DY259794
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT4_TOBAC (Actin-66 (Fragment) OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.181e-11 Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
RF PE++FQP+ +GM AG+ E ++ C + LY +I+L+GG+T+FP A+R+ +E+ L P ++K+ E
Sbjct: 236 RFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPE 316 HSP 2 Score: 23.483 bits (49), Expect = 1.181e-11 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQ 401
VW GGS+LAS FQ
Sbjct: 321 VWIGGSILASLSTFQ 335
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT_HISCA (Actin OS=Histriculus cavicola PE=3 SV=2) HSP 1 Score: 46.595 bits (109), Expect = 1.527e-11 Identity = 24/77 (31.17%), Postives = 40/77 (51.95%), Query Frame = 1
Query: 16 RFLVPEMIFQPADL-GMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKI 243
RF PE +F+P ++ G + + +++ C + LY++IIL+GGST ERL +E+ P VK+
Sbjct: 253 RFRCPEYLFKPLEMNGKELDSIQDLTYKSIQECDVDVRRDLYQTIILSGGSTSIEGIGERLLKEIENRAPKSINVKV 329 HSP 2 Score: 43.8986 bits (102), Expect = 1.527e-11 Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 3
Query: 324 NIFVLSSP--LLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRR 461
N+ V++SP VWRGGS L S F +M +TK +Y+ENG++ R+
Sbjct: 326 NVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRK 373
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT1_SOLTU (Actin-42 (Fragment) OS=Solanum tuberosum PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.533e-11 Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
RF PE++FQP+ +GM AG+ E ++ C + LY +I+L+GG+T+FP A+R+ +E+ L P ++K+ E
Sbjct: 232 RFRCPEVLFQPSIIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPCSMKIKVVAPPE 312 HSP 2 Score: 23.483 bits (49), Expect = 1.533e-11 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQ 401
VW GGS+LAS FQ
Sbjct: 317 VWIGGSILASLSTFQ 331
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT_CALFI (Actin (Fragment) OS=Calanus finmarchicus PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.003e-11 Identity = 28/83 (33.73%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
N RF PE +FQP+ LGM G+ E ++ C + LY + +++GG+T++P A+R+++E+ L P ++KI E
Sbjct: 174 NERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 256 HSP 2 Score: 25.0238 bits (53), Expect = 2.003e-11 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQAM 407
VW GGS+LAS FQ M
Sbjct: 261 VWIGGSILASLSTFQQM 277
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT_CRAVI (Actin (Fragment) OS=Crassostrea virginica PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.007e-11 Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
N RF PE +FQP+ LGM AG+ E +++ C + LY +I+L+GG+T+FP A+R+++E+ L P ++K+ E
Sbjct: 169 NERFRCPEAMFQPSFLGMESAGIHETSYQSIMKCDVDIRKDLYANIVLSGGTTMFPGIADRMQKEVTTLAPPTMKIKVIAPPE 251 HSP 2 Score: 20.7866 bits (42), Expect = 2.007e-11 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query: 357 VWRGGSLLAS 386
VW GGS+LAS
Sbjct: 256 VWIGGSILAS 265
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSJ (Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3 PE=2 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 2.563e-11 Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 3
Query: 333 VLSSPL--LGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCR 455
V+S P+ VW GGS+LAS+ +F C TKAEYEE G++ CR
Sbjct: 377 VVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASICR 419 HSP 2 Score: 43.5134 bits (101), Expect = 2.563e-11 Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 1
Query: 1 DLTNVRFLVPEMIFQPADLGMN-QAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLV 219
D+ RFL PE+ F P + L I + + S LY++I+L+GGST+F F RL+R+L+ +V
Sbjct: 280 DIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIV 353
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSI (Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2 SV=2) HSP 1 Score: 46.2098 bits (108), Expect = 2.563e-11 Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 3
Query: 333 VLSSPL--LGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCR 455
V+S P+ VW GGS+LAS+ +F C TKAEYEE G++ CR
Sbjct: 377 VVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASICR 419 HSP 2 Score: 43.5134 bits (101), Expect = 2.563e-11 Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 1
Query: 1 DLTNVRFLVPEMIFQPADLGMN-QAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLV 219
D+ RFL PE+ F P + L I + + S LY++I+L+GGST+F F RL+R+L+ +V
Sbjct: 280 DIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIV 353
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT_CHOCR (Actin OS=Chondrus crispus GN=AC PE=2 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 3.342e-11 Identity = 23/81 (28.40%), Postives = 43/81 (53.09%), Query Frame = 1
Query: 16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
RF PE +F+P LG+ G+ ++ + LY +I+++GG+T+F A R+++E+ L P ++K+ E
Sbjct: 252 RFQCPEALFKPELLGIEMDGMHLTAFNSIMKTDIDIRKDLYSNIVMSGGTTMFAGIASRVQKEIETLAPPSMKIKVIAPPE 332 HSP 2 Score: 38.5058 bits (88), Expect = 3.342e-11 Identity = 18/37 (48.65%), Postives = 24/37 (64.86%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467
VW GGS+L+S FQ M V+K EY+E G + R+ F
Sbjct: 337 VWIGGSILSSLSTFQQMWVSKTEYDEMGPSVVHRKCF 373
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: YGEC_SCHPO (Uncharacterized actin family protein C1347.12 OS=Schizosaccharomyces pombe GN=SPBC1347.12 PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 4.336e-11 Identity = 31/83 (37.35%), Postives = 43/83 (51.81%), Query Frame = 1
Query: 19 FLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEEYSH 267
F PE++F P +G +GL + +++ L S LY +I+L+GGSTL F ER ELR + QVKI E H
Sbjct: 260 FSAPEVLFNPEMMGSEASGLHIQLFKSILLSDIDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKNQVKIYASPERMH 342 HSP 2 Score: 35.039 bits (79), Expect = 4.336e-11 Identity = 16/46 (34.78%), Postives = 25/46 (54.35%), Query Frame = 3
Query: 327 IFVLSSPLLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRF 464
I+ + W GGS+LAS F+ + +T EY+ + + RRRF
Sbjct: 334 IYASPERMHNAWLGGSILASLSTFRRLLITSEEYKNDQNVIFRRRF 379
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT7_TOBAC (Actin-104 (Fragment) OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 4.353e-11 Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 16 RFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258
RF PE++FQP+ +GM AG+ E ++ + LY +I+L+GGST+FP A+R+ +E+ L P ++K+ E
Sbjct: 236 RFRCPEVLFQPSFIGMEAAGIHETTYNSIMKSDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPE 316 HSP 2 Score: 23.483 bits (49), Expect = 4.353e-11 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query: 357 VWRGGSLLASSPDFQ 401
VW GGS+LAS FQ
Sbjct: 321 VWIGGSILASLSTFQ 335 The following BLAST results are available for this feature:
BLAST of DY259794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259794 ID=DY259794; Name=DY259794; organism=Citrus clementina; type=EST; length=1076bpback to top |