DY259808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_SHESR (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain MR-7) GN=glgC PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.203e-22 Identity = 86/287 (29.97%), Postives = 133/287 (46.34%), Query Frame = 1 Query: 1 LQKHIDTKADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIV--GVRLPLESGVEFSDTMMKVANYYQMNPKFLPTCGRKVPLVLEQIKNKNCLLDKKPKLEKGALA-------KSKGFQ 783 L H ++ AD+TVSC+ + + A+ +G+M++D +I+ F EKPK P + L ASMG Y+F T+ L + L+ +N DFG +IIP+ ++ H V A+ F YW D+GT+ SF+ AN+ L YD K P +T LPP K R VD+IIS GC + +V+ S++ VR+ S VE S + V +VL K KN ++D+ + +G + ++KGF+ Sbjct: 146 LAAHAESGADMTVSCLEVPVAEAAGAFGVMEVDDEMRILGFEEKPKHPKHSPGNPEKCL--------------ASMGNYVFNTEFLFDQLKKDAQNANSDRDFGKDIIPSIIEKHKVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTYQEQLPPAKFVFDDDDRRGMAVDSIISGGCIISGATVRRSVLFNEVRVCSYSVVEDSVVLPDV-------------------VVLRHCKIKNAIIDRGCIIPEGTVIGYNHDHDRAKGFR 399
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_SHESM (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain MR-4) GN=glgC PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.203e-22 Identity = 86/287 (29.97%), Postives = 133/287 (46.34%), Query Frame = 1 Query: 1 LQKHIDTKADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIV--GVRLPLESGVEFSDTMMKVANYYQMNPKFLPTCGRKVPLVLEQIKNKNCLLDKKPKLEKGALA-------KSKGFQ 783 L H ++ AD+TVSC+ + + A+ +G+M++D +I+ F EKPK P + L ASMG Y+F T+ L + L+ +N DFG +IIP+ ++ H V A+ F YW D+GT+ SF+ AN+ L YD K P +T LPP K R VD+IIS GC + +V+ S++ VR+ S VE S + V +VL K KN ++D+ + +G + ++KGF+ Sbjct: 146 LAAHAESGADMTVSCLEVPVAEAAGAFGVMEVDDEMRILGFEEKPKHPKHSPGNPEKCL--------------ASMGNYVFNTEFLFDQLKKDAQNANSDRDFGKDIIPSIIEKHKVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTYQEQLPPAKFVFDDDDRRGMAVDSIISGGCIISGATVRRSVLFNEVRVCSYSVVEDSVVLPDV-------------------VVLRHCKIKNAIIDRGCIIPEGTVIGYNHDHDRAKGFR 399
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB8 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS185) GN=glgC PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.203e-22 Identity = 87/288 (30.21%), Postives = 134/288 (46.53%), Query Frame = 1 Query: 1 LQKHIDTKADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIV--GVRLPLESGVEFSDTMMKVANYYQMNPKFLPTCGRKVPLVLEQIKNKNCLLDKKPKLEKGALA-------KSKGFQ 783 L H ++ AD+TVSC VP+ ++ A +G+M++D +I+ F EKP+ P + L ASMG Y+F T+ L + L+ + DFG +IIPA ++ HNV A+ F YW D+GT+ SF+ AN+ L YD K P +T LPP K R +D+I+S GC + +V+ S++ VR+ S VE S + V +VL K KN +LD+ + +G + ++KGF+ Sbjct: 146 LAAHAESGADMTVSCLEVPIAEA-AGSFGVMEVDEEMRILGFEEKPQQPKHSPGNPEMCL--------------ASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPDV-------------------VVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFR 399
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB2 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS223) GN=glgC PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.203e-22 Identity = 87/288 (30.21%), Postives = 134/288 (46.53%), Query Frame = 1 Query: 1 LQKHIDTKADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIV--GVRLPLESGVEFSDTMMKVANYYQMNPKFLPTCGRKVPLVLEQIKNKNCLLDKKPKLEKGALA-------KSKGFQ 783 L H ++ AD+TVSC VP+ ++ A +G+M++D +I+ F EKP+ P + L ASMG Y+F T+ L + L+ + DFG +IIPA ++ HNV A+ F YW D+GT+ SF+ AN+ L YD K P +T LPP K R +D+I+S GC + +V+ S++ VR+ S VE S + V +VL K KN +LD+ + +G + ++KGF+ Sbjct: 146 LAAHAESGADMTVSCLEVPIAEA-AGSFGVMEVDEEMRILGFEEKPQQPKHSPGNPEMCL--------------ASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPDV-------------------VVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFR 399
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_SHESA (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain ANA-3) GN=glgC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.877e-22 Identity = 86/287 (29.97%), Postives = 132/287 (45.99%), Query Frame = 1 Query: 1 LQKHIDTKADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIV--GVRLPLESGVEFSDTMMKVANYYQMNPKFLPTCGRKVPLVLEQIKNKNCLLDKKPKLEKGALA-------KSKGFQ 783 L H ++ AD+TVSC+ + + A+ +G+M++D +I+ F EKPK P + L ASMG Y+F T+ L L+ +N DFG +IIP+ ++ H V A+ F YW D+GT+ SF+ AN+ L YD K P +T LPP K R VD+IIS GC + +V+ S++ VR+ S VE S + V +VL K KN ++D+ + +G + ++KGF+ Sbjct: 146 LAAHAESGADMTVSCLEVPVAEAAGAFGVMEVDDEMRILGFEEKPKHPKHSPGNPEKCL--------------ASMGNYVFNTEFLFEQLKKDAQNANSDRDFGKDIIPSIIEKHKVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTYQEQLPPAKFVFDDDDRRGMAVDSIISGGCIISGATVRRSVLFNEVRVCSYSVVEDSVVLPDV-------------------VVLRHCKIKNAIIDRGCIIPEGTVIGYNHDHDRAKGFR 399
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_SHEFN (Glucose-1-phosphate adenylyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=glgC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.877e-22 Identity = 85/287 (29.62%), Postives = 138/287 (48.08%), Query Frame = 1 Query: 1 LQKHIDTKADITVSCV--PMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIVGVRLPLESGVEFSDTMMKVANY-YQMNPKFLPTCGRKVPLVLEQIKNKNCLLDKKPKLEKGALA-------KSKGFQ 783 L H ++ A++TV C+ P+D++ A +G+M++D ++I F EKP P K + D T+ +ASMG Y+F T L L+ ++ DFG +IIPA +++H V AF F+ YW D+GT+ SFF AN+ L YD K P +T LPP K R VD+I+S GC + V+ ++ F + ++V +Y + + LP +VL+ K +N +LD+ + +G + ++KGF+ Sbjct: 146 LAAHAESGAEMTVCCLETPIDEA-AGAFGVMEVDSEHRVIGFEEKPAEP--KSIPSDPTMC------------LASMGNYVFNTKFLFEQLKKDANNEKSDRDFGKDIIPAIIENHKVFAFPFSSAVAGQPSYWRDVGTLDSFFQANMELLLPTPPLNLYDAKWPIWTYQEQLPPAKFVFDDDDRRGMAVDSIVSGGCIISGAKVKRCVL-----------FDE--VRVCSYSFVKDSVLLPDV-----VVLKNCKIQNAILDRGCIIPEGMVIGYNHDHDRAKGFR 399
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_BRAJA (Glucose-1-phosphate adenylyltransferase OS=Bradyrhizobium japonicum GN=glgC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.877e-22 Identity = 70/225 (31.11%), Postives = 116/225 (51.56%), Query Frame = 1 Query: 1 LQKHIDTKADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR--SSYPLSN-DFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIV--GVRLPLESGVE 609 L++H+D+ AD+TV C+ M + +S +G+M ID +G I +F EKP P + D +L ASMG+Y+F L + L+ + P SN DFG +IIP VK+ A F+ YW D+GT+ +++ AN+ LT+ + + +D P ++ + PP K R + V +++S GC + S++ S++ GVR+ + VE Sbjct: 146 LRQHVDSGADVTVGCLEMPRAESSGFGIMHIDENGWIQEFLEKPADPPPMPGKPDVSL--------------ASMGIYVFDAKFLFDQLKRDAEDPSSNHDFGKDIIPYIVKNGRAIAHQFSTSCVRSGDDPRAYWRDVGTVDAYWAANIDLTDVVPELDLFDRAWPIWSYSEITPPAKFVHDEESRRGQAVSSLVSGGCIISGASLRRSLLFTGVRINSYANVE 356
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB9 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS195) GN=glgC PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.908e-22 Identity = 87/288 (30.21%), Postives = 133/288 (46.18%), Query Frame = 1 Query: 1 LQKHIDTKADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIV--GVRLPLESGVEFSDTMMKVANYYQMNPKFLPTCGRKVPLVLEQIKNKNCLLDKKPKLEKGALA-------KSKGFQ 783 L H ++ AD+TVSC VP+ ++ A +G+M++D +I+ F EKP P + L ASMG Y+F T+ L + L+ + DFG +IIPA ++ HNV A+ F YW D+GT+ SF+ AN+ L YD K P +T LPP K R +D+I+S GC + +V+ S++ VR+ S VE S + V +VL K KN +LD+ + +G + ++KGF+ Sbjct: 146 LAAHAESGADMTVSCLEVPIAEA-AGSFGVMEVDEEMRILGFEEKPLQPKHSPGNPEMCL--------------ASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPDV-------------------VVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFR 399
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_RHIEC (Glucose-1-phosphate adenylyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgC PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.908e-22 Identity = 68/217 (31.34%), Postives = 104/217 (47.93%), Query Frame = 1 Query: 1 LQKHIDTKADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIV--GVR 585 LQ+H+D+ AD+T+ C+ + A+ +G+M ++ +I F EKP P +PD F +ASMG+Y+F T LL+ LR + S DFG +IIP VK+ A F YW D+GTI +++ AN+ LT + + YD P +T A PP K R +++S C + S+ S++ GVR Sbjct: 146 LQQHVDSGADVTIGCLEVPRMEATGFGVMHVNEKDEIFAFIEKPADPP-------------GIPDKPDFA-LASMGIYVFHTKFLLDALRRDAADPTSSRDFGKDIIPYIVKNGKAVAHRFAKSCVRSDFEHEPYWRDVGTIDAYWQANIDLTAIVPELDIYDKSWPIWTYAEITPPAKFVHDDDDRRGSATSSVVSGDCIISGASLNKSLLFTGVR 348
BLAST of DY259808 vs. ExPASy Swiss-Prot
Match: GLGC_RHILW (Glucose-1-phosphate adenylyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=glgC PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 6.409e-22 Identity = 69/217 (31.80%), Postives = 104/217 (47.93%), Query Frame = 1 Query: 1 LQKHIDTKADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPKTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQLSIV--GVR 585 LQ+H+D+ AD+T+ C+ + A +G+M ++ +II F EKP P +PD F +ASMG+Y+F T LL+ LR + S DFG +IIP VK+ A F YW D+GTI +++ AN+ LT + + YD P +T A PP K R +++S C + S+ S++ GVR Sbjct: 146 LQQHVDSGADVTIGCLEVPRMEAVGFGVMHVNEKDEIIAFVEKPADPP-------------PIPDKPDFA-LASMGIYVFHTKFLLDALRRDAADPNSSRDFGKDIIPYIVKNGKAVAHRFAKSCVRSDFEHEPYWRDVGTIDAYWQANIDLTAIVPELDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSATSSVVSGDCIISGASLNNSLLFTGVR 348 The following BLAST results are available for this feature:
BLAST of DY259808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 309
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259808 ID=DY259808; Name=DY259808; organism=Citrus clementina; type=EST; length=995bpback to top |