DY259786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S_ASHGO (AP-3 complex subunit sigma OS=Ashbya gossypii GN=APS3 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.712e-27 Identity = 59/156 (37.82%), Postives = 103/156 (66.03%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSN--FVEADSIFGPGT-------RLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCS 548 MI +V++ N + +PRL K+Y + KQ+ L+ V+ ++ R ++ + + S+ G+ +++YK++ATLYF F+ D E+ELA+LDLIQ FVE LD+CF V ELD+++N+ L ++L+EII GG V+ET+ ++++ V+E+++ S Sbjct: 1 MIHAVLIFNKKCQPRLVKYYTPVDLPKQKLLLEQVYELISQRNSSIQSSFLITPPSLLSSGSETINEDIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVEALDRCFAEVNELDLIFNWQTLESVLEEIIQGGMVIETNVKKIVETVDELNRTS 156
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S3_MOUSE (AP-1 complex subunit sigma-3 OS=Mus musculus GN=Ap1s3 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.410e-25 Identity = 55/154 (35.71%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPSLSLYL 569 MI +++ + QGK RL K+Y P ++++++ R + + R S+F++ + +LVYK +A+LYF ++ +NEL L+++ +VE LDK F NVCELDI++N+ K + ILDE I GG++ ETS +KA+E+ ++ Y+ Sbjct: 1 MIHFILLFSRQGKLRLQKWYTTLPDKERKKITRDIIQTVLSRGHRTSSFIDWKEL-----KLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKTAVKAIEDSDMLQETMEEYM 149
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S3_HUMAN (AP-1 complex subunit sigma-3 OS=Homo sapiens GN=AP1S3 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.283e-24 Identity = 55/142 (38.73%), Postives = 91/142 (64.08%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEE 533 MI +++ + QGK RL K+Y P ++++++ R + ++ R S+FV+ + +LVYK +A+LYF ++ +NEL L+++ +VE LDK F NVCELDI++N+ K + ILDE I GG++ ETS +KA+E+ Sbjct: 1 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKEL-----KLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAIED 137
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S_ASPFU (AP-2 complex subunit sigma OS=Aspergillus fumigatus GN=aps2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.201e-22 Identity = 59/146 (40.41%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNV-SNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISK 542 ++ ++V N QGK RLAK+Y E++ +L V ++ R SNFVE F T++VY+ +A L+F D+++NELA L+ I FVE LD+ F NVCELD+V+N+ K++ ILDE+ G++ ETS V+ +E + K Sbjct: 2 VLSFILVQNRQGKTRLAKWYAPYSDEEKVKLKGEVHRLVAPRDQKYQSNFVE----FKRSTKIVYRRYAGLFFCVCVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDK 143
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S1_SCHPO (AP-1 complex subunit sigma-1 OS=Schizosaccharomyces pombe GN=SPAP27G11.06c PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.201e-22 Identity = 51/139 (36.69%), Postives = 92/139 (66.19%), Query Frame = 3 Query: 111 IKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAV 527 IK ++++ QGK RLAK+++ ++++ ++IR V ++ R + NFVE G ++VY+ +A+L+FV + +NEL +L++I FVE LDK F NVCELD+++N+ K + +++E++ G++ E+S V+ AV Sbjct: 3 IKFFLLVSRQGKVRLAKWFNTLSIKERAKIIRDVSSLVITRKPKMCNFVEYK-----GEKIVYRRYASLFFVCGIEQDDNELIILEVIHKFVECLDKYFGNVCELDLIFNFEKAYYVMEELLLAGELQESSKTNVLSAV 136
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S_EMENI (AP-2 complex subunit sigma OS=Emericella nidulans GN=aps2 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.568e-22 Identity = 59/146 (40.41%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNV-SNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISK 542 ++ ++V N QGK RLAK+Y E++ +L V ++ R SNFVE F T++VY+ +A L+F D+++NELA L+ I FVE LD+ F NVCELD+V+N+ K++ ILDE+ G++ ETS V+ +E + K Sbjct: 2 VLSFILVQNRQGKTRLAKWYAPYSDEEKVKLKGEVHRLVAPRDQKYQSNFVE----FKRSTKIVYRRYAGLFFCACVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDK 143
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S_SCHPO (AP-2 complex subunit sigma OS=Schizosaccharomyces pombe GN=aps2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.048e-22 Identity = 55/146 (37.67%), Postives = 94/146 (64.38%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNV-SNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISK 542 MI+ +++ N GK RL+K+Y +++ L + ++ R +NF+E ++ ++LVY+ +A LYF F DS++N+LA+L++I FVE LD F NVCELD+++N+ K+ ILDEII GG++ E++ V++ +E + K Sbjct: 1 MIQFILIQNRHGKNRLSKYYVPFDDDEKVRLKARIHQLISQRNQKFQANFLEWEN-----SKLVYRRYAGLYFCFCVDSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEIILGGEIGESNKKSVLERIEALEK 141
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S1_RAT (AP-2 complex subunit sigma OS=Rattus norvegicus GN=Ap2s1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.048e-22 Identity = 54/138 (39.13%), Postives = 88/138 (63.77%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIK 521 MI+ +++ N GK RLAK+Y +++Q+LI V V+ R +NFVE + +++Y+ +A LYF D ++N LA L+ I FVE L++ F NVCELD+V+N+ K++T++DE+ G++ ETS +V+K Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF-----KIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLK 133
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S1_PONAB (AP-2 complex subunit sigma OS=Pongo abelii GN=AP2S1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.048e-22 Identity = 54/138 (39.13%), Postives = 88/138 (63.77%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIK 521 MI+ +++ N GK RLAK+Y +++Q+LI V V+ R +NFVE + +++Y+ +A LYF D ++N LA L+ I FVE L++ F NVCELD+V+N+ K++T++DE+ G++ ETS +V+K Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF-----KIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLK 133
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S1_MOUSE (AP-2 complex subunit sigma OS=Mus musculus GN=Ap2s1 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.048e-22 Identity = 54/138 (39.13%), Postives = 88/138 (63.77%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIK 521 MI+ +++ N GK RLAK+Y +++Q+LI V V+ R +NFVE + +++Y+ +A LYF D ++N LA L+ I FVE L++ F NVCELD+V+N+ K++T++DE+ G++ ETS +V+K Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF-----KIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLK 133 The following BLAST results are available for this feature:
BLAST of DY259786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259786 ID=DY259786; Name=DY259786; organism=Citrus clementina; type=EST; length=950bpback to top |