DY259795

Overview
NameDY259795
Unique NameDY259795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length953
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY259795_ssr183 microsatellite DY259795_ssr183:183..194. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1310 contig Ccv1_Contig1310:1..954. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: RCC2_MOUSE (Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.205e-16
Identity = 62/220 (28.18%), Postives = 109/220 (49.55%), Query Frame = 3
Query:  306 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT------------EDSLVPQKLQAFEE------------VSIKMVAAGAEHSVAVAEKENSMDGG-GALMEIWV**KKDPLIPEKV 887
            A+HS+ + +   + SWGR E GQLGHGD +   +P  + AL    IV   CG +HT A +++   V+++G    G+LG GN +D   P P + +++ + + ++ACG    + +  +G + S+G  + GQLG  +             +  LVP+++  F E            V ++ VA GA H++ +  ++     G G    +    +KD ++P  V
Sbjct:  157 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT-GSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV 374          

HSP 2 Score: 72.4034 bits (176), Expect = 4.303e-12
Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = 3
Query:  417 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAEKEN 812
            LS +    +VS +C A      +E   +++SWG  + G+LGHG++  +  P  I+AL    +   ACG +H LA+T  G V ++G N+ GQLGLG   D++       +    I  +A GAE S+ +  K N
Sbjct:  143 LSGVRVRTVVSGSCAAHSLLITTEG--KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGN 272          
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: NEK8_MOUSE (Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.205e-16
Identity = 58/182 (31.87%), Postives = 87/182 (47.80%), Query Frame = 3
Query:  294 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSD--------------LFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAV 797
            ++ GASH +AL +   + +WGRG+ G+LG G  E    P Q+    G E   V CG D +   + S  +V + G   F +LG  + S                FTPL    L    +  +  G +H  A+T  G+  ++G NQ+GQLG  +   S  P ++Q  E + + MVA G   +VAV
Sbjct:  454 VACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILT-SPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV 634          

HSP 2 Score: 84.3445 bits (207), Expect = 1.094e-15
Identity = 49/152 (32.24%), Postives = 73/152 (48.03%), Query Frame = 3
Query:  294 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEE 749
            ++ G   +  L    I+ ++G G +G LGHG+  D   PT + AL G+E+V V CGA H  A S    ++++WG GD GRLG G       P  +        +++ CG    + +T  G V + G N+  +LGL        P   Q  EE
Sbjct:  402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTD-GELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEE 552          

HSP 3 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 3
Query:  417 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSV 791
            L    G  I  V CG   T   ++  + + ++G G  G LGHGN +D+  P  ++AL    + Q+ACG SH LA++ +GE+ +WGR   G+LGLGT E    PQ++        + V  G + S+
Sbjct:  391 LEGQSGVTIKHVACGDLFTACLTDRGI-IMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSM 514          
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: RCC2_DANRE (Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.879e-16
Identity = 62/220 (28.18%), Postives = 107/220 (48.64%), Query Frame = 3
Query:  306 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT------------EDSLVPQKLQAFEE------------VSIKMVAAGAEHSVAVAEKENSMDGG-GALMEIWV**KKDPLIPEKV 887
            A+HS+ + +   + SWGR + GQLGHGD +   +P  +  L    IV+  CG +HT A +E+   VY++G    G+LG GN +D + +P  I+  +   + ++ACG    + V  +G + S+G  + GQLG  +             +  L+P+++  F E            V  + VA GA H++ +  ++     G G    +    +KD ++P  V
Sbjct:  132 AAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN-GTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV 349          

HSP 2 Score: 73.559 bits (179), Expect = 1.931e-12
Identity = 49/137 (35.77%), Postives = 70/137 (51.09%), Query Frame = 3
Query:  402 LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAEKEN 812
            LS  Q+S      +VS  C A      +E   +++SWG  D G+LGHG++  L  P  I+ L    +   ACG +H LA+T  G V ++G N+ GQLG G   D+++      +    I  VA GAE S+ V  K N
Sbjct:  118 LSDVQVSC-----VVSGPCAAHSLIITTEG--KLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGN 247          

HSP 3 Score: 68.5514 bits (166), Expect = 6.213e-11
Identity = 48/181 (26.52%), Postives = 84/181 (46.41%), Query Frame = 3
Query:  294 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALD--GHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQN-GQLGLGTT--EDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAEKENSMD 821
            ++ GA+H++ L S   V SWG G  G+LGH + +D + P  +   D  G     + CG   + A SE    ++ WG  +  R           P  ++ L   +++ +ACG S  + V  +    SWG +   G+LG G    + S   Q+++  + V  + V  G  HS+ +A ++   +
Sbjct:  308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSE-MGGLFFWGVTNTSR------ESTMYPKAVQDLCGWKIRSLACGKS-SIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQDTEQE 480          
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: RCC1_SCHPO (Protein pim1 OS=Schizosaccharomyces pombe GN=pim1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.912e-16
Identity = 65/192 (33.85%), Postives = 97/192 (50.52%), Query Frame = 3
Query:  285 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR------LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLG--------------HGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLG-TTEDSLVPQ--KLQAFEEVSIKMVAAGAEHSV 791
            ++ + AG+ HS A+ +   V +WG     Q G  + ED         PT + AL+G+ + S+T G  HT A  E   +V +WG  D  +LG               GN+  L TP  I  L +  V Q+ CG  H LAVT +G+V SWG  +N ++G G   ED  VP   + +A +EV+I++  AG + S+
Sbjct:  281 IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGI-EVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDG-RVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVAIRVAGAGGQFSI 468          
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: NEK9_MOUSE (Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.415e-16
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 3
Query:  294 ISAGASHSVALLSGNIVCSW-----GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSS--DLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAE 782
            + AG +H   +     + +W     G    GQLGHGD      P  +  L G  I  V+CG D T   ++   Q+Y++G   +G +G    S  ++  P+ +    S  V+Q++CGD+H + +T   EV SWG  + G+LGL + ED   PQ++   + + I  V  G +
Sbjct:  374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEG-QLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCD 542          

HSP 2 Score: 69.707 bits (169), Expect = 2.789e-11
Identity = 47/188 (25.00%), Postives = 85/188 (45.21%), Query Frame = 3
Query:  294 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAE--DRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEV---------------SIKMVAAGAEHSVAVAEK 806
            +S G   +V +     + ++G    G +G       + L P QL+    + +  V+CG +H    + +  +VYSWG G++GRLG  +  D +TP  +    +L +  + CG      +T  G+V + G N+  +LGL      ++    +A+ EV                I+ +A G  H+ A+ E+
Sbjct:  431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINH--EAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDER 615          

HSP 3 Score: 69.707 bits (169), Expect = 2.789e-11
Identity = 49/159 (30.82%), Postives = 77/159 (48.43%), Query Frame = 3
Query:  282 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGN------SSDLFTPLP-------IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSL 719
            PV  +S G +H V L     V SWG GE G+LG    ED  +P ++       IV+V CG D T   ++S  +V + G  +F +LG         + + +  +P        K L   +++ IA G +H  A+   G + ++G N+ GQLG+G  +  L
Sbjct:  481 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQS-GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL 638          
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: NEK9_HUMAN (Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.415e-16
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 3
Query:  294 ISAGASHSVALLSGNIVCSW-----GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSS--DLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAE 782
            + AG +H   +     + +W     G    GQLGHGD      P  +  L G  I  V+CG D T   ++   Q+Y++G   +G +G    +  ++  P+ +    S  V+Q++CGD+H + +T   EV SWG  + G+LGL + ED   PQK+   + + I  V  G +
Sbjct:  374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEG-QLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCD 542          

HSP 2 Score: 69.707 bits (169), Expect = 2.789e-11
Identity = 47/188 (25.00%), Postives = 85/188 (45.21%), Query Frame = 3
Query:  294 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAE--DRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEV---------------SIKMVAAGAEHSVAVAEK 806
            +S G   +V +     + ++G    G +G       + L P QL+    + +  V+CG +H    + +  +VYSWG G++GRLG  +  D +TP  +    +L +  + CG      +T  G+V + G N+  +LGL      ++    +A+ EV                I+ +A G  H+ A+ E+
Sbjct:  431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINH--EAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDER 615          

HSP 3 Score: 69.707 bits (169), Expect = 2.789e-11
Identity = 49/159 (30.82%), Postives = 77/159 (48.43%), Query Frame = 3
Query:  282 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGN------SSDLFTPLP-------IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSL 719
            PV  +S G +H V L     V SWG GE G+LG    ED  +P ++       IV+V CG D T   ++S  +V + G  +F +LG         + + +  +P        K L   +++ IA G +H  A+   G + ++G N+ GQLG+G  +  L
Sbjct:  481 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQS-GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL 638          
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: RCC2_XENLA (Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.263e-15
Identity = 46/131 (35.11%), Postives = 74/131 (56.49%), Query Frame = 3
Query:  306 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLG 695
            A+HS+ +     + SWGR + GQLGHGD +    P  + +L G   V   CG +HT A +E+   VY++G    G+LG GN +D   P P + L++ + + ++ACG    + +  +G + S+G  + GQLG
Sbjct:  150 AAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN-GSVYAFGENKMGQLGLGNKTDA-VPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLG 278          

HSP 2 Score: 71.2478 bits (173), Expect = 9.586e-12
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 3
Query:  408 PTQLSALDGHEIVSVTCG--ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAEKEN 812
            P +   L G ++ SV  G  A H+   +    +++SWG  D G+LGHG+   +  P  I++L        ACG +H LA+T  G V ++G N+ GQLGLG   D++       +    I  VA GAE S+ +  K N
Sbjct:  130 PHRYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGN 265          
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: RPGR_CANFA (X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris GN=RPGR PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.695e-14
Identity = 52/169 (30.77%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  294 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAV 797
            +S G  H+  +   N +  +G    GQLG G       PT + AL   ++    CG +HT   +E   +VY+ G  + G+LG G++ +  T   I    S R +KQ++ G +   A+T +GE+  WG N  GQ+GL    +  VPQ++   + +S   ++ G  HS  V
Sbjct:   40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGG-KVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPIS--WISCGYYHSAFV 205          

HSP 2 Score: 76.6406 bits (187), Expect = 2.282e-13
Identity = 53/178 (29.78%), Postives = 94/178 (52.81%), Query Frame = 3
Query:  279 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNS--SDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAE 803
            R +  +SAG++ S AL     +  WG   +GQ+G  +  +   P Q++   G  I  ++CG  H +A+  +  Q+Y++G  + G+LG  N    +   P P+  +   +V Q+ACG  H + +T E  V ++G  Q GQLGLGT   ++ VP+ ++  ++  I  +A G  H+  + +
Sbjct:  140 RKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYH-SAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITD 312          

HSP 3 Score: 76.6406 bits (187), Expect = 2.282e-13
Identity = 50/179 (27.93%), Postives = 91/179 (50.84%), Query Frame = 3
Query:  279 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDA--EDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLG--TTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVA 800
            +P+  IS G  HS  + +   + ++G  E G+LG  +    +   P  +  + G ++V V CG  HT   +E    VY++G G FG+LG G    +   P  I+ +   ++  IACG++H   +T  G + ++G  ++G+LGLG   + +  +P     F    +++V+ G  H++  A
Sbjct:  190 KPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA--VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365          

HSP 4 Score: 73.1738 bits (178), Expect = 2.523e-12
Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = 3
Query:  450 VTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAF-EEVSIKMVAAGAEHSVAVAE 803
            ++CG +HT   + +  ++Y +G  ++G+LG G+ S +  P  +KAL   +VK  ACG +H L  T  G+V + G N  GQLGLG TE+      +  F  +  IK ++AG+  S A+ E
Sbjct:   40 LSCGDEHTAVVTGN-NKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157          
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: ALS2_RAT (Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 60/187 (32.09%), Postives = 92/187 (49.20%), Query Frame = 3
Query:  279 RPVLLISAGASHSVALLSGNIVCSWG----RGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKA-------LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV-PQKLQAFEEVSIKMVAAGAEHSVAVAE 803
            + VL  + G  H V L     V S+G    + E  ++         SP   SAL GH +V+V  G+ H+ A +ES + VY WG    G+    N   +  P P+         L ++R+ Q+ACG+ H LA+++  E+ +WG     QLGL TT   +  PQK++      +  VA GA HS+A+ +
Sbjct:   41 KTVLQAALGVKHGVLLTEDGEVYSFGTLPWKSEAAEICPS------SPLLESALVGHHVVTVATGSFHSGAVTESGV-VYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWG--TGCQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218          

HSP 2 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = 3
Query:  279 RPVLLISAGASHSVALLSG--NIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHSLRVKQIACGDSHCL 635
            R V+L    +  + ALL      V +WG+G++GQLGHGD   RL P  +  LDG E++ +  G  H+ A +    QVYSWG   FG+LGH   S+  T +P   K      V  +A G  + L
Sbjct:  499 RTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAK-SQVYSWGSNTFGQLGH---SEFPTTVPRLSKVSSESGVWSVAAGHGYSL 617          

HSP 3 Score: 69.3218 bits (168), Expect = 3.643e-11
Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 3
Query:  498 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAEKENSMDG 824
            +V++WG G  G+LGHG+      PL +K L    V  +  G SH LA+T + +V SWG N  GQLG  +   + VP+  +   E  +  VAAG  +S+ + + E+   G
Sbjct:  521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLG-HSEFPTTVPRLSKVSSESGVWSVAAGHGYSLFLVDTEDFQPG 628          
BLAST of DY259795 vs. ExPASy Swiss-Prot
Match: RPGR_HUMAN (X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens GN=RPGR PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.004e-14
Identity = 54/181 (29.83%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  279 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDA--EDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR---VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTE--DSLVPQKLQAFEEVSIKMVAAGAEHSVAVA 800
            +PV  IS G  HS  + +   +  +G  E+G+LG  +    +  +P  +S +   +++ V CG +HT   +E+   VY++G G FG+LG G    LF     K + ++R   +  I+CG++H   +T  G + ++G  ++G+LGLG     +  +P     F    +K+VA G  H V  A
Sbjct:  190 KPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLGTF--LFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365          

HSP 2 Score: 77.411 bits (189), Expect = 1.338e-13
Identity = 52/169 (30.77%), Postives = 82/169 (48.52%), Query Frame = 3
Query:  294 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS-LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEEVSIKMVAAGAEHSVAV 797
            +S G  HS  +   N +  +G    GQLG G       PT + AL   ++    CG +HT   +E    VY+ G  + G+LG G++ +  T   I    S  ++KQ++ G +   A+T +G +  WG N  GQ+GL    +  VPQ++   + VS   ++ G  HS  V
Sbjct:   40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEG-GNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVS--WISCGYYHSAFV 205          

HSP 3 Score: 74.7146 bits (182), Expect = 8.670e-13
Identity = 54/176 (30.68%), Postives = 89/176 (50.57%), Query Frame = 3
Query:  285 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDG-HEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT--TEDSLVPQKLQAFEEVSIKMVAAGAEHSVAVAE 803
            V L + G +H++    G  V + G   +GQLG GD E+R +   +S     H+I  ++ G++ + A +E   +++ WG    G++G  N S++  P  +       V  I+CG  H   VT +GE+  +G  +NG+LGL      +   PQ +    E  I+ VA G EH+V + E
Sbjct:   89 VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED-GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTVVLTE 260          

HSP 4 Score: 73.9442 bits (180), Expect = 1.479e-12
Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 3
Query:  444 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAF-EEVSIKMVAAGAEHSVAVAE 803
            V ++CG +H+   + +  ++Y +G  ++G+LG G+ S +  P  +KAL   +VK  ACG +H L  T  G V + G N  GQLGLG TE+      +  F  E  IK ++AG+  S A+ E
Sbjct:   38 VHLSCGDEHSAVVTGN-NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157          
The following BLAST results are available for this feature:
BLAST of DY259795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
RCC2_MOUSE2.205e-1628.18Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1[more]
NEK8_MOUSE2.205e-1631.87Serine/threonine-protein kinase Nek8 OS=Mus muscul... [more]
RCC2_DANRE2.879e-1628.18Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 S... [more]
RCC1_SCHPO4.912e-1633.85Protein pim1 OS=Schizosaccharomyces pombe GN=pim1 ... [more]
NEK9_MOUSE6.415e-1630.59Serine/threonine-protein kinase Nek9 OS=Mus muscul... [more]
NEK9_HUMAN6.415e-1630.59Serine/threonine-protein kinase Nek9 OS=Homo sapie... [more]
RCC2_XENLA9.263e-1535.11Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=... [more]
RPGR_CANFA2.695e-1430.77X-linked retinitis pigmentosa GTPase regulator OS=... [more]
ALS2_RAT4.597e-1432.09Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1[more]
RPGR_HUMAN6.004e-1429.83X-linked retinitis pigmentosa GTPase regulator OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259795 ID=DY259795; Name=DY259795; organism=Citrus clementina; type=EST; length=953bp
ACAGTTGTTAAAAAAAACTCTCTGGTGAGAGCCTAGTCTCGTCTTCTTTA
TGTGATGCACATGTGCAGCTATCTCAATCAATTTAAATATCTCTTACCCA
CTTTCTGATCATAATTCATTATCACCTTTCTCTCTTGGAACTGGAAGGAG
AAGCATAAGATCCCACTTCCATCTTTCGTTCGTTCTTTCTTTCTTCATCG
CTTGTAAGAAAAGAAACAATAGCAATGGCAGAGGCCTCTGCTGCGAGCGA
AGCCGCTAGTACCACTGCTGCTCCATTTCGTCCTGTTCTTCTCATCTCTG
CTGGTGCTAGTCACTCTGTTGCTCTACTCTCTGGAAACATTGTGTGCTCC
TGGGGACGAGGGGAGGATGGTCAGTTAGGTCATGGGGATGCTGAGGATCG
ACTTTCTCCTACTCAATTGAGTGCACTTGATGGCCATGAAATAGTATCTG
TTACTTGTGGAGCTGATCATACAACTGCGTACTCTGAGTCATGCATGCAA
GTTTATAGTTGGGGATGGGGTGACTTCGGGAGGTTGGGTCATGGCAATTC
TAGTGACTTGTTCACTCCTCTACCAATTAAAGCATTGCATAGTCTGAGGG
TAAAGCAAATTGCTTGTGGGGACAGCCATTGTTTAGCAGTGACTGTGGAA
GGAGAGGTGCAAAGCTGGGGGCGGAATCAAAATGGTCAACTAGGTCTCGG
CACCACTGAAGATTCCCTTGTGCCTCAAAAACTCCAGGCCTTTGAGGAAG
TATCAATCAAAATGGTTGCTGCTGGTGCTGAACATTCAGTTGCTGTTGCA
GAAAAGGAAAACTCCATGGATGGGGGCGGGGCCCTTATGGAAATTTGGGT
TTAGTGAAAAAAAGATCCCCTAATCCCTGAAAAAGTGCCCACGTCAATTT
CAAAAAAAAAAAATGGTTTGGTGTCTTGGGAATGAAAAACCCTATTCGGT
TCC
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