DY259786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S_NEUCR (AP-2 complex subunit sigma OS=Neurospora crassa GN=aps-2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.607e-21 Identity = 56/146 (38.36%), Postives = 88/146 (60.27%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNV-SNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISK 542 M+ +++ N QGK RLAK+Y E++ +L + ++ R SNFVE + ++VY+ +A L+F D+++NELA L+ I FVE LD F NVCELD+V+N+ K++ ILDE+ G++ ETS V+ +E + K Sbjct: 1 MLSFILIQNRQGKTRLAKWYVPYSDEEKIKLKGEIHRLVAPRDQKYQSNFVEFRN-----HKVVYRRYAGLFFCACVDTNDNELAYLEAIHFFVEVLDSFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDK 141
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S_DICDI (AP-2 complex subunit sigma OS=Dictyostelium discoideum GN=ap2s1 PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 1.124e-20 Identity = 53/142 (37.32%), Postives = 89/142 (62.68%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYD-FQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVE 530 MI +++ N QGK RL+K+Y ++ VEK++ L + ++ R +NFVE + R+VY+ +A L+F D ++NEL L+ I +FVE LD F NVCELD+V+N+ K++ I+DE+ G+++E S +++ +E Sbjct: 1 MIHFILIQNRQGKTRLSKWYTPYEDVEKRK-LSHEIHKIVNSRETKFTNFVEFRT-----HRIVYRRYAGLFFSVCVDPTDNELFCLEAIHLFVEVLDAYFGNVCELDLVFNFYKVYAIIDEVFLAGELMEPSKHVILQRME 136
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S2_DICDI (AP-1 complex subunit sigma-2 OS=Dictyostelium discoideum GN=ap1s2 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.504e-20 Identity = 48/138 (34.78%), Postives = 85/138 (61.59%), Query Frame = 3 Query: 120 VMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEE 533 +++++ QGK RL K+Y +++ R + ++ R + NF+E ++++K +A+LYFV D +NEL +L++I FVE LD+ F NVCELD+++N+ K + ILDE+I G++ ETS V++ + + Sbjct: 6 LLLLSRQGKTRLTKWYSPFTNKEKSRFTREIGNMVLNRPPKLCNFLEWKEY-----KIIFKRYASLYFVVCCDREDNELIVLEIIHHFVEILDRYFGNVCELDLIFNFHKAYYILDELIMAGELQETSKKTVLRLISQ 138
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP4S1_HUMAN (AP-4 complex subunit sigma-1 OS=Homo sapiens GN=AP4S1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.120e-19 Identity = 50/149 (33.56%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MIK +++N QG+ RL+K+Y+ + K+ L V R++ +F+E +L+Y+ +A L+ V + +ENE+A+ + I FVE LD+ F V ELDI++N K+H ILDE++ G ++ET+ ++ + + K S S Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDF-----KLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARILAPLLILDKMSES 144
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP4S1_BOVIN (AP-4 complex subunit sigma-1 OS=Bos taurus GN=AP4S1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.616e-19 Identity = 50/149 (33.56%), Postives = 85/149 (57.05%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MIK +++N QG+ RL+K+Y+ + K+ L V R++ +F+E +L+Y+ +A L+ V + +ENE+A+ + I FVE LD F V ELDI++N K+H ILDE++ G ++ET+ ++ + + K S S Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVEINKRTLLETEVIKSCLSRSNEQCSFIEYKDF-----KLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDDYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARILAPLLILDKMSDS 144
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S1_MAIZE (AP-2 complex subunit sigma-1 OS=Zea mays GN=AP-17 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.052e-18 Identity = 52/134 (38.81%), Postives = 82/134 (61.19%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKL--HTILDEIIFGGQVLETS 503 MI+ +++ N QGK RLAK+Y ++ ++ V ++ R +NFVE + +++Y+ +A L+F D ++NELA L+ I +FVE LD F NVCELD+V+N+ K+ + ILDE I G++ ETS Sbjct: 1 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRT-----HKVIYRRYAGLFFSICVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYRYLILDEFILAGELQETS 129
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP4S1_MOUSE (AP-4 complex subunit sigma-1 OS=Mus musculus GN=Ap4s1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.374e-18 Identity = 50/149 (33.56%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MIK +++N QG+ RL+K+Y+ + K+ L V R+ +F+E +L+Y+ +A L+ V + +ENE+A+ + I FVE LD F V ELDI++N K+H ILDE++ G ++ET+ ++ + + K S S Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRALLETEVSKSCLSRSSEQCSFIEYKDF-----KLIYRQYAALFVVVGVNDTENEMAIYEFIHNFVEVLDGYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARILAPLLILDKLSES 144
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP4S_DICDI (AP-4 complex subunit sigma OS=Dictyostelium discoideum GN=ap4s1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.221e-18 Identity = 49/144 (34.03%), Postives = 85/144 (59.03%), Query Frame = 3 Query: 111 IKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISK 542 IK +++N +GK RL+++Y+ P E++ + + R + +FVE +++Y+ +ATL+F+ D++ENELA+L+LI +VE LD CF NV I++N K H ILDE++ G ++E S +++ V + K Sbjct: 3 IKYFLLVNIRGKTRLSQYYESIPFEERPAMESEIIRKCLSRTEIQCSFVEYKDY-----KVIYRKYATLFFIVGVDTTENELAILELIHNYVEILDSCFDNV----IMFNLDKAHFILDEMVSNGDIVEISKQHILEFVNLLYK 137
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP2S_YEAST (AP-2 complex subunit sigma OS=Saccharomyces cerevisiae GN=APS2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.819e-18 Identity = 51/134 (38.06%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 111 IKSVMVMNTQGKPRLAKFYDFQPVEKQ--QELIRSVFGVLCGRAD-NVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETS 503 ++ ++ N QG RL +++D + Q Q+ I ++ ++ R + SNFVE F T+L+Y+ +A LYFV D ++E L I +FVE LD F NVCELDIV+N+ K++ I+DE+ GG++ E S Sbjct: 3 VQFILCFNKQGVVRLVRWFDVHSSDPQRSQDAIAQIYRLISSRDHKHQSNFVE----FSDSTKLIYRRYAGLYFVMGVDLLDDEPIYLCHIHLFVEVLDAFFGNVCELDIVFNFYKVYMIMDEMFIGGEIQEIS 132
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP1S1_YEAST (AP-1 complex subunit sigma-1 OS=Saccharomyces cerevisiae GN=APS1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.984e-17 Identity = 49/141 (34.75%), Postives = 87/141 (61.70%), Query Frame = 3 Query: 111 IKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVF-VFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIF-GGQVLETSSIEVIKAV 527 +K +++++ QGK RL K+Y ++ ++++ + + R + N +E + ++VYK +A+LYF+ + +NEL L++I FVET+D F NVCELDI++N+SK++ IL+E+I G + E+S EV+ V Sbjct: 4 LKYLLLVSRQGKIRLKKWYTAMSAGEKAKIVKDLTPTILARKPKMCNIIEYND-----HKVVYKRYASLYFIVGMTPDVDNELLTLEIIHRFVETMDTYFGNVCELDIIFNFSKVYDILNEMIMCDGSIAESSRKEVLHHV 139 The following BLAST results are available for this feature:
BLAST of DY259786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259786 ID=DY259786; Name=DY259786; organism=Citrus clementina; type=EST; length=950bpback to top |