DY259789

Overview
NameDY259789
Unique NameDY259789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14344 contig Ccv1_Contig14344:103..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.438e-25
Identity = 74/239 (30.96%), Postives = 112/239 (46.86%), Query Frame = 3
Query:   33 EIPVIDLST-------DPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEY-PLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++PV+D+           ++   +V  AC   GFFQV  HG  + L       A +FF  P+ EK++ +R      GY      +  +   WKE   F   D    P   +     L       P++ P+G   + + Y  E+++                    + +F + ++ +R NYYPPCP PE  LG GPH D  ALT+L QDDVGGL++    +GEW PV P+P A +I+IG+
Sbjct:   62 DMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLG------PDFAPMG--RVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEV--LVDGEWRPVSPVPGAMVINIGD 290          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.453e-25
Identity = 81/241 (33.61%), Postives = 114/241 (47.30%), Query Frame = 3
Query:   33 EIPVIDLSTDPKQ--LVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRD----EVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTT------FLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            EIP IDL  DP Q  LV  +  A ++WG FQV NHG PS+L  +++   KEFF+ P EEK+   R     +V   G   Q+  +  + W +     +  P+ +                 WP+ P  +R + E+YA+ + +                     G  KE          L+ NYYPPCP P+LALGV  H D  ALTVL  ++V GLQ+ K  +  WI    IP+A +I IG+
Sbjct:   42 EIPTIDLD-DPVQDRLVRSIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINY-------------RFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEG----GVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFK--DDRWIDAKYIPNALVIHIGD 262          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.204e-25
Identity = 71/232 (30.60%), Postives = 105/232 (45.26%), Query Frame = 3
Query:   36 IPVIDLSTDPKQLVLE--VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQ--EHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +P IDLS+    L     +  AC K GFF V+NHG    L A   +  + FFD P+  KQK +R      GY             WKE   F   +      S    D     L  ++ +    F ++ +DY   +                   D  +G+F+E  + +R N+YPPC  P+L LG GPH D  +LT+L QD V GLQ+    + +W  + P P A++++IG+
Sbjct:   63 VPFIDLSSQDSTLEAPRVIAEACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDN--SGSRTVQDYFSDTLGQEFEQ----FGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQV--FVDNQWQSIRPNPKAFVVNIGD 286          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.137e-25
Identity = 78/236 (33.05%), Postives = 117/236 (49.58%), Query Frame = 3
Query:   39 PVIDLS---TDP---KQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIE-EKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDF--WLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            PVIDL     DP   K++V +V  A +KWGFFQV+NHG P+ +  R  +  ++FF+Q  E +KQ   RD    + Y     T N+  +K       W +D  F   +P P   +         E+P    E   D++++V+K                   L+ Y      F   NYYPPCP PEL +G   H D G +T+L QDD+GGLQ+  +++  W+ V P P + +++IG+
Sbjct:   59 PVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVY-----TSNLDLYKSSVPAASW-RDTIFCYMAPNPPSLQ---------EFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNH--WVDVPPTPGSLVVNIGD 277          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.217e-24
Identity = 72/234 (30.77%), Postives = 113/234 (48.29%), Query Frame = 3
Query:   33 EIPVIDLST-DPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKR--DEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTT--FLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            E+P+ID S  D ++L++++  A   WG +Q++NH  PSE+ ++++   KEFF+ P EEK+   +  D     GY  +   K + +       W+ +       P   + +       WP+ P  +RE  E+YA+ +                     L+           L+ NYYPPCP P+LALGV  H D   +T+L  +DV GLQ  K  +G W  V  IP+A +I IG+
Sbjct:   40 EVPIIDFSDPDEEKLIVQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLF-KEISEGDTTKKGWVDNLFNKIWPPSVVNYQF------WPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVPNDVQGLQACK--DGRWYDVKYIPNALVIHIGD 264          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.217e-24
Identity = 75/235 (31.91%), Postives = 115/235 (48.94%), Query Frame = 3
Query:   36 IPVIDLSTDPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDE----VHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRL-QGYFKEQTTFL-RFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            IPV+DLS   ++ V   V  A ++WG FQV+NHG P+EL  R++   ++FF+ P  EK+ V + E    +   G   Q+  +  + W +     +  P+ +                 WP+ P  +RE+ E+YA  V+K                 D L +G   E   ++ + NYYPPCP P+LALGV  H D   +T+L  ++V GLQ+ K  +  W     IP A I+ IG+
Sbjct:   43 IPVVDLSDPDEESVRRAVVKASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNY-------------RFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNEVPGLQVFK--DDHWFDAEYIPSAVIVHIGD 262          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.712e-24
Identity = 65/241 (26.97%), Postives = 114/241 (47.30%), Query Frame = 3
Query:   21 EIDDEIPVIDLSTDPK------QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  +EIP+I L+   +      ++  ++  AC+ WG FQ+++HG  +EL + +   A+EFF  P EEK +         G+    H +   V+DW+E+  ++                   R  ++WP+ P  +RE+ + Y+ E+                   + L     +    +  N+YP CP P+L LG+  H D G +T+L QD VGGLQ  +     WI V P+  A+++++G+
Sbjct:   34 DFSNEIPIISLAGIDEVEGRRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIR-------------HRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGD 261          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.542e-24
Identity = 72/237 (30.38%), Postives = 114/237 (48.10%), Query Frame = 3
Query:   33 EIPVIDL-STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQ-PIEEKQKVKR----DEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRL--QGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++PVIDL   D  ++V  +  A ++WG FQ+INHG P E  A ++K  KEFF+  P EEK+ + +    +++   G   Q+  +  + W +     +  P+ +                 WP+ P  +RE  E+Y + + +                   +       E    L+ NYYPPCP P+LALGV  H D   +T+L  ++V GLQ+ K  +G W  V  IP+A I+ IG+
Sbjct:   54 QVPVIDLRDPDENKMVKLIADASKEWGIFQLINHGIPDEAIADLQKVGKEFFEHVPQEEKELIAKTPGSNDIEGYGTSLQKEVEGKKGWVDHLFHKIWPPSAVNY-------------RYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVPNEVQGLQVFK--DGHWYDVKYIPNALIVHIGD 275          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.626e-24
Identity = 79/242 (32.64%), Postives = 113/242 (46.69%), Query Frame = 3
Query:   36 IPVID----LSTDPK---QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLG--FRELCEDYAR---EVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +P+ID    LS DP+   ++   VG AC++ GFFQV+NHG  +EL A   +    FF  P+ EKQ+  R      GY      +  +   WKE   F        P+ P         L   +    LG   R L E YAR   E+ +                    + +F+   + +R NYYPPC  P   LG GPH D  +LT+L QD+VGGLQ+   + G W  + P  DA++++IG+
Sbjct:   39 VPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSF-----RSCPSDPA--------LVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQV--HTEGRWRSIRPRADAFVVNIGD 265          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.042e-24
Identity = 67/241 (27.80%), Postives = 117/241 (48.55%), Query Frame = 3
Query:   21 EIDDEIPVIDL------STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  +EIP+I L      +    ++  ++  AC+ WG FQV++HG  +E+ +++   AKEFF  P EEK +         G+    H +   V+DW+E+  ++   PT              R  ++WP+ P G+  + + Y+ ++ +                 + L     +    +  N+YP CP P+L LG+  H D G +T+L QD VGGLQ  K +   WI V P+  A+++++G+
Sbjct:   36 QFSNEIPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSY-PT------------RARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGD 263          
The following BLAST results are available for this feature:
BLAST of DY259789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
GAOX2_ORYSI1.438e-2530.96Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
FLS_CITUN2.453e-2533.61Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
GAOX2_ARATH3.204e-2530.60Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
ACCH3_SOLLC7.137e-2533.051-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_MALDO1.217e-2430.77Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FLS1_ARATH1.217e-2431.91Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FL3H_MALDO2.712e-2426.97Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FLS_PETHY3.542e-2430.38Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
GAO1B_WHEAT4.626e-2432.64Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
FL3H_PETHY6.042e-2427.80Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259789 ID=DY259789; Name=DY259789; organism=Citrus clementina; type=EST; length=915bp
CAAAGGTTCAAAACATTATGGAAATAGATGATGAAATCCCAGTTATTGAT
CTCTCTACCGACCCCAAACAACTTGTCTTGGAAGTTGGCCATGCATGTCA
AAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGCCATCAGAATTAA
AGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGATCAACCAATAGAG
GAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCATGA
CCAGGAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTTTT
GGTTGCAAGATCCAACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATAAG
GAGCTGAGGAGGCTCACTAACCAATGGCCTGAGTACCCTCTTGGATTTAG
GGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGCTAGCTTACAAGT
TACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGATCGGTTGCAA
GGCTATTTTAAAGAACAAACAACCTTTCTGCGATTCAACTACTATCCTCC
TTGCCCTTATCCTGAGCTAGCTCTGGGCGTCGGTCCACACAAAGATGGAG
GTGCCTTAACGGTACTTGCTCAAGATGACGTTGGTGGACTTCAAATAAAG
AAGAAATCAAATGGAGAGTGGATTCCTGTTTAACCAATCCCAGATGCCTA
TATTATTAGCATTGGTGAAGCCCCCCCAGTTTGGAACCAATGATAATTAT
GAAAGTCCAAACCCCAAAGTGGTGGGTCAACCCTAAAAAAGGAAAGTTTT
TCGATTCCATTTCTTTCTTCTACCCGCCCAACAACTCATGATGTAAGCTT
TGTAATAAATTTGAAAAAAAGCCAACTCCCGCCAGGGAACGGCAATCTCG
GCGGGGCAAACTCCG
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