DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PROMT (Glutamate 5-kinase OS=Prochlorococcus marinus (strain NATL2A) GN=proB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            + +    G +IILVSSGAVG+G  ++R++           +P+  +  +A AA+GQ  LMALY+   S      +Q+L+T S+    +       T++ LL+  VIPI NEND  S  +  Y
Sbjct:   32 ISKAQRNGDKIILVSSGAVGLGCHQMRFKT----------RPKEIISLQASAAIGQLHLMALYEKAMSSFGYKVAQILLTRSELGSRNSYNSASQTLKRLLEWDVIPIVNENDITSDEELKY 143          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_LISMF (Glutamate 5-kinase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=proB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            L +L ++G E+ILVSSGA+GVG  +L+   +  +S+ DLQ         A A+VGQS LM +Y   F +      Q+L+T         R+ + +T+ SLL   +IPI NEND V+  +
Sbjct:   39 LSDLRNEGKEVILVSSGAIGVGCHKLQL-SVRPTSIPDLQ---------AVASVGQSELMHIYSKFFGEYGQVVGQVLLTRDVTDFPISRENVMNTLDSLLSRGIIPIVNENDTVAVEE 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_LISMC (Glutamate 5-kinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=proB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            L +L ++G E+ILVSSGA+GVG  +L+   +  +S+ DLQ         A A+VGQS LM +Y   F +      Q+L+T         R+ + +T+ SLL   +IPI NEND V+  +
Sbjct:   39 LSDLRNEGKEVILVSSGAIGVGCHKLQL-SVRPTSIPDLQ---------AVASVGQSELMHIYSKFFGEYGQVVGQVLLTRDVTDFPISRENVMNTLDSLLSRGIIPIVNENDTVAVEE 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BORA1 (Glutamate 5-kinase OS=Bordetella avium (strain 197N) GN=proB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L+ QG +++LVSSGA+  G  RL +RK          +P    + +A AAVGQ  L   Y+  F++  + ++Q+L+T  D  D         T+ +LL + V+PI NEND V T
Sbjct:   42 QIAALHKQGRQVVLVSSGAIAEGMARLGWRK----------RPSVMHELQAAAAVGQMGLCQAYEAAFAEHGLRTAQILLTHEDLADRHRYLNARSTLFALLRMGVVPIVNENDTVVT 149          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BACSK (Glutamate 5-kinase OS=Bacillus clausii (strain KSM-K16) GN=proB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            E + EL  QG  +I+V+SGAV  G   + Y           Q+P++    +A AAVGQS LM  Y   F     T++QLL+T +DF D      +  T++ LL    IP+ NEND+ S
Sbjct:   32 EAICELRHQGINVIVVTSGAVAAGFTLIGYH----------QRPKSISQKQAAAAVGQSLLMQAYMDAFRLHGYTAAQLLLTRADFADPARFSNISQTLRELLKRGAIPVINENDSTS 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB1_PSEHT (Glutamate 5-kinase 1 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=proB1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 3
Query:  192 SQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            ++G E+ILVSSG+V  G           + L      ++ +  KA AA GQ+ ++A++D  F   D  S+QLL+T  D RD +  + + +TV +LL+  V+PI NENDAV+T
Sbjct:   42 ARGIEVILVSSGSVAAG-----------AHLFPSDTARSVVMKKAMAAAGQTEMIAMWDRFF---DFPSAQLLLTHGDLRDHERYQSIRETVFTLLEHGVLPIINENDAVTT 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_THEPX (Glutamate 5-kinase OS=Thermoanaerobacter sp. (strain X514) GN=proB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 38/117 (32.48%), Postives = 67/117 (57.26%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            Q+  L ++G E++LV+SGA+G G  +L  +          +KP+   + ++ AA+GQ  L+ +Y+  F++    ++Q+L+T  DF D      +  T+ +LL   V+PI NEND V+
Sbjct:   30 QIANLLNRGEEVVLVTSGAIGAGMGKLNLK----------EKPKTIPEKQSLAAIGQGLLIEIYEKFFNEYGKITAQVLLTKEDFSDRRRYLNVSYTLSNLLKWGVVPIINENDTVT 136          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_THEP3 (Glutamate 5-kinase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=proB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 38/117 (32.48%), Postives = 67/117 (57.26%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            Q+  L ++G E++LV+SGA+G G  +L  +          +KP+   + ++ AA+GQ  L+ +Y+  F++    ++Q+L+T  DF D      +  T+ +LL   V+PI NEND V+
Sbjct:   30 QIANLLNRGEEVVLVTSGAIGAGMGKLNLK----------EKPKTIPEKQSLAAIGQGLLIEIYEKFFNEYGKITAQVLLTKEDFSDRRRYLNVSYTLSNLLKWGVVPIINENDTVT 136          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_OCEIH (Glutamate 5-kinase OS=Oceanobacillus iheyensis GN=proB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 45/116 (38.79%), Postives = 61/116 (52.59%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            L  L+   FE+ILVSSGAV  G + L Y            +P      +A AA+GQ  L+  Y   F + ++ S+QLL+T SDF  +   K    T+  LL+  VIPI NEND V+
Sbjct:   34 LAMLHQHNFEVILVSSGAVAAGFRNLGYSS----------RPVTLKGKQASAAIGQGLLIHTYMDKFMEYNIRSAQLLLTRSDFSVQKRYKNATSTMLELLERGVIPIINENDTVA 139          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_NEIG2 (Glutamate 5-kinase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=proB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 45/120 (37.50%), Postives = 62/120 (51.67%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            QL  L+  G E++LVSSGAV  G   L ++K          +P    D +A AAVGQ  LM  Y    S   + S+Q+L++ +DF D+   +     +  LL  R IPI NEND VS  +
Sbjct:   33 QLAALHRAGHELVLVSSGAVAAGFGALGFKK----------RPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGALSVLLQRRAIPIINENDTVSVEE 142          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_PROMT2.027e-1134.43Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_LISMF2.027e-1137.82Glutamate 5-kinase OS=Listeria monocytogenes serot... [more]
PROB_LISMC2.027e-1137.82Glutamate 5-kinase OS=Listeria monocytogenes serot... [more]
PROB_BORA12.027e-1135.59Glutamate 5-kinase OS=Bordetella avium (strain 197... [more]
PROB_BACSK2.027e-1137.29Glutamate 5-kinase OS=Bacillus clausii (strain KSM... [more]
PROB1_PSEHT2.027e-1138.39Glutamate 5-kinase 1 OS=Pseudoalteromonas haloplan... [more]
PROB_THEPX2.647e-1132.48Glutamate 5-kinase OS=Thermoanaerobacter sp. (stra... [more]
PROB_THEP32.647e-1132.48Glutamate 5-kinase OS=Thermoanaerobacter pseudetha... [more]
PROB_OCEIH2.647e-1138.79Glutamate 5-kinase OS=Oceanobacillus iheyensis GN=... [more]
PROB_NEIG22.647e-1137.50Glutamate 5-kinase OS=Neisseria gonorrhoeae (strai... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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