DY259794
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT2_PLAYO (Actin-2 OS=Plasmodium yoelii yoelii GN=PY01545 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 3.188e-12 Identity = 25/81 (30.86%), Postives = 42/81 (51.85%), Query Frame = 1
Query: 16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
RF PE +F P+ +G GL +++ C + LY +I+L+GG+T++ ERL E+ L P ++K+ E
Sbjct: 255 RFRCPEALFNPSLIGRECPGLHITAYQSIMKCDIDIRKELYNNIVLSGGTTMYNYIGERLTNEMTNLAPPSMKIKVIAPPE 335 HSP 2 Score: 40.4318 bits (93), Expect = 3.188e-12 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
VW GGS+L+S FQ M +TK EY+E+G + R+ F
Sbjct: 340 VWIGGSILSSLSTFQKMWITKEEYDESGPSIVHRKCF 376
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT6_TOBAC (Actin-103 (Fragment) OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.199e-12 Identity = 30/81 (37.04%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
RF PE++FQP+ +GM AG+ E ++ C + LY +I+L+GGST+FP A+R+ +E+ L P ++K+ E
Sbjct: 236 RFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPE 316 HSP 2 Score: 23.483 bits (49), Expect = 3.199e-12 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQ 401
VW GGS+LAS FQ
Sbjct: 321 VWIGGSILASLSTFQ 335
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP3_ARATH (Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1) HSP 1 Score: 47.3654 bits (111), Expect = 4.123e-12 Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 3
Query: 333 VLSSPL--LGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCR 455
V+S P+ VW GGS+L+S+P+F A C TK EYEE G++ CR
Sbjct: 376 VVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASICR 418 HSP 2 Score: 45.0542 bits (105), Expect = 4.123e-12 Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 1
Query: 1 DLTNVRFLVPEMIFQPADLGMN-QAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLV 219
D+ RFL PE+ F P + L I + + S LY++I+L+GGST+F F RL+R+L+ +V
Sbjct: 279 DVGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIV 352
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP3_TAKRU (Actin-related protein 3 OS=Takifugu rubripes GN=actr3 PE=3 SV=1) HSP 1 Score: 47.3654 bits (111), Expect = 4.126e-12 Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 1 DLTNVRFLVPEMIFQP--ADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQ 252
D+ RFL PE+ F P A+ Q ++E + + +C + LY++I+L+GGST+F F RL+R+L+ V D ++K++ +
Sbjct: 270 DVGYERFLGPEIFFHPEFANPDFTQP-ISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTV--DARLKMSEE 352 HSP 2 Score: 45.0542 bits (105), Expect = 4.126e-12 Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCR 455
VW GGS+LAS+P+F +C TK +YEE G + CR
Sbjct: 377 VWFGGSMLASTPEFYQVCHTKKDYEEIGPSICR 409
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT1_OXYTR (Actin, cytoplasmic OS=Oxytricha trifallax PE=3 SV=1) HSP 1 Score: 48.1358 bits (113), Expect = 5.375e-12 Identity = 23/77 (29.87%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 16 RFLVPEMIFQPADL-GMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKI 243
RF PE +F+P ++ G + + +++ C + LY++IIL+GG+T++ ERL +E+ P VK+
Sbjct: 253 RFRCPEYLFKPLEMNGRELDSIQDLTYKSIQECDVDVRRDLYQNIILSGGTTMYEGIGERLLKEIENRAPKSINVKV 329 HSP 2 Score: 43.8986 bits (102), Expect = 5.375e-12 Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 3
Query: 324 NIFVLSSP--LLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRR 461
N+ V++SP VWRGGS L S F +M +TK +Y+ENG++ R+
Sbjct: 326 NVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRK 373
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT2_OXYFA (Actin, cytoplasmic OS=Oxytricha fallax PE=3 SV=1) HSP 1 Score: 48.1358 bits (113), Expect = 5.383e-12 Identity = 23/77 (29.87%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 16 RFLVPEMIFQPADL-GMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKI 243
RF PE +F+P ++ G + + +++ C + LY++IIL+GG+T++ ERL +E+ P VK+
Sbjct: 235 RFRCPEYLFKPLEMNGRELDSIQDLTYKSIQECDVDVRRDLYQNIILSGGTTMYEGIGERLLKEIENRAPKSINVKV 311 HSP 2 Score: 43.8986 bits (102), Expect = 5.383e-12 Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 3
Query: 324 NIFVLSSP--LLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRR 461
N+ V++SP VWRGGS L S F +M +TK +Y+ENG++ R+
Sbjct: 308 NVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRK 355
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT1_OXYFA (Actin, macronuclear OS=Oxytricha fallax PE=3 SV=1) HSP 1 Score: 48.1358 bits (113), Expect = 5.383e-12 Identity = 23/77 (29.87%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 16 RFLVPEMIFQPADL-GMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKI 243
RF PE +F+P ++ G + + +++ C + LY++IIL+GG+T++ ERL +E+ P VK+
Sbjct: 235 RFRCPEYLFKPLEMNGRELDSIQDLTYKSIQECDVDVRRDLYQNIILSGGTTMYEGIGERLLKEIENRAPKSINVKV 311 HSP 2 Score: 43.8986 bits (102), Expect = 5.383e-12 Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 3
Query: 324 NIFVLSSP--LLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRR 461
N+ V++SP VWRGGS L S F +M +TK +Y+ENG++ R+
Sbjct: 308 NVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRK 355
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT2_SOLTU (Actin-46 (Fragment) OS=Solanum tuberosum PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.394e-12 Identity = 29/81 (35.80%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
RF PE+++QP+ +GM AG+ E ++ C + LY +I+L+GGST+FP A+R+ +E++ L P ++K+ E
Sbjct: 236 RFRCPEVLYQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIQALAPSSMKIKVVAPPE 316 HSP 2 Score: 23.483 bits (49), Expect = 5.394e-12 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQ 401
VW GGS+LAS FQ
Sbjct: 321 VWIGGSILASLSTFQ 335
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT2_SOLLC (Actin-51 (Fragment) OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.394e-12 Identity = 30/81 (37.04%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
RF PE++FQP+ +GM AG+ E ++ C + LY +I+L+GGST+FP A+R+ +E+ L P ++K+ E
Sbjct: 236 RFGCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPE 316 HSP 2 Score: 23.483 bits (49), Expect = 5.394e-12 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQ 401
VW GGS+LAS FQ
Sbjct: 321 VWIGGSILASLSTFQ 335
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT27_DICDI (Putative actin-27 OS=Dictyostelium discoideum GN=act27 PE=3 SV=2) HSP 1 Score: 54.299 bits (129), Expect = 6.980e-12 Identity = 26/81 (32.10%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 19 FLVPEMIFQP-ADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
F PE++F P A G N G+ + I ++ C+ +H+ LY +++L+GGST+FP R+ + L L P ++ I + +
Sbjct: 238 FACPEVLFLPYAFFGTNLDGIDKAIYNSIMKCNDDIHNDLYGNVVLSGGSTMFPGIEYRMYKGLTQLAPSTTEIVINAEPD 318 HSP 2 Score: 37.3502 bits (85), Expect = 6.980e-12 Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENG 440
VW GGS+L P+FQ +C+ K +Y+E G
Sbjct: 323 VWIGGSILGLVPNFQELCIDKEDYDEYG 350 The following BLAST results are available for this feature:
BLAST of DY259794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259794 ID=DY259794; Name=DY259794; organism=Citrus clementina; type=EST; length=1076bpback to top |