DY259796

Overview
NameDY259796
Unique NameDY259796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1184
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1311 contig Ccv1_Contig1311:1..1184. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_WUCBA (Translationally-controlled tumor protein homolog OS=Wuchereria bancrofti PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.396e-13
Identity = 59/179 (32.96%), Postives = 89/179 (49.72%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESMHD---DGCLVFAYYK--ERATDPTFLYMADALKE 540
            ML+++D  T DEL SDSFP K ++ G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I+     LLSK     LQFF+GE M +   +G +    Y+  E    P  + + +AL E
Sbjct:    1 MLIFKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSTEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLATFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIQAWVVSLLSKDRFKQLQFFIGERMAEGQGEGQVAVVEYRDEEEGEVPYLMLVKEALVE 178          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_SCHJA (Translationally-controlled tumor protein homolog OS=Schistosoma japonicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.382e-13
Identity = 50/170 (29.41%), Postives = 87/170 (51.18%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVD-IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKE 540
            M V++D ++GDE+ SDS    ++ N +++EV+  ++ V   +D   I ANPS               +V+D+V   RL    +FDKK +  Y+K ++K +  +L +E  E   IF+  I      +     D + ++GESM+ DG +    ++E    P F+++ D L E
Sbjct:    1 MRVFKDAISGDEMFSDSHS-PQLINDVVYEVDANFITVSNGLDSKLIAANPSGEEGQEEVSDSTE--RVIDLVHASRLVST-SFDKKSYRAYLKGYLKAIKERLQKENPERVSIFESRINEYMVNVFKNFDDYEHYIGESMNPDGMVALMNFRENGVTPYFVFLKDGLIE 166          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_XENLA (Translationally-controlled tumor protein homolog OS=Xenopus laevis GN=tpt1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.306e-13
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVV--QGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADAL 534
            M++Y+D +T DE+ SD +   E  +G+  EVEGK +   +GA+D  +    +                 VDIV   +LQE   F K  +  Y+K ++K L   L +   ER   F K  +   K +L    + QF+ GE M+ DG +    Y+E    P  ++  D L
Sbjct:    1 MIIYKDCITEDEMFSDIYKIIETPDGMCLEVEGKVIQREEGAIDDALIGGNASAEFQEDDVGGSSLTSGVDIVMNHKLQET-GFTKDSYKNYIKDYVKQLKAHLEKTNPERVNTFMKGAQETVKKILGNFKNYQFYTGERMNPDGMVGLLDYREDGITPFMIFFKDGL 167          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_BRUMA (Translationally-controlled tumor protein homolog OS=Brugia malayi PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.050e-13
Identity = 59/179 (32.96%), Postives = 88/179 (49.16%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESMHD---DGCLVFAYYK--ERATDPTFLYMADALKE 540
            ML+++D  T DEL SDSFP K ++ G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I      LLSK     LQFF+GE M +   +G +    Y+  E    P  + + +AL E
Sbjct:    1 MLIFKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSAEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLVTFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIPAWVVSLLSKDRFKQLQFFIGERMAEGQGEGQVAVVEYRDEEDGEVPYLMLVKEALIE 178          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: FKSG2_HUMAN (Putative apoptosis inhibitor FKSG2 OS=Homo sapiens GN=FKSG2 PE=5 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.544e-12
Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEG---ATKFLLSKLSDLQFFVGESMHDDGCL-VFAYYKERATDPTFLYMADALKEVTC 549
            M+++QDL++ +E+ SD +   EI NG+  EVE K + +   + D   IG N S                 VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E  K  I G     K + +   + QFF+GE+++  G + +  Y K+   DP + ++ + L+   C
Sbjct:    1 MIIFQDLISHNEMFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITS-VDIVTNHHLQES-IFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGNEEQIKHIFANFQNYQFFIGENLNPPGMVALLNYRKDGQYDPIYDFLRNGLEIKRC 173          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_CAEEL (Translationally-controlled tumor protein homolog OS=Caenorhabditis elegans GN=tct-1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 5.866e-12
Identity = 54/182 (29.67%), Postives = 94/182 (51.65%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSEERQ-----EIFKKNIEGATKFLLSK--LSDLQFFVGESM---HDDGCLVFAYYK--ERATDPTFLYMADALKEVTC 549
            ML+Y+D+ T DEL SDSFP K +++ +++E +GK VV+   ++ + G+NPS               + +DIV   +L E   + D   F  Y+K+F+K +   + +  +     + FKK I+G    LL+K    +L FF+GE      ++G +    Y+  +    PT + + +A+ E  C
Sbjct:    1 MLIYKDIFTDDELSSDSFPMKLVDD-LVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEKC 181          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_TRIPS (Translationally-controlled tumor protein homolog OS=Trichinella pseudospiralis PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.001e-11
Identity = 56/159 (35.22%), Postives = 83/159 (52.20%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESMH-DDGCLVFAYYKE 492
            M++Y+DL +GDEL SD+FP K + N +++E  GK VV+   +V + GANPS                 +DIV   +L E P + D K F  ++K ++K L  K+     SEE    FKKN++     LL K    +LQFF G   +  +G L    Y++
Sbjct:    1 MIIYRDLFSGDELCSDTFPMK-LVNDVVFEFTGKHVVRKLGEVTLEGANPSAEEFDEGTEEQMESG--IDIVLNHQLMEMPMYQDIKIFKDWIKEYMKKLVEKMKSDGESEESISKFKKNMQEYVTSLLKKDRFKELQFFSGPGENAAEGQLAIVEYRQ 156          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_CAEBR (Translationally-controlled tumor protein homolog OS=Caenorhabditis briggsae GN=tct-1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.001e-11
Identity = 53/182 (29.12%), Postives = 93/182 (51.10%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSEERQ-----EIFKKNIEGATKFLLSK--LSDLQFFVGESM---HDDGCLVFAYYK--ERATDPTFLYMADALKEVTC 549
            ML+Y+D+ T DEL SDSFP K +++ +++E +G+ VV+   D+ + G+NPS               + +DIV   +L E   + D   F  Y+K+F+K +   + +  +     + FKK I+     LL+K    +L FF+GE      ++G +    Y+  +    PT + + +A+ E  C
Sbjct:    1 MLIYKDIFTDDELSSDSFPMKLVDD-LIYEFKGRHVVRKEGDIILAGSNPSAEEGAEDEGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNIIDHMEKNNRDKADVDAFKKKIQAWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAILEEKC 181          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_ASPFU (Translationally-controlled tumor protein homolog OS=Aspergillus fumigatus GN=AFUA_1G16840 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.001e-11
Identity = 52/178 (29.21%), Postives = 87/178 (48.88%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVE-GKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRL-----QEQPAFDKKPFVTYMKRFIKLLTPKLSEE-----RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEV 543
            M++Y+D+++GDE+LSD+F  KE++ G+L+E +  K++ +   D+ + GANPS                V DI D FRL     +E     K  F +++K ++K +  KL E+       + FKK    A K +L+   +    +G SM  D   V   ++E    P        L+E+
Sbjct:    1 MIIYKDIISGDEVLSDNFKIKEVD-GVLYECDCRKYLKRKNEDIQLEGANPSAEEGDDDAGGDGEEVMVHDIEDQFRLVWLKTEEGMKPSKDAFKSHLKTYMKKVLAKLQEKGVPEAEIDAFKKGAPAAVKKILANYDNYDVLMGHSMDGDAMHVLIDFREDGVTPYATLWKHGLEEM 177          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_IXOSC (Translationally-controlled tumor protein homolog OS=Ixodes scapularis GN=Tctp PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.911e-11
Identity = 53/174 (30.46%), Postives = 86/174 (49.43%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKN-----IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY---KERATDPTFLYMADALKE 540
            ML+++D+LTGDE+ +DS  YK +++ I +E+E + V +   +V + GANPS                 +D+V   RL E   F K  +  Y+K + K L  K  E+ +   + N     +  A K +L ++ D+QFF+GES + DG +    Y   K     P  ++    L E
Sbjct:    1 MLLFKDILTGDEMFTDSVKYKLVDDCI-FEIECEHVTRKVGEVALDGANPSAEEVEEGTEEGTESG--LDLVLNMRLVET-GFSKTDYKNYLKTYTKALMDKWKEDGKSEAEVNEAKSKLTEAVKKVLPRIGDMQFFLGESSNPDGIVALLEYRPNKSGGETPVVMFFKHGLLE 170          
The following BLAST results are available for this feature:
BLAST of DY259796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
TCTP_WUCBA1.396e-1332.96Translationally-controlled tumor protein homolog O... [more]
TCTP_SCHJA2.382e-1329.41Translationally-controlled tumor protein homolog O... [more]
TCTP_XENLA5.306e-1329.76Translationally-controlled tumor protein homolog O... [more]
TCTP_BRUMA9.050e-1332.96Translationally-controlled tumor protein homolog O... [more]
FKSG2_HUMAN1.544e-1230.29Putative apoptosis inhibitor FKSG2 OS=Homo sapiens... [more]
TCTP_CAEEL5.866e-1229.67Translationally-controlled tumor protein homolog O... [more]
TCTP_TRIPS1.001e-1135.22Translationally-controlled tumor protein homolog O... [more]
TCTP_CAEBR1.001e-1129.12Translationally-controlled tumor protein homolog O... [more]
TCTP_ASPFU1.001e-1129.21Translationally-controlled tumor protein homolog O... [more]
TCTP_IXOSC2.911e-1130.46Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259796 ID=DY259796; Name=DY259796; organism=Citrus clementina; type=EST; length=1184bp
CGTTGATTGTTTTTCTTTTTTGTGTTCGCGAGAGAGACTGCAATCATGTT
GGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCTCCGATTCTTTTC
CCTACAAGGAAATTGAGAATGGGATTCTGTGGGAAGTTGAGGGAAAGTGG
GTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAATCCTTCTGCCGA
AGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGTGAAGGTGGTCG
ACATTGTCGACACATTCAGGCTACAGGAGCAACCCGCTTTTGACAAGAAG
CCGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTGACGCCCAAGCT
GAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAGGGAGCGACCA
AGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGTTGGGGAGAGC
ATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAAGGAACGTGCGAC
CGACCCAACATTTTTGTATATGGCTGATGCATTGAAGGAGGTGACGTGCT
AAGCTGCGGCTTCGAAAACGAAGTGCCTGGCTGATATTCCAATTTTAATT
TATCGCCCCGGTCTATTTCACGCACCTATTGCGGCGGTTTACTCCAAAAC
CAGTCCCTGCCCATTTTCACGATATAATTCGAAACCACAAATAACGTAAT
AGTTCCTCCCCATATCCTTTATTACACAACACATGCCTTCACTCGGTTGC
CCCCGCCGTTCGCCTAACCCAATCTCCTCGTTTTTTTTATTTTCCATAGA
CTGTAAATCATCCCTCTTCCCGCCAAACCTCCATACCTGCCTCGCCCCCC
CATCGCCTGAAGTTGCGTTTTCTTCATGTGCCCTTCACCTGGAATCATAT
CTATAGGAACCTTCTACAGCCTTCCCCAGTCCTCGGCACCCGTTCCCTCT
GTCCACCCGCCCCCTATATAACACAATCAACAAGAATATACTTATTGCTA
CTCCCTTTATGTATCATTCTTATATTGTCTTCCATTTTTCCTCTCTCCTT
AATGTTTATTTTATTGTTTTTTTTGTCCTTATTAGATGTTTTGGTTTTTA
CAGTCGACTATGTTCAACCCTTCACGTGTTTTTTGATCTTTCGGTAATGA
CCTATGAGGCTGTCCGTCTCGTCCCGCCCCTGCT
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