DY259794

Overview
NameDY259794
Unique NameDY259794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1076
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT_CANDC (Actin OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=ACT1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.870e-17
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 1 
Query:   10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            N RF  PE +F+PADLG+  AG+ +    ++  C   +   LY +I+++GG+T+FP  AER+++E+  L P   +VKI    E
Sbjct:  253 NERFRAPEALFRPADLGLEAAGIDQTTFNSIMKCDMDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAPPE 335

HSP 2 Score: 38.1206 bits (87), Expect = 1.870e-17
Identity = 17/37 (45.95%), Postives = 24/37 (64.86%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M ++K EY+E+G +    + F
Sbjct:  340 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHHKCF 376
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT_CANAL (Actin OS=Candida albicans GN=ACT1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.870e-17
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 1 
Query:   10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            N RF  PE +F+PADLG+  AG+ +    ++  C   +   LY +I+++GG+T+FP  AER+++E+  L P   +VKI    E
Sbjct:  253 NERFRAPEALFRPADLGLEAAGIDQTTFNSIMKCDMDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAPPE 335

HSP 2 Score: 38.1206 bits (87), Expect = 1.870e-17
Identity = 17/37 (45.95%), Postives = 24/37 (64.86%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M ++K EY+E+G +    + F
Sbjct:  340 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHHKCF 376
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT22_DICDI (Putative actin-22 OS=Dictyostelium discoideum GN=act22 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.870e-17
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1 
Query:   10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            N RF  PE +FQP+ LGM  AG+ E    ++  C   +   LY +++L+GG+T+FP  A+R+ +EL  L P   ++KI    E
Sbjct:  253 NERFRCPEALFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTSLAPSTMKIKIVAPPE 335

HSP 2 Score: 40.0466 bits (92), Expect = 1.870e-17
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M ++K EY+E+G +   R+ F
Sbjct:  340 VWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 376
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT7_SOLTU (Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.431e-17
Identity = 30/81 (37.04%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            RF  PE++FQP+ +GM  AG+ E    ++  C   +   LY +I+L+GGST+FP  A+R+ +E+  L P   ++K+    E
Sbjct:  256 RFRCPEVLFQPSTIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPE 336

HSP 2 Score: 40.0466 bits (92), Expect = 2.431e-17
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M + KAE++E+G +   R+ F
Sbjct:  341 VWIGGSILASLSTFQQMWIAKAEFDESGPSIVHRKCF 377
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.431e-17
Identity = 30/81 (37.04%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            RF  PE++FQP+ +GM  AG+ E    ++  C   +   LY +I+L+GG+T+FP  A+R+ +EL  L P   ++K+    E
Sbjct:  256 RFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPE 336

HSP 2 Score: 41.5874 bits (96), Expect = 2.431e-17
Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M + KAEY+E+G +   R+ F
Sbjct:  341 VWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACTC_BIOPF (Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.432e-17
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1 
Query:   10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            N RF  PE +FQP+ LGM  AG+ E    ++  C   +   LY + +L+GGST+FP  A+R+++E+  L P   ++KI    E
Sbjct:  253 NERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335

HSP 2 Score: 40.0466 bits (92), Expect = 2.432e-17
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M ++K EY+E+G +   R+ F
Sbjct:  340 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT1_HELTB (Actin CyI, cytoplasmic OS=Heliocidaris tuberculata PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.432e-17
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1 
Query:   10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            N RF  PE +FQP+ LGM  AG+ E    ++  C   +   LY + +L+GGST+FP  A+R+++E+  L P   ++KI    E
Sbjct:  253 NERFRAPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335

HSP 2 Score: 40.0466 bits (92), Expect = 2.432e-17
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M ++K EY+E+G +   R+ F
Sbjct:  340 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT1_HELER (Actin CyI, cytoplasmic OS=Heliocidaris erythrogramma PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.432e-17
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1 
Query:   10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            N RF  PE +FQP+ LGM  AG+ E    ++  C   +   LY + +L+GGST+FP  A+R+++E+  L P   ++KI    E
Sbjct:  253 NERFRAPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335

HSP 2 Score: 40.0466 bits (92), Expect = 2.432e-17
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M ++K EY+E+G +   R+ F
Sbjct:  340 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT1_DICDI (Major actin OS=Dictyostelium discoideum GN=act1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.432e-17
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1 
Query:   10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            N RF  PE +FQP+ LGM  AG+ E    ++  C   +   LY +++L+GG+T+FP  A+R+ +EL  L P   ++KI    E
Sbjct:  253 NERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPE 335

HSP 2 Score: 40.0466 bits (92), Expect = 2.432e-17
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M ++K EY+E+G +   R+ F
Sbjct:  340 VWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 376
[Close]
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT10_DICDI (Actin-10 OS=Dictyostelium discoideum GN=act10 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.432e-17
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1 
Query:   10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
            N RF  PE +FQP+ LGM  AG+ E    ++  C   +   LY +++L+GG+T+FP  A+R+ +EL  L P   ++KI    E
Sbjct:  253 NERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPE 335

HSP 2 Score: 40.0466 bits (92), Expect = 2.432e-17
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 
Query:  357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
            VW GGS+LAS   FQ M ++K EY+E+G +   R+ F
Sbjct:  340 VWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 376
The following BLAST results are available for this feature:
BLAST of DY259794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
ACT_CANDC1.870e-1738.55Actin OS=Candida dubliniensis (strain CD36 / CBS 7... [more]
ACT_CANAL1.870e-1738.55Actin OS=Candida albicans GN=ACT1 PE=3 SV=1[more]
ACT22_DICDI1.870e-1738.55Putative actin-22 OS=Dictyostelium discoideum GN=a... [more]
ACT7_SOLTU2.431e-1737.04Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1[more]
ACT3_SOLTU2.431e-1737.04Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1[more]
ACTC_BIOPF2.432e-1738.55Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 ... [more]
ACT1_HELTB2.432e-1738.55Actin CyI, cytoplasmic OS=Heliocidaris tuberculata... [more]
ACT1_HELER2.432e-1738.55Actin CyI, cytoplasmic OS=Heliocidaris erythrogram... [more]
ACT1_DICDI2.432e-1738.55Major actin OS=Dictyostelium discoideum GN=act1 PE... [more]
ACT10_DICDI2.432e-1738.55Actin-10 OS=Dictyostelium discoideum GN=act10 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259794 ID=DY259794; Name=DY259794; organism=Citrus clementina; type=EST; length=1076bp
GACTTGACAAATGTACGCTTTCTTGTCCCAGAGATGATCTTTCAACCTGC
AGATTTGGGAATGAACCAGGCTGGACTAGCTGAGTGCATTGTTCGAGCTG
TTAATTCTTGCCATCCTTATCTTCATTCTGTACTTTATGAAAGCATTATA
TTAACTGGTGGAAGCACGTTATTCCCTCGATTTGCTGAAAGACTAGAAAG
GGAGCTTCGGCCTCTAGTCCCTGATGACTATCAAGTGAAAATAACAACCC
AAGAAGAGTATTCACATCCTCCTTAAAATACTAATGACTTTTTCTTTAGA
AGTTACTTCTTCCCAATTGGTAAAACATTTTCGTGCTTTCCAGTCCCTTA
TTAGGTGTCTGGCGAGGAGGATCACTTTTGGCTTCCAGTCCTGATTTTCA
AGCAATGTGTGTCACCAAGGCTGAGTATGAGGAGAATGGATCTGCTCGAT
GTCGCAGGCGATTCTTTCATTGACTTCAAATATTTCTAAAGCTTTGTGGC
AATTAAATGGTGCACGAGGACTTAAGCTGCCGTGGATGCACTGTCTTCTG
TTGAACAAAACAAGGTGGATCCAGGTTTTGATGCCTTGTAAATGTTGGGA
AAACATCTGGACTTCTACACACAGCTTGTCCGGGTATTGGAACAGAGAAA
ATATGGCACCTTGGCAGTTTCACCCTCTCAAGGTGATGGGTCGAGGTTTA
ATCCCTTGGCTATAGAAAGTGACTGACATGCTCAAATCCCGGATCATTCA
AACCCAAAGGCAAAACTAAACAAACGGGATCCCCCCCATTATGGAAGGTC
CCCCCTGGTACCGGGTTAAAACCCCTTTTGTTGAAACCCTTCTTTCCCCC
CCCTCCATTTGTTTTTTTACCAGGTGGGCCCCTAAAGGGAGGAAAGGGTG
AAACAGGGGGAAGTCCATTTCTCGGAAAATTTTTTTGTAATTTGGGGCTT
TTTTTCTCACCCTTTTGAATAAAAATGTAAAAACCAAAAGCCCTTGAAAA
AAAATTCTTGCTTCCTTCCCTTTAAACTCCAAAGGGTTGGGGGATATACC
CTTTAAAGGGGGGGAGCAACCTCAAA
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