DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRA3 (Glutamate 5-kinase OS=Streptococcus agalactiae serotype III GN=proB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            +  L ++G E+ILVSSGA+G G   L+  K          +PQ     +A ++VGQ ++M+LY  +FS      SQ+L+T       +  + + ++ +SLL + ++PI NENDAVS
Sbjct:   39 ISSLMNRGMEVILVSSGAMGFGLDILKMDK----------RPQEISQQQAVSSVGQVAMMSLYSQIFSHYQTHVSQILLTRDVVVFPESLQNVTNSFESLLSMGILPIVNENDAVS 144          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_STRA1 (Glutamate 5-kinase OS=Streptococcus agalactiae serotype Ia GN=proB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 524
            +  L ++G E+ILVSSGA+G G   L+  K          +PQ     +A ++VGQ ++M+LY  +FS      SQ+L+T       +  + + ++ +SLL + ++PI NENDAVS
Sbjct:   39 ISSLMNRGMEVILVSSGAMGFGLDILKMDK----------RPQEISQQQAVSSVGQVAMMSLYSQIFSHYQTHVSQILLTRDVVVFPESLQNVTNSFESLLSMGILPIVNENDAVS 144          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_METAC (Glutamate 5-kinase OS=Methanosarcina acetivorans GN=proB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            Q+ EL   G E+ILVSSGA+GVG           + L    KP+     +A AAVGQS LM  +   FS+  +  +Q+L+T   + D      L +++ +LL+  V+PI NEND   T +
Sbjct:   48 QVYELRKHGKEVILVSSGAIGVGL----------NELGIAPKPREIPIRQAAAAVGQSILMQDWSRAFSKYGMKVAQILLTYEFYSDRVTYLNLRNSISTLLEYEVVPIINENDCTCTNE 157          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_CLAM3 (Glutamate 5-kinase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=proB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            + +  ++++G E++LVSSGA+  G   LR    ++   ADL   Q      A AAVGQS L+  Y     +  + + Q+L+T  D    D R+     ++ LL LR++PI NEND V+T +
Sbjct:   37 DAIASVHARGAEVVLVSSGAIATGMPFLR----LDDRPADLATQQ------AAAAVGQSVLIFRYQESLDRYGIVAGQVLLTAGDLAAPDHRENAQRAMERLLGLRLLPIVNENDTVATHE 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_VARPS (Glutamate 5-kinase OS=Variovorax paradoxus (strain S110) GN=proB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            QL  L   G E+++VSSGA+  G +RL +R           +P    + +A AAVGQ  L  +Y+T   +  + S+Q+L+T +D  D +       T+ +LL L V+P+ NEND V
Sbjct:   43 QLAVLVQGGREVVMVSSGAIAEGMKRLGWRT----------RPHEVHELQAAAAVGQMGLAQMYETKLRENRIGSAQVLLTHADLADRERYLNARSTLVTLLGLGVVPVINENDTV 148          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_LEPIN (Glutamate 5-kinase OS=Leptospira interrogans GN=proB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 41/122 (33.61%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            ++ L   G ++ILVSSGA+  GR  L       SS   L + Q      A AA+GQ+ L+ LYD+ FS+++++ +Q+L    D   ++  K L +T   L++  ++P+ NEND+V+T +  +
Sbjct:   45 IRHLRDLGKKVILVSSGAIARGRLLLSELPSTISSGDSLAEKQ------ALAAMGQNRLVNLYDSFFSKVNLSIAQILFGVLDLESKEGYKNLKNTFTQLVEWGILPVVNENDSVATEEVKF 160          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_LEPIC (Glutamate 5-kinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=proB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 41/122 (33.61%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  177 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            ++ L   G ++ILVSSGA+  GR  L       SS   L + Q      A AA+GQ+ L+ LYD+ FS+++++ +Q+L    D   ++  K L +T   L++  ++P+ NEND+V+T +  +
Sbjct:   45 IRHLRDLGKKVILVSSGAIARGRLLLSELPSTISSGDSLAEKQ------ALAAMGQNRLVNLYDSFFSKVNLSIAQILFGVLDLESKEGYKNLKNTFTQLVEWGILPVVNENDSVATEEVKF 160          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_LEIXX (Glutamate 5-kinase OS=Leifsonia xyli subsp. xyli GN=proB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 40/121 (33.06%), Postives = 67/121 (55.37%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 533
            + L E + +G +++LVSSGA+  G   + Y       LA  ++P++    +A AAVGQ+ L+  Y     +  + + Q+L+T  D  +   R      ++ LLDLR++PI NEND V+T +
Sbjct:   37 DALAEAHGRGSQVVLVSSGAIATG---IPY-------LALTERPKDLATQQAAAAVGQNVLIYRYQDSLDRYGIVAGQVLLTARDVENPTHRSNAKRAMERLLDLRILPIVNENDTVATHE 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PSEMY (Glutamate 5-kinase OS=Pseudomonas mendocina (strain ymp) GN=proB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            +Q+  L  QG E++LVSSGAV  G  RL +     S++ +LQ         A AA+GQ +L+  +++ F++    ++Q+L+T  D  D         T+++L+ L VIP+ NEND V T
Sbjct:   37 KQMVALREQGVELVLVSSGAVAAGMSRLGWTSRP-SAMHELQ---------AAAAIGQMALVQAWESSFAEHGRRTAQILLTHDDLSDRKRYLNARSTLRTLVGLDVIPVINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_LARHH (Glutamate 5-kinase OS=Laribacter hongkongensis (strain HLHK9) GN=proB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            ++ +L  +G E++LVSSGA+  G +RL +            KP    + +A AAVGQ  L   Y+ +F+  ++ ++Q+L+T  D  D         T+ +LL L V+PI NEND V T
Sbjct:   38 EIADLMRRGKEVVLVSSGAIAEGIKRLGWSA----------KPSAVHEKQAAAAVGQMGLCEAYERVFTAHNLKTAQVLLTHEDMADRTRYLNARTTLLTLLSLNVVPIINENDTVVT 145          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_STRA34.515e-1135.34Glutamate 5-kinase OS=Streptococcus agalactiae ser... [more]
PROB_STRA14.515e-1135.34Glutamate 5-kinase OS=Streptococcus agalactiae ser... [more]
PROB_METAC4.515e-1136.67Glutamate 5-kinase OS=Methanosarcina acetivorans G... [more]
PROB_CLAM34.515e-1134.71Glutamate 5-kinase OS=Clavibacter michiganensis su... [more]
PROB_VARPS5.897e-1135.34Glutamate 5-kinase OS=Variovorax paradoxus (strain... [more]
PROB_LEPIN5.897e-1133.61Glutamate 5-kinase OS=Leptospira interrogans GN=pr... [more]
PROB_LEPIC5.897e-1133.61Glutamate 5-kinase OS=Leptospira interrogans serog... [more]
PROB_LEIXX5.897e-1133.06Glutamate 5-kinase OS=Leifsonia xyli subsp. xyli G... [more]
PROB_PSEMY7.701e-1135.29Glutamate 5-kinase OS=Pseudomonas mendocina (strai... [more]
PROB_LARHH7.701e-1134.75Glutamate 5-kinase OS=Laribacter hongkongensis (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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