DY259772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_LACS1 (50S ribosomal protein L2 OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.807e-15 Identity = 51/145 (35.17%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIK 826 D++ ++G+ +PLA + +GT+IHNIE+ PG+GG+LVR+AGTS + L + + ++RL SG+ ++ C+ATIG V N H + K G W G K R + + G G G+ + GR P+ WG K Sbjct: 121 DVDIKVGNTLPLANIPVGTVIHNIELKPGKGGQLVRSAGTSAQLLGK-EGKYAIIRLTSGEVRMILVTCRATIGAVGNEQHELIKVGKAGRARWAG-KRPQSRGSVMNPNDHPHGGGEGKAPV----GR------PSPMSPWGKK 253
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_DINSH (50S ribosomal protein L2 OS=Dinoroseobacter shibae (strain DFL 12) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.807e-15 Identity = 61/167 (36.53%), Postives = 89/167 (53.29%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFG--PKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLRS 835 P++ V DK++ DI G+ MP + M IGTI+HNIE+ PG+GG++ RAAGT + + + +RL SG+ +L +C AT+G VSNP++ +NL K G N G P NP + G G+ + G GR + P GKP T G + R+ Sbjct: 107 PQRTAVGDKVVASQK-ADIKP--GNAMPFSGMPIGTIVHNIELKPGKGGQIARAAGTYAQFVGR-DGGYAQIRLSSGELRLVRQECMATVGAVSNPDNSNQNLGKAGRNRHKGIRPSVRGVVMNP-----VDHPHGGGEGRTSG--GRHPVTPWGKP--TKGARTRN 260
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_STRU0 (50S ribosomal protein L2 OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.946e-15 Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 404 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFG 679 +IG+ +PLA + +GT+IHNIE+ PG+GG+LVRAAG S + L + + L+RL SG+ ++ C+ATIG+V N N+ K G N W G Sbjct: 125 KIGNALPLANIPVGTVIHNIEMKPGKGGELVRAAGASAQVLGQ-EGKYVLVRLQSGEVRMILGTCRATIGSVGNEQQSLVNIGKAGRNRWKG 215 HSP 2 Score: 20.7866 bits (42), Expect = 1.946e-15 Identity = 7/12 (58.33%), Postives = 8/12 (66.67%), Query Frame = 1 Query: 721 NHPQGEGEGTKP 756 +HP G GEG P Sbjct: 229 DHPHGGGEGKAP 240
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BARQU (50S ribosomal protein L2 OS=Bartonella quintana GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.359e-15 Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPK 685 P++ V D I+ A +++ + G+ MPL M +GTIIHN+E+ PG+GG++ R+AGT + L +LRL SG+++L C AT+G VSNP+H N K G + W G + Sbjct: 107 PQRLDVGDSII---AGSNVDVKPGNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGTYAQ-LVGRGQGMVILRLNSGEQRLVSGSCFATVGAVSNPDHANINDGKAGRSRWRGKR 217
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BACV8 (50S ribosomal protein L2 OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.359e-15 Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 404 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFG 679 +IG+ +PL + +GT+IHNIE+ PGQG LVR+AG + L +C+++LPSG+ + + C+ATIG+V N +HG ++ K G W G Sbjct: 125 EIGNALPLENIPVGTVIHNIELRPGQGAALVRSAGNFAQ-LTSREGKYCVIKLPSGEVRQILSACKATIGSVGNSDHGLESSGKAGRTRWMG 215
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_AGRT5 (50S ribosomal protein L2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.359e-15 Identity = 60/167 (35.93%), Postives = 89/167 (53.29%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFG--PKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLRS 835 P++ DK++ VD+ G+ MPL + +G+IIHN+E+ PG+GG++ R+AGT + L + +LRL SG+++L C A+IG VSN +HG N K G + W G P NP + G G+ + G GR + P GKP T G + RS Sbjct: 107 PQRLAAGDKVIASDKAVDVKP--GNTMPLQYIPVGSIIHNVEMKPGKGGQIARSAGTYVQ-LVGRDAGMAILRLNSGEQRLVHGSCLASIGAVSNSDHGNINDGKAGRSRWRGKRPHVRGVVMNP-----VDHPHGGGEGRTSG--GRHPVTPWGKP--TKGKRTRS 261
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RK2_CHLAT (50S ribosomal protein L2, chloroplastic OS=Chlorokybus atmophyticus GN=rpl2 PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 2.359e-15 Identity = 59/149 (39.60%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 380 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFG--PKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWG 820 +A D Q+G+ +PL+ + +GT IHNIEV+PGQGGKLVRAAG L S+ +RLPSG+ +L +C ATIG V N + + K G W G PK NP G G G+ I GR KP+ WG Sbjct: 117 IAGPDAPLQLGNALPLSKIPLGTGIHNIEVSPGQGGKLVRAAG-GVAQLVAKEGSYVTVRLPSGEVRLVLKECSATIGQVGNVDASNVTIGKAGRKRWLGQRPKVRGVVMNPVDH---PHGGGEGRAPI----GR------SKPVTPWG 251
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_ENTFA (50S ribosomal protein L2 OS=Enterococcus faecalis GN=rplB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.528e-15 Identity = 40/101 (39.60%), Postives = 67/101 (66.34%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPW 673 MR ++ + + ++G+ +PL + +GT+IHNIE+ PG+GG+L+R+AGTS + L + + L+RL SG+ ++ C+ATIG+V N H N+ K G + W Sbjct: 114 MRLVSGPEADIKVGNALPLENIPVGTVIHNIEMKPGKGGQLIRSAGTSAQVLGK-EGKYVLIRLNSGEVRMILATCRATIGSVGNEQHELINIGKAGRSRW 213 HSP 2 Score: 20.7866 bits (42), Expect = 2.528e-15 Identity = 7/12 (58.33%), Postives = 8/12 (66.67%), Query Frame = 1 Query: 721 NHPQGEGEGTKP 756 +HP G GEG P Sbjct: 229 DHPHGGGEGKTP 240
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BACCR (50S ribosomal protein L2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.082e-15 Identity = 55/154 (35.71%), Postives = 85/154 (55.19%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLR 832 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTS + L + + L+RL SG+ +L + C+A+IG V N H + K G + W G K R + + G G G++ I + P GKP T G K R Sbjct: 114 MEVMSGPEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRASIGQVGNEQHELIKIGKAGRSRWLG-KRPTVRGSVMNPVDHPHGGGEGRSPIGRKSPMS---PWGKP--TLGFKTR 260
BLAST of DY259772 vs. ExPASy Swiss-Prot
Match: RL2_BACCQ (50S ribosomal protein L2 OS=Bacillus cereus (strain Q1) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.082e-15 Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSTKNLKEPTSSFCLLRLPSGKEKLNDTKCQATIGTVSNPNHGAKNLKKGGPNPWFGPKTVDKRNNPKSS*TILRGKGRGQNQIRGYTGRGFI*P*GKPLQTWGIKLR 832 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTS + L + + L+RL SG+ +L + C+A +G V N +H + K G + W G K R + + G G G++ I + P GKP T G K R Sbjct: 114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRAAVGQVGNESHELIKIGKAGRSRWLG-KRPTVRGSVMNPVDHPHGGGEGRSPIGRKSPMS---PWGKP--TLGFKTR 260 The following BLAST results are available for this feature:
BLAST of DY259772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259772 ID=DY259772; Name=DY259772; organism=Citrus clementina; type=EST; length=1125bpback to top |