DY259756

Overview
NameDY259756
Unique NameDY259756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length996
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 6.350e-54
Identity = 91/215 (42.33%), Postives = 139/215 (64.65%), Query Frame = 2
Query:    2 YWSYLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIP 646
            + SY ++P YNA+R+ MTL+  + FG ++W +G+      DL NL GA Y+   FLG +N ++++PV+ VERTV+YRE+AAGM++ + YA AQ                    +MIG++W+  KF  F +FM A+F  FTL+ MM+VA T  + +A +++SF LS WN F+GF++ R  IPVWWRW+YW +PV+W +YG++  Q  D + +V +P
Sbjct: 1187 FQSYWKDPPYNAMRYVMTLLYGLVFGTVFWRRGKNIESVNDLNNLLGATYAAVFFLGAANLLTLLPVVSVERTVFYREKAAGMYSPLSYAFAQGFVEFCYSAVQGVLYTILIYSMIGYEWKADKFFYFLFFMIAAFAYFTLFSMMLVACTASEMLAAVLVSFVLSSWNNFAGFIIPRPLIPVWWRWFYWANPVSWTIYGVIASQFADSDRVVTVP 1401          
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.415e-53
Identity = 95/207 (45.89%), Postives = 131/207 (63.29%), Query Frame = 2
Query:    8 SYLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLE 628
            SY RNPQY A+RF  T++I++ FG I W  G +   Q D+ N  GAMY+  +F+G +NA SV PVI +ER V YRERAAGM++A+P+A + V                   ++  F+W   KF  + +FM+ + + FT YGMM  A+TP   VA I+ + F ++WNLF GF++ R  IP WWRWYYW +PV+W LYGL+T Q GDL+
Sbjct: 1185 SYWRNPQYTAVRFFYTVIISLMFGTICWKFGSRRETQHDIFNAMGAMYAAVLFIGITNATSVQPVISIERFVSYRERAAGMYSALPFAFSLVTVEFPYILVQSLIYGTIFYSLGSFEWTAVKFLWYLFFMYFTLLYFTFYGMMTTAITPNHTVAPIIAAPFYTLWNLFCGFMIPRKRIPAWWRWYYWANPVSWTLYGLLTSQFGDLD 1391          
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.261e-50
Identity = 95/215 (44.19%), Postives = 135/215 (62.79%), Query Frame = 2
Query:   11 YLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQV---AXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIP 646
            Y R+P+YN +R   T V AI FG I+W+ G K    +D+  L GA+Y+ C+FLG +NA SV PV+ VERTVYYRERAA M+++ PYA AQV                       M+ ++  + K  L+  +M+ +F  FT YGM+ V LTP Q +A++V S F S+WNL SGFL+ +S IP WW W+Y++ PVAW L G++T Q+GD+++ +  P
Sbjct: 1176 YWRSPEYNVVRLFFTSVAAIIFGSIFWNVGMKRESTEDILLLMGALYAACLFLGVNNASSVQPVVSVERTVYYRERAANMYSSFPYAAAQVYHGLVEIPYIAVQTLIFGLITYFMVNYERNIRKLVLYLIYMFLTFTYFTFYGMVAVGLTPTQHMASVVSSAFYSLWNLLSGFLIPQSRIPGWWIWFYYICPVAWTLRGVITSQLGDVDTRIVGP 1390          
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.761e-49
Identity = 91/214 (42.52%), Postives = 135/214 (63.08%), Query Frame = 2
Query:    2 YWSYLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEI 643
            YWSY R+P YN +R    L  ++  GL++WDKG+K   QQ + ++FGAM++  IF G +N+ SV+P +  ER+V YRER AGM+A+  YALAQVA                   MIG+ W   K   +FY M+ + + FT  GMM+V++TP   VA I+ S F +++NLF+GFL+ ++ IP WW W+Y+L+P +W L G++T Q GD+E  + +
Sbjct: 1182 YWSYWRSPSYNLMRSLHMLFASLVSGLLFWDKGKKLDNQQSVFSVFGAMFTAVIFCGINNSSSVLPYVTTERSVLYRERFAGMYASWAYALAQVAIEIPYLLAQALAFTVITYPMIGYYWSAYKVFWYFYSMFCTLLYFTYLGMMLVSMTPSFPVAAILQSSFYTMFNLFAGFLMPKAQIPKWWIWFYYLTPTSWTLNGMLTSQYGDIEKEITV 1395          
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.622e-41
Identity = 78/211 (36.97%), Postives = 124/211 (58.77%), Query Frame = 2
Query:    8 SYLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVE 640
            SY RN  YNA+RF     + I +G+I+W  G++   +QD+ N  GAM ++  FL + +A +V PV+  ERTV+YRE  AGM++A+PYA +QV                    MIG++W   KF L  +F + S +     G+M+++++P Q++A+I+     + WN+FSGF + R  + VW RW+ ++ P  W LYGL   Q GD+E+ ++
Sbjct: 1158 SYWRNVPYNAVRFSFGAAVGIMYGIIFWSLGKRKGTRQDIFNSVGAMSTVVGFLSSQSAATVRPVVIAERTVFYREAGAGMYSALPYAFSQVIIEIPYTMAQACIYGVIVYGMIGYEWTASKFFLNIFFTFISILYSIYTGIMVISVSPNQEIASILNGVISTSWNVFSGFTIPRPRMHVWLRWFTYVCPGWWGLYGLTIAQYGDVETRLD 1368          
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.590e-39
Identity = 80/212 (37.74%), Postives = 115/212 (54.25%), Query Frame = 2
Query:    8 SYLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEI 643
            SY R+P YN +R   TLV ++ FG ++W +GQ    QQ +  +FGA+Y + +FLG +N  S +     ER V YRER AGM++A  YAL QV                    MIGF     K     Y M+ S + F    M +V++TP   VA I+ S F   +NLFSGFL+ ++ +P WW W Y+L+P +W L G ++ Q GD+   + +
Sbjct: 1187 SYWRSPSYNLMRMMHTLVSSLIFGALFWKQGQNLDTQQSMFTVFGAIYGLVLFLGINNCASALQYFETERNVMYRERFAGMYSATAYALGQVVTEIPYIFIQAAEFVIVTYPMIGFYPSAYKVFWSLYSMFCSLLTFNYLAMFLVSITPNFMVAAILQSLFYVGFNLFSGFLIPQTQVPGWWIWLYYLTPTSWTLNGFISSQYGDIHEEINV 1398          
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.383e-39
Identity = 75/210 (35.71%), Postives = 116/210 (55.24%), Query Frame = 2
Query:    8 SYLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLV 637
            SY R+P YN +R G T + +  FGL++W++G+K   QQ+L  + GA+Y + +F+G +N  S +     ER V YRER AGM++A  YALAQV                    MIGF     K     Y M+ + + F    M ++++TP   VA I+ S F + +N+F+GFL+ +  IP WW W+Y+++P +W L    + Q GD+   +
Sbjct: 1150 SYWRSPSYNLMRIGHTFISSFIFGLLFWNQGKKIDTQQNLFTVLGAIYGLVLFVGINNCTSALQYFETERNVMYRERFAGMYSAFAYALAQVVTEIPYIFIQSAEFVIVIYPMIGFYASFSKVFWSLYAMFCNLLCFNYLAMFLISITPNFMVAAILQSLFFTTFNIFAGFLIPKPQIPKWWVWFYYITPTSWTLNLFFSSQYGDIHQKI 1359          
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.418e-39
Identity = 74/207 (35.75%), Postives = 121/207 (58.45%), Query Frame = 2
Query:    8 SYLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLE 628
            SY RNP YN  R        +  G+++W K ++ + QQDL N+FG+M+++ +F G +N  +V+  +  ER V+YRER + M+ +  Y+LAQV                    M+G+ W + K    FY ++ + +IF  +GM++V +TP   +A  + S F ++ NLF+G+++ + +IP WW W Y+LSP +W L GL+T Q GD+E
Sbjct: 1129 SYWRNPSYNLTRIIFMSFTCMLCGILFWQKAKEINNQQDLFNVFGSMFTVVLFSGINNCSTVLFSVATERNVFYRERFSRMYNSWAYSLAQVLVEIPYSLFQSIVYVIIVYPMVGYHWSVFKVFWSFYSIFCTLLIFNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDME 1335          
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.740e-38
Identity = 75/207 (36.23%), Postives = 119/207 (57.49%), Query Frame = 2
Query:    8 SYLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLE 628
            SY RNP YN  R        +  G+++  K ++ + QQDL N+FG+M+++ +F G +N  +VI  +  ER V+YRER + M+    Y+LAQV                    M+G+ W + K    FY ++ S +IF  +GM++V +TP   +A  + S F ++ NLF+G+++ + +IP WW W Y+LSP +W L GL+T Q GD+E
Sbjct: 1127 SYWRNPSYNLTRIIFMCFTCMLCGILFLQKAKEINNQQDLFNVFGSMFTVVLFSGINNCSTVIFCVATERNVFYRERFSRMYNPWAYSLAQVLVEIPYSLFQSIIYVIIVYPMVGYHWSVYKVFWSFYSIFCSLLIFNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDME 1333          
BLAST of DY259756 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.740e-38
Identity = 79/212 (37.26%), Postives = 121/212 (57.08%), Query Frame = 2
Query:    8 SYLRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEI 643
            SY RNP +N  R    L+ ++   L++W K +  + QQDL ++FG+MY+I IF G +N  +V+  I  ER V+YRER A M+++  Y+ +QV                    MIG+   + K     Y ++ S +IF   GM++VALTP   +A  + S F S+ NLF+GF++ +  IP WW W Y+LSP +W L GL++ Q GD+E  + +
Sbjct: 1134 SYWRNPSHNLTRIVFILLNSLLCSLLFWQKAKDINNQQDLFSIFGSMYTIVIFSGINNCATVMNFIATERNVFYRERFARMYSSWAYSFSQVLVEVPYSLLQSLLCTIIVYPMIGYHMSVYKMFWSLYSIFCSLLIFNYCGMLMVALTPNIHMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVEKEITV 1345          
The following BLAST results are available for this feature:
BLAST of DY259756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
PDR5_ORYSJ6.350e-5442.33Pleiotropic drug resistance protein 5 OS=Oryza sat... [more]
PDR6_ORYSJ1.415e-5345.89Pleiotropic drug resistance protein 6 OS=Oryza sat... [more]
PDR13_ORYSJ3.261e-5044.19Pleiotropic drug resistance protein 13 OS=Oryza sa... [more]
PDR3_TOBAC2.761e-4942.52Pleiotropic drug resistance protein 3 OS=Nicotiana... [more]
AB38G_ARATH1.622e-4136.97ABC transporter G family member 38 OS=Arabidopsis ... [more]
AB37G_ARATH2.590e-3937.74ABC transporter G family member 37 OS=Arabidopsis ... [more]
AB33G_ARATH3.383e-3935.71ABC transporter G family member 33 OS=Arabidopsis ... [more]
AB42G_ARATH4.418e-3935.75ABC transporter G family member 42 OS=Arabidopsis ... [more]
AB43G_ARATH3.740e-3836.23ABC transporter G family member 43 OS=Arabidopsis ... [more]
AB41G_ARATH3.740e-3837.26ABC transporter G family member 41 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259756 ID=DY259756; Name=DY259756; organism=Citrus clementina; type=EST; length=996bp
GTATTGGTCTTATTTGAGAAACCCTCAGTACAATGCTATCCGATTTGGCA
TGACTCTTGTCATTGCCATTTTCTTTGGTTTAATCTACTGGGACAAAGGA
CAGAAGACTTCCAAACAACAAGATCTGCAGAATCTTTTTGGAGCTATGTA
TTCTATTTGTATTTTCCTTGGAACCAGCAATGCCATATCCGTGATACCCG
TTATCTGCGTTGAGAGAACAGTATACTACCGTGAAAGAGCCGCAGGGATG
TTTGCTGCAATGCCTTATGCACTTGCTCAAGTAGCCGTAGAGATAATATA
TGTATCAGTTCAAAGTGTCGTGTATGTTCTTATCCTTTACGCGATGATTG
GATTCAAGTGGGAGCTGGGAAAATTCTGCTTGTTCTTCTACTTCATGTGG
GCGTCTTTTATCATTTTCACATTGTACGGAATGATGATTGTCGCATTGAC
TCCTGGCCAGCAAGTTGCTACCATTGTCTTGTCCTTCTTCCTTAGTGTAT
GGAACTTGTTCTCCGGTTTCCTCGTTGCCAGATCGGATATTCCTGTCTGG
TGGAGGTGGTACTACTGGCTTTCTCCGGTGGCTTGGAATCTGTATGGCCT
TGTGACTTGTCAAGTTGGTGACTTAGAGTCACTTGTGGAGATTCCCTGAT
GGTAATAAATACTAAAATGACAGTGAAACCATTCATCCAAGATAATTATG
ATTTCAGAAAGATTTCATTCCTGTCGTTAATACCAGCCCATTGGCTGGAT
GGCCGTGTTCCTGGTTGGGTTTGCCCATGCCCACCAAGGCATTCACCTTC
CAAAGGAAAAAAACCCACCTCAATTCTTAAAAAAGGAACAACCAACCGAA
CCCGGTGGGGAAAACAAAAGGTATCCCACTTTTTTTTTCCCTTCGAACTT
CCCCTTTTTCACTTATATAATTTACTTTCGAAACACAAAATGAAGGTTTC
AAAAGGACCTCACGCCAACAAAACAAACCAAAAAATCTCTACCGAA
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