLPIVNENDAIANEELLY 143          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_NITOC (Glutamate 5-kinase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=proB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 40/119 (33.61%), Postives = 68/119 (57.14%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            +  L ++G+ I+LVSSG+V  G +RL +R+          +P+   + +A AAVGQ  L+  Y++ F   +  ++Q+L+T  D  +         T+++LL L V+PI NEND V+T +
Sbjct:   42 IARLRNKGYTIVLVSSGSVAAGMERLGWRR----------RPRALYELQAAAAVGQMGLIQAYESEFQHHNQHTAQILLTHEDLANRSRYLNARSTLRTLLRLGVVPIVNENDTVATEE 150          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_METMA (Glutamate 5-kinase OS=Methanosarcina mazei GN=proB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q+ EL  QG E+I+VSSGA+GVG           + L    KP+     +A AAVGQS LM  +   FS+  +  +Q+L+T   + D      L +++ +LL+  V+PI NEND   T +
Sbjct:   48 QVSELRKQGKEVIIVSSGAIGVGL----------NELGIAPKPREIPIRQAAAAVGQSMLMQDWSRAFSRYGMKVAQILLTYEFYSDRVTYLNLRNSISTLLEYGVVPIINENDCTCTNE 157          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BACCR (Glutamate 5-kinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=proB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 42/122 (34.43%), Postives = 62/122 (50.82%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            L  L   G E++L++SGAV  G   L Y            +P      +A AAVGQS LM  Y   F +  + ++QLL+T SDF  ++     Y T+  LL+   +PI NEND++S  +  +
Sbjct:   34 LARLKEDGHEVVLITSGAVAAGFSALGYPS----------RPVTIKGKQAAAAVGQSLLMQAYTEEFRKYGIVTAQLLLTRSDFSRKEQYSNAYATLGELLNRSALPIINENDSISLEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BACC4 (Glutamate 5-kinase OS=Bacillus cereus (strain B4264) GN=proB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 42/122 (34.43%), Postives = 62/122 (50.82%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            L  L   G E++L++SGAV  G   L Y            +P      +A AAVGQS LM  Y   F +  + ++QLL+T SDF  ++     Y T+  LL+   +PI NEND++S  +  +
Sbjct:   34 LARLKEDGHEVVLITSGAVAAGFSALGYPS----------RPVTIKGKQAAAAVGQSLLMQAYTEEFRKYGIVTAQLLLTRSDFSRKEQYSNAYATLGELLNRSALPIINENDSISLEELTF 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_THISH (Glutamate 5-kinase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=proB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            EQ+  L + G E++LVSSGAV  G  RL +    ++ L +LQ         A AAVGQ  L+  Y+++F +  + ++Q+L+T  D  +         T+++LL L VIP+ NEND V+T
Sbjct:   40 EQIARLRASGREVVLVSSGAVAEGMSRLGWTTRPHA-LHELQ---------AAAAVGQMGLVQAYESIFQRHGLRAAQVLLTHDDLSNRRRYLNARSTLRTLLALGVIPVVNENDTVAT 148          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_BACC11.188e-1134.43Glutamate 5-kinase OS=Bacillus cereus (strain ATCC... [more]
PROB_BACAN1.188e-1134.43Glutamate 5-kinase OS=Bacillus anthracis GN=proB P... [more]
PROB_SALAI1.552e-1134.71Glutamate 5-kinase OS=Salinispora arenicola (strai... [more]
PROB_PROMM1.552e-1136.21Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_PROM41.552e-1135.25Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_NITOC1.552e-1133.61Glutamate 5-kinase OS=Nitrosococcus oceani (strain... [more]
PROB_METMA1.552e-1136.67Glutamate 5-kinase OS=Methanosarcina mazei GN=proB... [more]
PROB_BACCR1.552e-1134.43Glutamate 5-kinase OS=Bacillus cereus (strain ATCC... [more]
PROB_BACC41.552e-1134.43Glutamate 5-kinase OS=Bacillus cereus (strain B426... [more]
PROB_THISH2.027e-1136.97Glutamate 5-kinase OS=Thioalkalivibrio sp. (strain... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
back to top