DY259789

Overview
NameDY259789
Unique NameDY259789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14344 contig Ccv1_Contig14344:103..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.643e-19
Identity = 66/242 (27.27%), Postives = 113/242 (46.69%), Query Frame = 3
Query:   18 MEIDDEIPVIDLST----DPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ME + + PV+DLS     +  Q +  +  AC+ WGFF+++NHG P +L    EK  KE +   +E+K     D +   G  + E      DW+  F        +L   P+ +  ++  ++++       +R   +D+ + +E                    L+  F   K  T   + + YP CP PE+  G+  H D G + +L QDD V GLQ+ K  +G+WI V P+  + +I++G+
Sbjct:    1 MEKNIKFPVVDLSKLIGEERDQTMALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQK---FNDMLKSKGLENLEREVEDVDWESTF--------YLRHLPQSNLYDIPDMSDE-------YRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLK--DGDWIDVPPLNHSIVINLGD 222          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.982e-19
Identity = 70/239 (29.29%), Postives = 102/239 (42.68%), Query Frame = 3
Query:   30 DEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELC---EDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQ------TTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            D +PV+D+  DP      V  A Q WG F +  HG P EL AR+E A    F  P  EK +  R      GY     +            W +  TF PA+   D   LR+L   WP+    +R  C   E++ RE+                   +++     EQ      T  +  N+YP CP P+ ALG+  H D G  T + Q  V GLQ+ +     W+ V  +P A ++++G+
Sbjct:   47 DAVPVVDMR-DPCAAEA-VALAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKC-----MWSEGYTFSPANLRSD---LRKL---WPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGD 272          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.982e-19
Identity = 69/240 (28.75%), Postives = 112/240 (46.67%), Query Frame = 3
Query:   30 DEIPVIDLSTDPKQ----LVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFL-----RFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            D  PVI++     Q     +  +  AC+ WGFF+++NH  P EL   +E+  KE + + +E++ K    E+            N  DW+  F        F+   P  +  E+  LT++        R++ +++A ++EK                   L+  F   TT L     + + YPPCP PEL  G+  H D G L +L QDD V GLQ+ K  +GEW+ V P+  + +I++G+
Sbjct:    2 DSFPVINMEKLEGQERAATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFK----ELMASKVEGAVVDANDMDWESTF--------FIRHLPVSNLSEIPDLTDE-------HRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLK--DGEWVDVPPMNHSIVINLGD 220          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.304e-18
Identity = 66/235 (28.09%), Postives = 112/235 (47.66%), Query Frame = 3
Query:   39 PVIDLST---DPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            PV+D+     + +   LE +  AC+ WGFF+++NHG  +EL   +EK  K+ + + +E++ K   + V   G    +   +  DW+  F        FL   P  +  E+       P+    +R+  +++A E+EK                   L+  F   K      + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  +GEW+ V P+  + +I++G+
Sbjct:    5 PVVDMDLINGEERAATLEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFK---EMVAAKGLEAVQSEIHYLDWESTF--------FLRHLPSSNISEI-------PDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DGEWMDVPPVHHSIVINLGD 219          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18
Identity = 65/241 (26.97%), Postives = 112/241 (46.47%), Query Frame = 3
Query:   27 DDEIPVIDL------STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIE-EKQKVKRDEVHPMGYHDQEHTKN---VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            D +IPVI+L      S   +++V ++G A +K+GFFQ++NHG P ++  ++    ++F +Q  + ++Q   RD  +    +   +        +W++  +  +        S +PD +E          +P   R++   Y+  V                   + L+     +   L  +YYP CP PEL  G   H D G LT+L QD +GGLQI  ++  +WI V  IP A +I+I +
Sbjct:   88 DIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTMECIMN-------SNQPDPQE----------FPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLEN--QWIDVPFIPGALVINIAD 309          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.470e-18
Identity = 69/243 (28.40%), Postives = 110/243 (45.27%), Query Frame = 3
Query:   33 EIPVIDL----STDP---KQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEV--HPMGYHDQ--EHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQ---GYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++P IDL    S D    K+   E+  A   WG   +INHG P EL  R++ A KEFF+ P+EEK+    D+   +  GY  +   +     +W++ F        F    PE      +   + WP  P  +     +YA+++                    RL+   G  ++    ++ N+YP CP PELALG   H D  ALT +  + V GLQ+  +   +W+    +P++ I+ IG+
Sbjct:   52 QLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYF--------FHCVYPEH-----KTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHNMVPGLQLFYED--KWVTAKCVPNSIIMHIGD 279          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.470e-18
Identity = 61/217 (28.11%), Postives = 100/217 (46.08%), Query Frame = 3
Query:   81 EVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++  AC+ WGFF+++NHG P E+   +EK  K  + + +E++ K   + V   G    E      DW+  F        FL   P  +        +Q P+    +RE+  D+ + +EK                   L+  F   K      + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  +G WI V P+  + ++++G+
Sbjct:   23 KINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFK---ELVAKKGLEGVEVEVTDMDWESTF--------FLRHLPSSN-------ISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DGRWIDVPPMRHSIVVNLGD 219          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.104e-17
Identity = 65/238 (27.31%), Postives = 111/238 (46.64%), Query Frame = 3
Query:   30 DEIPVIDLST---DPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  P+I+L       +   +E +  AC+ WGFF+++NHG P E+   +EK  K  + + +E++ K   + V   G    +      DW+  F        FL   P  +  E+  L ++       +RE+  D+A+ +EK                   L+  F   K      + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  +G+WI V P+  + ++++G+
Sbjct:    2 ENFPIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFK---ELVASKGLEAVQAEVTDLDWESTF--------FLRHLPVSNISEVPDLDDE-------YREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DGQWIDVPPMRHSIVVNLGD 219          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.441e-17
Identity = 65/238 (27.31%), Postives = 110/238 (46.22%), Query Frame = 3
Query:   30 DEIPVIDLST---DPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  P+I+L     D +   +E +  AC+ WGFF+++NHG P E+   +EK  K  + + +E++ K   + V   G    +      DW+  F        FL   P  +        +Q P+    +RE+  D+A+ +EK                   L+  F   K      + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  + +WI V P+  + ++++G+
Sbjct:    2 ENFPIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFK---ELVASKGLEAVQAEVTDLDWESTF--------FLRHLPTSN-------ISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DEQWIDVPPMRHSIVVNLGD 219          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.459e-17
Identity = 65/238 (27.31%), Postives = 110/238 (46.22%), Query Frame = 3
Query:   30 DEIPVIDLST---DPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  P+I+L     D +   +E +  AC+ WGFF+++NHG P E+   +EK  K  + + +E++ K   + V   G    +      DW+  F        FL   P  +        +Q P+    +RE+  D+A+ +EK                   L+  F   K      + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  + +WI V P+  + ++++G+
Sbjct:    2 ENFPIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFK---ELVASKGLEAVQAEVTDLDWESTF--------FLRHLPTSN-------ISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DEQWIDVPPMRHSIVVNLGD 219          
The following BLAST results are available for this feature:
BLAST of DY259789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ACCO1_BRAJU7.643e-1927.271-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
G3O22_WHEAT9.982e-1929.29Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
ACCO_PERAE9.982e-1928.751-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO2_MALDO1.304e-1828.091-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
DV4H_CATRO2.224e-1826.97Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
LDOX_PERFR6.470e-1828.40Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
ACCO2_SOLLC6.470e-1828.111-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO3_PETHY1.104e-1727.311-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO4_SOLLC1.441e-1727.311-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO1_SOLLC2.459e-1727.311-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259789 ID=DY259789; Name=DY259789; organism=Citrus clementina; type=EST; length=915bp
CAAAGGTTCAAAACATTATGGAAATAGATGATGAAATCCCAGTTATTGAT
CTCTCTACCGACCCCAAACAACTTGTCTTGGAAGTTGGCCATGCATGTCA
AAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGCCATCAGAATTAA
AGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGATCAACCAATAGAG
GAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCATGA
CCAGGAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTTTT
GGTTGCAAGATCCAACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATAAG
GAGCTGAGGAGGCTCACTAACCAATGGCCTGAGTACCCTCTTGGATTTAG
GGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGCTAGCTTACAAGT
TACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGATCGGTTGCAA
GGCTATTTTAAAGAACAAACAACCTTTCTGCGATTCAACTACTATCCTCC
TTGCCCTTATCCTGAGCTAGCTCTGGGCGTCGGTCCACACAAAGATGGAG
GTGCCTTAACGGTACTTGCTCAAGATGACGTTGGTGGACTTCAAATAAAG
AAGAAATCAAATGGAGAGTGGATTCCTGTTTAACCAATCCCAGATGCCTA
TATTATTAGCATTGGTGAAGCCCCCCCAGTTTGGAACCAATGATAATTAT
GAAAGTCCAAACCCCAAAGTGGTGGGTCAACCCTAAAAAAGGAAAGTTTT
TCGATTCCATTTCTTTCTTCTACCCGCCCAACAACTCATGATGTAAGCTT
TGTAATAAATTTGAAAAAAAGCCAACTCCCGCCAGGGAACGGCAATCTCG
GCGGGGCAAACTCCG
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