DY259789

Overview
NameDY259789
Unique NameDY259789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14344 contig Ccv1_Contig14344:103..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.301e-15
Identity = 62/240 (25.83%), Postives = 101/240 (42.08%), Query Frame = 3
Query:   36 IPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFD--FWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQT--------TFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIK--KKSNGEWIPV*PIPDAYIISIGE 719
            IPVI LS   +  +L    AC++WG F + +HG    L   ++   K  F  P+  K    R      GY        V      +D   W +  + + +S        R  T  WP+    F  + E+Y + ++                  + L     ++T        +FL+ N YP CP P LA+G+ PH D   LT+L Q ++ GL+I+  ++    WI V PI  + ++ +G+
Sbjct:   47 IPVISLSNPEEHGLLR--QACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGY-------GVVRISMFYDKLMWSEGFSVMGSSLR------RHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGD 271          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.005e-15
Identity = 63/235 (26.81%), Postives = 102/235 (43.40%), Query Frame = 3
Query:   36 IPVIDL------STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQ-PIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            IP IDL      +   + +V +V  A +K+GFFQ INHG P ++  ++    + F DQ P   K    RD+   + YH      N   ++     W    + + A   P  ++L  +            E+  +Y++EV K                 + L+     +  ++  + +PPCP P    G   H D   LT+L  D+ GGLQ+    +G WI V P P+A I ++G+
Sbjct:   55 IPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYH-----SNADLYESPAASWRDTLSCVMAPDVPKAQDLPEVCG----------EIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQV--LYDGYWIDVPPNPEALIFNVGD 272          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.126e-15
Identity = 69/238 (28.99%), Postives = 109/238 (45.80%), Query Frame = 3
Query:   36 IPVIDLS-TDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVR-DWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEK-XXXXXXXXXXXXXXXXADRLQGYFKEQ--TTFLRFNYYPPCPYPEL----ALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGEA 722
            IPV+DL+  D K L++   +AC+ +GFF+++NHG P EL A +E  A  FF +   EK +    +  P GY  +    N    W E          +L  +  PD    + L   + E P  FR + E+Y   V+                   + L    K++   +  R N+YPPCP  +      +G G H D   ++VL  +   GLQI   ++G W+ V P   ++ I++G+A
Sbjct:   27 IPVVDLTHPDAKNLIV---NACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDRAGPPD--PFGYGSKRIGPNGDVGWVE----------YLLLNTNPDVISPKSLC-IFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQI-CLTDGTWVSVPPDQTSFFINVGDA 247          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.126e-15
Identity = 57/216 (26.39%), Postives = 97/216 (44.91%), Query Frame = 3
Query:   84 VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYF---KEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  AC+ WGFF+++NHG P EL   +E+  K  + + +E++ K   + V        +      DW+  +        FL   P+ +  E+       P+    +R + +D+A  +EK                   L+  F   K      +   YPPCP  +L  G+  H D G + +L QDD V GLQ+ K  + +WI V P+  + +I++G+
Sbjct:   24 INDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFK---ELVASKALEGIQAEVTDMDWESTY--------FLRHLPQSNISEV-------PDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DDQWIDVPPMKHSIVINLGD 219          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.142e-14
Identity = 70/251 (27.89%), Postives = 98/251 (39.04%), Query Frame = 3
Query:   30 DEIPVIDLSTDPKQ---LVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEV--HPMGYHDQ--EHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTF-------------LRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGEA 722
            D  P +D S+  +Q    V  V  A   WG   +  HG P+EL  R+  A   FF  P+++K+    D       GY  +   +T   R+W++   F L  P  L       D  L      WP YP  +     D+ R   +                 DR     K  TT              L+ NYYP CP PELA+GV  H D  AL+ +  + V GLQ+       W+     P   I+ +G+A
Sbjct:   62 DISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYL-FHLVHPDGLA------DHAL------WPAYPPDYIAATRDFGRRT-RDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQV--LHGARWVTARHEPGTIIVHVGDA 296          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.948e-14
Identity = 66/223 (29.60%), Postives = 99/223 (44.39%), Query Frame = 3
Query:   93 ACQKWGFFQVINHGAPSELKARIEKAAKE----FFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKE---------QTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            AC+ WGFF+++NHG   EL  R+E   KE    F +Q  +E      D V  +   D ++     DW+  F        FL   P  +        +Q P+     R   +++ARE+EK                    +GY K           T   + + YPPCP P+L  G+  H D G + +L QDD V GLQ+ K  + EWI V P+  + +++IG+
Sbjct:   29 ACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEFASKTLDSVENV---DPDNL----DWESTF--------FLRHLPTSN-------ISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLE----KGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DREWIEVPPLRYSIVVNIGD 223          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.544e-14
Identity = 67/235 (28.51%), Postives = 109/235 (46.38%), Query Frame = 3
Query:   36 IPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREV-EKXXXXXXXXXXXXXXXXADRLQGYFKEQ--TTFLRFNYYPPCPYPE---LALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGEA 722
            IPV++L+ DP+     +  AC+++GFF+V+NHG   EL  R+E+ A  FF  P   K +    E  P GY ++    N        D    +   L A+P+    +   +  Q P+    FRE  E+Y +E+ E                  D L    +++   + LR N+YP         + +G G H D   ++VL  ++  GLQI  K +G W+ V P   ++ I++G+A
Sbjct:   31 IPVVNLA-DPEAKT-RIVKACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLPQSLKNRAGPPE--PYGYGNKRIGPN-------GDVGWIEYLLLNANPQLSSPKTSAVFRQTPQI---FRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVK-DGSWVAVPPDHSSFFINVGDA 250          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 65/225 (28.89%), Postives = 97/225 (43.11%), Query Frame = 3
Query:   93 ACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDD------KELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKE---------QTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            AC+ WG ++++NHG   EL  R+E   KE + +  E  Q+ K      +   +    +N+ DW+  F       + +   P+ DD      KE         E  L    LCED   E                       +GY K+          T   + + YPPCP PEL  G+  H D G + +L QDD V GLQ+ K  +GEWI V P+  + +++IG+
Sbjct:   29 ACENWGLYELLNHGISHELMNRVETVNKEHYRRFRE--QRFKEFASKTLDTVENVEPENL-DWESTFFLRHLPTSNISQIPDLDDDCRSTMKEFALELENLAERLLDL--LCEDLGLE-----------------------KGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DGEWIDVPPVRHSIVVNIGD 223          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14
Identity = 71/240 (29.58%), Postives = 106/240 (44.17%), Query Frame = 3
Query:   36 IPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVR-DWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEK-XXXXXXXXXXXXXXXXADRLQGYFKEQTT--FLRFNYYPPCPYP-------ELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGEA 722
            IPVID+S DP+     V  AC+ +GFF+VINHG  +EL + +E    +FF  P  EK +V     +P GY + +  +N    W E   + L +           D     L     + P  FR   E+Y   V K                  + L     +Q T   LR N+YPPCP         +  +G G H D   ++VL  ++  GLQI   ++G WI V P   ++  ++G++
Sbjct:   18 IPVIDMS-DPESKHALV-KACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKTQVAG---YPFGYGNSKIGRNGDVGWVE---YLLMNAN--------HDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQI-NLNDGSWISVPPDHTSFFFNVGDS 240          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.069e-12
Identity = 57/212 (26.89%), Postives = 93/212 (43.87%), Query Frame = 3
Query:   93 ACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEE--KQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDD-VGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            AC+ WGFF+++NHG   E   + E   KE + +      +Q+ K      +   +     N+ DW+  F       + +   P+ D+       +   E+ LG  +L E     + +                +D L       T   + + YPPCP PEL  G+  H D G + +L QDD V GLQ+ K  + EWI V P+  + +++IG+
Sbjct:   19 ACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGDNL-DWESTFFLRHLPTSNISQVPDLDED----CGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLP------TFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLK--DEEWIDVPPMRHSIVVNIGD 217          
The following BLAST results are available for this feature:
BLAST of DY259789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
G3OX3_ARATH2.301e-1525.83Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
GSL_ARATH3.005e-1526.81Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G2OX_PHACN5.126e-1528.99Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
ACCO_DIOKA5.126e-1526.391-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
LDOX_MAIZE1.142e-1427.89Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
ACCO2_DORSP1.948e-1429.601-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
G2OX2_ARATH2.544e-1428.51Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
ACCO1_DORSP3.323e-1428.891-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
G2OX1_ARATH4.340e-1429.58Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
ACCO_DENCR1.069e-1226.891-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259789 ID=DY259789; Name=DY259789; organism=Citrus clementina; type=EST; length=915bp
CAAAGGTTCAAAACATTATGGAAATAGATGATGAAATCCCAGTTATTGAT
CTCTCTACCGACCCCAAACAACTTGTCTTGGAAGTTGGCCATGCATGTCA
AAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGCCATCAGAATTAA
AGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGATCAACCAATAGAG
GAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCATGA
CCAGGAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTTTT
GGTTGCAAGATCCAACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATAAG
GAGCTGAGGAGGCTCACTAACCAATGGCCTGAGTACCCTCTTGGATTTAG
GGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGCTAGCTTACAAGT
TACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGATCGGTTGCAA
GGCTATTTTAAAGAACAAACAACCTTTCTGCGATTCAACTACTATCCTCC
TTGCCCTTATCCTGAGCTAGCTCTGGGCGTCGGTCCACACAAAGATGGAG
GTGCCTTAACGGTACTTGCTCAAGATGACGTTGGTGGACTTCAAATAAAG
AAGAAATCAAATGGAGAGTGGATTCCTGTTTAACCAATCCCAGATGCCTA
TATTATTAGCATTGGTGAAGCCCCCCCAGTTTGGAACCAATGATAATTAT
GAAAGTCCAAACCCCAAAGTGGTGGGTCAACCCTAAAAAAGGAAAGTTTT
TCGATTCCATTTCTTTCTTCTACCCGCCCAACAACTCATGATGTAAGCTT
TGTAATAAATTTGAAAAAAAGCCAACTCCCGCCAGGGAACGGCAATCTCG
GCGGGGCAAACTCCG
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