DY259758

Overview
NameDY259758
Unique NameDY259758
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1070
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12465 contig Ccv1_Contig12465:798..1867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_ERWCT (Methylthioribose kinase OS=Erwinia carotovora subsp. atroseptica GN=mtnK PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.895e-20
Identity = 59/164 (35.98%), Postives = 84/164 (51.22%), Query Frame = 1
Query:    1 QALIH*DLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDG-----HAAEGNDRKEYKEWILRTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCER 477
            +AL+H D+H+GS+ V     +VID EF FYGPMGFDIG  +GNL+L +    G      AA G +R+      L  I   W  F  +F AL     D    A     Y            F++ ++ D +GF   ++IRR +G+AHV D +SI++   R  C+R
Sbjct:  223 EALLHGDIHSGSIFVAEGRLKVIDAEFGFYGPMGFDIGTAIGNLLLNYCGLPGLLAPREAAAGRERR------LEDIRTLWQTFSARFLAL--SESDCREPALAESGY---------AALFLQQVWLDAIGFCGTELIRRTIGLAHVVDLDSIQETDARLACQR 369          
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_CITK8 (Methylthioribose kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mtnK PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 6.643e-20
Identity = 57/190 (30.00%), Postives = 95/190 (50.00%), Query Frame = 1
Query:    1 QALIH*DLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDGHAAEGNDRKEYKEWILRTIEETWTLFHQKFTAL-WHQHKDGSGEA--YLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCERQXXXXXXXXXXXXXNFQAITEVVSAIRK 561
            +AL+H D+H+GS+ V     + ID EF ++GP+GFD+G  +GNL+L F    GH     D    +E  L  I+E W  F ++F  L   + +D +  A  Y  E              F+K ++ D +GF   ++IRR VG++HV D ++I+D   R  C R                +++  +++ +R+
Sbjct:  223 EALLHGDIHSGSIFVADGRLKAIDAEFGYFGPIGFDVGTAIGNLLLNFCGLPGHLGI-RDAAAAREQRLTDIQELWNTFAERFQVLATEKTRDAALRAPGYASE--------------FLKKVWADAIGFCGTELIRRSVGLSHVADIDTIQDAEMRHECLRHAITLGKALIVIADRIESVEALIARVRQ 397          
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_GEOTN (Methylthioribose kinase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=mtnK PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.677e-20
Identity = 55/157 (35.03%), Postives = 85/157 (54.14%), Query Frame = 1
Query:    7 LIH*DLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDGHAAEGNDRKEYKEWILRTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCER 477
            L+H DLHTGS+  + + T+VIDPEFAFYGP+GFD+G F+ NL+L   ++          +  +  +   I+ TW +F   F+ LW   +  S E Y       P L     +  ++  F D +GF   ++IRR +G+AHV D + I+   +R   +R
Sbjct:  229 LLHGDLHTGSIFASDDETKVIDPEFAFYGPIGFDLGHFIANLLLNALSRP---------ESERRPLFDHIDRTWAVFTSVFSELW---RTESVETYAA----TPGL----LDDVLRQTFIDAVGFAGCEVIRRTIGLAHVADLDGIEQKDERLAAKR 365          
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_GEOKA (Methylthioribose kinase OS=Geobacillus kaustophilus GN=mtnK PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.677e-20
Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 1
Query:    7 LIH*DLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDGHAAEGNDRKEYKEWILRTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCER 477
            L+H DLHTGS+ V+ + T+VIDPEFAFYGP+GFD+G F  NL+L   ++          +  ++ +   I+ TW +F   F+ LW   +  S E Y       P L     E  ++  F D +GF   ++IRR +G+AHV D + I+   +R   +R
Sbjct:  229 LLHGDLHTGSIFVSADETKVIDPEFAFYGPIGFDLGQFFANLLLNALSRS---------ELERQPLFDHIDRTWDVFASVFSNLW---RTESVETYAA----TPGL----LEDVLRHAFIDAVGFAGCEVIRRTIGLAHVADLDGIEHKDERLVAKR 365          
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_ERWT9 (Methylthioribose kinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=mtnK PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.677e-20
Identity = 54/160 (33.75%), Postives = 87/160 (54.37%), Query Frame = 1
Query:    1 QALIH*DLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDGHAAEGNDRKEYKEWILRTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCERQ 480
            +AL+H D+H+GS+ V   S +VID EF FYGP+GFDIG+ +GNL++++ A  G      +  + +E  L  + + W  F + F AL    K       +P               F+  ++ D++G+   ++IRR VG++ V D + I+DD+ R  C RQ
Sbjct:  223 EALLHGDVHSGSIFVAEGSLKVIDAEFGFYGPIGFDIGSALGNLLISYCAAPG-LLPPREAADAREKRLNDVRQLWQSFAEGFLAL-AAEKSRDRALAVPG----------YASTFLAKIWRDSVGYSGTELIRRTVGMSQVADIKGIQDDAMRVECVRQ 370          
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_EXIS2 (Methylthioribose kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=mtnK PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.525e-19
Identity = 58/158 (36.71%), Postives = 83/158 (52.53%), Query Frame = 1
Query:    4 ALIH*DLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDGHAAEGNDRKEYKEWILRTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCER 477
            AL+H DLHTGS+  +   T+VIDPEFAFYGP GFD+G F+ +L  A +          D    ++  ++ I+  W  F   F ALW +      EA  P  + K +   LV +  +  +  D LGF   ++IRR +G+A V D E I D + R   +R
Sbjct:  219 ALLHGDLHTGSIFASAEETKVIDPEFAFYGPFGFDVGQFIAHLFFAAYP---------DYDRLRDERIKDIDTFWLTFASTFKALWER------EAVEP--FRKAD--GLVDD-VLSTILQDALGFAGCELIRRTIGLALVADLEQISDSTVRLERKR 356          
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_ENTS8 (Methylthioribose kinase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mtnK PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.525e-19
Identity = 56/189 (29.63%), Postives = 96/189 (50.79%), Query Frame = 1
Query:    1 QALIH*DLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDGHAA--EGNDRKEYKEWILRTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCERQXXXXXXXXXXXXXNFQAITEVVSAIRK 561
            +AL+H D+H+GS+ V   S + ID EF ++GP+GFD+G  +GNL+L +    G     E  D +E +   L  I   W  F ++F  L    ++ + +A L E     E        F+K ++ D +GF   ++IRR VG++HV D ++I+D+  + +C R                +   E ++ +R+
Sbjct:  223 EALLHGDIHSGSIFVADGSLKAIDAEFGYFGPVGFDVGTAIGNLLLNYCGAPGQLGIREAADAREQR---LIDIATLWHTFAERFQTL---AREKTRDAALAEPGYASE--------FLKKVWADAIGFAGTELIRRSVGLSHVADIDTIRDEEMKLSCLRHAIGLGKALILLAPRIENADEFIARVRQ 397          
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_BACA2 (Methylthioribose kinase OS=Bacillus amyloliquefaciens (strain FZB42) GN=mtnK PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.525e-19
Identity = 58/186 (31.18%), Postives = 92/186 (49.46%), Query Frame = 1
Query:    1 QALIH*DLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDGHAAEGNDRKEYKEWILRTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCERQXXXXXXXXXXXXXNFQAITEVVSAIR 558
            + L+H DLHTGS+    + T+VIDPEFAF+GP+GFDIG F+ NL+L   ++D     G+DR+     +       W  F + F+  W +         LP        ++ + E  +K+ F + +GF   ++IRR +G+AHV D + I    KR   ++                + ITEV+   +
Sbjct:  227 ETLVHGDLHTGSIFADEHETKVIDPEFAFFGPIGFDIGQFIANLLLNALSRD-----GDDRQP----LYDHTAAVWDTFVKTFSEAWEKD-------CLPS-------RRHLLEDTLKNAFEEAVGFAGCELIRRTIGLAHVADLDEITPFDKRIERKKLALDIGAYYIENRKELKHITEVLDQFK 389          
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_PECCP (Methylthioribose kinase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mtnK PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.297e-19
Identity = 54/164 (32.93%), Postives = 85/164 (51.83%), Query Frame = 1
Query:    1 QALIH*DLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDG-----HAAEGNDRKEYKEWILRTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCER 477
            +AL+H D+H+GS+ V     + ID EF FYGP+GFD+G  +GNL+L +    G      AA G +R+      L  I   W  F  +F AL         E+  P +      +      F++ ++ D +G+   ++IRR +G+AHV D +SI++   R  C+R
Sbjct:  223 EALLHGDIHSGSIFVAEGRLKAIDAEFGFYGPIGFDVGTAIGNLLLNYCGLPGLLAPREAAAGRERR------LEDIRTLWQTFSARFLAL------SDNESRDPAL-----AESGYAALFLQQVWRDAVGYCGTELIRRTIGLAHVADLDSIQETEARLACQR 369          
BLAST of DY259758 vs. ExPASy Swiss-Prot
Match: MTNK_BACLD (Methylthioribose kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=mtnK PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 9.593e-19
Identity = 60/194 (30.93%), Postives = 93/194 (47.94%), Query Frame = 1
Query:    1 QALIH*DLHTGSVMVTPNS-TQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDGHAAEGNDRKEYKEWILRTIEETWTLFHQKFTALWH-------QHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVEDFESIKDDSKRATCERQXXXXXXXXXXXXXNFQAITEVVSAIR 558
            + LIH DLHTGS+    +  T++IDPEFAF+GP+GFDIG F+ NL+L     +  + E N R      + R +E  W  F + F+  W        +H++G  E+ L                  +  F D  GF   +MIRR +G+AHV D ++I   S+R + ++               F+   +++ A R
Sbjct:  227 ETLIHGDLHTGSIFAGEDGETKIIDPEFAFFGPIGFDIGQFIANLLL-----NALSREENRRAP----LYRHVETVWNTFSRTFSEAWENDAVETCKHENGRLESVL------------------RQAFEDAAGFAGCEMIRRTIGLAHVADLDTIVPFSRRISQKKLALKIGAAFIEKRSGFRTPKDMIEAFR 393          
The following BLAST results are available for this feature:
BLAST of DY259758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
MTNK_ERWCT3.895e-2035.98Methylthioribose kinase OS=Erwinia carotovora subs... [more]
MTNK_CITK86.643e-2030.00Methylthioribose kinase OS=Citrobacter koseri (str... [more]
MTNK_GEOTN8.677e-2035.03Methylthioribose kinase OS=Geobacillus thermodenit... [more]
MTNK_GEOKA8.677e-2036.31Methylthioribose kinase OS=Geobacillus kaustophilu... [more]
MTNK_ERWT98.677e-2033.75Methylthioribose kinase OS=Erwinia tasmaniensis (s... [more]
MTNK_EXIS22.525e-1936.71Methylthioribose kinase OS=Exiguobacterium sibiric... [more]
MTNK_ENTS82.525e-1929.63Methylthioribose kinase OS=Enterobacter sakazakii ... [more]
MTNK_BACA22.525e-1931.18Methylthioribose kinase OS=Bacillus amyloliquefaci... [more]
MTNK_PECCP3.297e-1932.93Methylthioribose kinase OS=Pectobacterium carotovo... [more]
MTNK_BACLD9.593e-1930.93Methylthioribose kinase OS=Bacillus licheniformis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259758 ID=DY259758; Name=DY259758; organism=Citrus clementina; type=EST; length=1070bp
CAAGCCCTGATACATTGAGATCTCCACACTGGCTCTGTTATGGTCACTCC
TAATTCAACTCAGGTTATAGATCCAGAATTTGCATTTTATGGACCAATGG
GTTTTGACATTGGAGCTTTTGTTGGAAACTTGATTTTGGCCTTTTTTGCC
CAAGATGGACATGCTGCTGAAGGGAATGACAGGAAAGAGTATAAGGAGTG
GATTTTGAGGACAATTGAAGAGACTTGGACTCTGTTCCACCAGAAGTTCA
CTGCACTTTGGCATCAACACAAGGATGGTTCTGGTGAGGCATACCTTCCA
GAAATTTATAACAAACCTGAGCTTCAGCAGCTTGTGCAAGAAAAATTTAT
GAAAGATCTATTCCATGACACCCTTGGATTTGGTGCTGCCAAAATGATAA
GGAGGATTGTCGGTGTAGCCCATGTTGAGGATTTTGAATCAATTAAGGAT
GATAGCAAGCGAGCAACTTGTGAGCGGCAAGCTCTCGAACTGGCAAAGTT
GCTTCTCAAAGAAAGGCGGAATTTCCAGGCCATCACTGAAGTGGTCTCAG
CGATTCGGAAGCTCCATGCGTAAATTAGTGAATTTTAATGGTTTGCTTAA
TATAGTAAGGTTTCATCAAATAGTTGGTTTCACACTGCCGATAATATTTT
GGTTGTCGTCATTATGATGGCTTGTTTTATGTCACATAATAATAAAAATT
GTTGTTACCCTTTGACCCTAAAAAAAAAAAAAAAAAAAAAACCCCACTTT
TCTTGTACCAAGTTGGCAATTAAAAAAAACCATTGCTTTTCAAATTTTTT
GCACGAACCGGGCCCCTATCACGTCAAAAAAAAATCCTTTTTTTCCCCCC
CCCCTGAAATCCCCCTAAAATGAGTCCCAATTAAAAGGGCCCAAACCTGT
TTCCCGGGCCCCCTTGGGCCCCTGTCTTCCAAAACCTCTGAAGGTTACTT
TTTGCCCCAAAAAAAAAAAAATTCCCCCCCTGTTAAAAAAAAACCCCCCC
CGCCCCCCAAAATGAAAACCTGGCATTTTTTTTCTCAACCCCGGGTTTAA
CCCACCCCCCATTTTTTTTG
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