DY259786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S1_HUMAN (AP-2 complex subunit sigma OS=Homo sapiens GN=AP2S1 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 2.048e-22 Identity = 54/138 (39.13%), Postives = 88/138 (63.77%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIK 521 MI+ +++ N GK RLAK+Y +++Q+LI V V+ R +NFVE + +++Y+ +A LYF D ++N LA L+ I FVE L++ F NVCELD+V+N+ K++T++DE+ G++ ETS +V+K Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF-----KIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLK 133
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S1_BOVIN (AP-2 complex subunit sigma OS=Bos taurus GN=AP2S1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.048e-22 Identity = 54/138 (39.13%), Postives = 88/138 (63.77%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIK 521 MI+ +++ N GK RLAK+Y +++Q+LI V V+ R +NFVE + +++Y+ +A LYF D ++N LA L+ I FVE L++ F NVCELD+V+N+ K++T++DE+ G++ ETS +V+K Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF-----KIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLK 133
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S1_MOUSE (AP-1 complex subunit sigma-1A OS=Mus musculus GN=Ap1s1 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.048e-22 Identity = 53/142 (37.32%), Postives = 91/142 (64.08%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEE 533 M++ +++ + QGK RL K+Y +++++++R + V+ R + +F+E + ++VYK +A+LYF + +NEL L+LI +VE LDK F +VCELDI++N+ K + ILDE + GG V +TS V+KA+E+ Sbjct: 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDL-----KVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQ 137
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S1_HUMAN (AP-1 complex subunit sigma-1A OS=Homo sapiens GN=AP1S1 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.048e-22 Identity = 53/142 (37.32%), Postives = 91/142 (64.08%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEE 533 M++ +++ + QGK RL K+Y +++++++R + V+ R + +F+E + ++VYK +A+LYF + +NEL L+LI +VE LDK F +VCELDI++N+ K + ILDE + GG V +TS V+KA+E+ Sbjct: 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDL-----KVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQ 137
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S1_BOVIN (AP-1 complex subunit sigma-1A OS=Bos taurus GN=AP1S1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.784e-22 Identity = 52/141 (36.88%), Postives = 90/141 (63.83%), Query Frame = 3 Query: 111 IKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEE 533 ++ +++ + QGK RL K+Y +++++++R + V+ R + +F+E + ++VYK +A+LYF + +NEL L+LI +VE LDK F +VCELDI++N+ K + ILDE + GG V +TS V+KA+E+ Sbjct: 1 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDL-----KVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQ 136
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S1_DICDI (AP-1 complex subunit sigma-1 OS=Dictyostelium discoideum GN=ap1s1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21 Identity = 57/151 (37.75%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYD-FQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPSL 557 MI ++ N Q K RL+KFY + P EK + R V + R+ NFV+ +VY+ FA+L+FV V DS++NEL L+ IQ FV LD F N+CELD++Y + + + +LDE + G + E+SS E+++A+ + SL Sbjct: 1 MIHFLLCFNRQSKVRLSKFYSTYTPTEKNRAT-REVMNQVLSRSPKFCNFVQWREF-----TIVYQRFASLFFVMVTDSTDNELVTLESIQRFVVVLDIVFGNICELDLIYEFQRAYQVLDEFLLTGHLQESSSKEILRAINDAEGMEKSL 145
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S_GIBZE (AP-2 complex subunit sigma OS=Gibberella zeae GN=APS2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.863e-21 Identity = 57/146 (39.04%), Postives = 88/146 (60.27%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNV-SNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISK 542 M+ +++ N QGK RLAK+Y E++ +L V ++ R SNFVE + ++VY+ +A L+F D+++NELA L+ I FVE LD F NVCELD+V+N+ K++ ILDE+ G++ ETS V+ +E + K Sbjct: 1 MLSFILIQNRQGKTRLAKWYAPFSDEQKIKLKGEVHRLVAPRDQKYQSNFVEFRN-----NKIVYRRYAGLFFCACVDTNDNELAFLEAIHFFVEVLDAFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDK 141
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S2_MOUSE (AP-1 complex subunit sigma-2 OS=Mus musculus GN=Ap1s2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.590e-21 Identity = 51/138 (36.96%), Postives = 87/138 (63.04%), Query Frame = 3 Query: 120 VMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEE 533 +++ + QGK RL K+Y ++++++ R + + R + +F+E + ++VYK +A+LYF + +NEL L++I +VE LDK F +VCELDI++N+ K + ILDE + GG+V ETS V+KA+E+ Sbjct: 4 MLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDL-----KIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQ 136
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S2_HUMAN (AP-1 complex subunit sigma-2 OS=Homo sapiens GN=AP1S2 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.590e-21 Identity = 51/138 (36.96%), Postives = 87/138 (63.04%), Query Frame = 3 Query: 120 VMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEE 533 +++ + QGK RL K+Y ++++++ R + + R + +F+E + ++VYK +A+LYF + +NEL L++I +VE LDK F +VCELDI++N+ K + ILDE + GG+V ETS V+KA+E+ Sbjct: 4 MLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDL-----KIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQ 136
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S2_BOVIN (AP-1 complex subunit sigma-2 OS=Bos taurus GN=AP1S2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.590e-21 Identity = 51/138 (36.96%), Postives = 87/138 (63.04%), Query Frame = 3 Query: 120 VMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEE 533 +++ + QGK RL K+Y ++++++ R + + R + +F+E + ++VYK +A+LYF + +NEL L++I +VE LDK F +VCELDI++N+ K + ILDE + GG+V ETS V+KA+E+ Sbjct: 4 MLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDL-----KIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQ 136 The following BLAST results are available for this feature:
BLAST of DY259786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259786 ID=DY259786; Name=DY259786; organism=Citrus clementina; type=EST; length=950bpback to top |