DY259794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_XENLA (Actin, cytoplasmic 1 OS=Xenopus laevis GN=actb PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_TRIVU (Actin, cytoplasmic 1 OS=Trichosurus vulpecula GN=ACTB PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_SPECI (Actin, cytoplasmic 1 OS=Spermophilus citellus GN=ACTB PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_SIGHI (Actin, cytoplasmic 1 OS=Sigmodon hispidus GN=ACTB PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTIYPGIADRMQKEITALAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_SHEEP (Actin, cytoplasmic 1 OS=Ovis aries GN=ACTB PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_SALSA (Actin, cytoplasmic 1 OS=Salmo salar GN=actb PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_RAT (Actin, cytoplasmic 1 OS=Rattus norvegicus GN=Actb PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_RABIT (Actin, cytoplasmic 1 OS=Oryctolagus cuniculus GN=ACTB PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_PONAB (Actin, cytoplasmic 1 OS=Pongo abelii GN=ACTB PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTB_PIG (Actin, cytoplasmic 1 OS=Sus scrofa GN=ACTB PE=2 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 3.350e-16 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM G+ E ++ C + LY + +L+GG+T++P A+R+++E+ L P ++KI E Sbjct: 252 NERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334 HSP 2 Score: 40.0466 bits (92), Expect = 3.350e-16 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++K EY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375 The following BLAST results are available for this feature:
BLAST of DY259794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259794 ID=DY259794; Name=DY259794; organism=Citrus clementina; type=EST; length=1076bpback to top |