DY259814

Overview
NameDY259814
Unique NameDY259814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1084
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: IF2G_THEON (Translation initiation factor 2 subunit gamma OS=Thermococcus onnurineus (strain NA1) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.730e-33
Identity = 75/176 (42.61%), Postives = 108/176 (61.36%), Query Frame = 2
Query:  251 RQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPTTSEHLAAVEIMRLQHIKILQNKVDLIQENVAINQNEANLKFTR 778
            RQA +NIG +GHV HGK+T+ KA++G+ T     EL R ITIK+G+A+A+I KC       P C +        +P+C   G E    +  R VSF+D PGH+ LM TML GA++MDGA+L+IAANE    P T EHL A++I+  ++I I  NK++L+     I + +   +F +
Sbjct:    8 RQAEVNIGMVGHVDHGKTTLTKALTGIWTDTHSEELRRGITIKIGFADAEIRKC-------PSCGR-----YSTSPICPYCGHET---EFERRVSFIDAPGHEALMTTMLAGASLMDGAVLVIAANEGV-MPQTREHLMALQIVGNKNIVIALNKIELVDREKVIERYQEIKEFVK 167          

HSP 2 Score: 26.5646 bits (57), Expect = 5.730e-33
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  766 EVYQGTVADGAPVVPIS 816
            E  +GTVA+ AP++PIS
Sbjct:  164 EFVKGTVAENAPIIPIS 180          

HSP 3 Score: 22.3274 bits (46), Expect = 5.730e-33
Identity = 12/30 (40.00%), Postives = 16/30 (53.33%), Query Frame = 3
Query:  831 NIDVGCKYIVKKNPIPKKDFY*PPKMFEIR 920
            N+DV    I +  P P+ D   PPKM  +R
Sbjct:  186 NVDVLLAAIEEFIPTPEHDPNKPPKMLVLR 215          
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: IF2G_HALWD (Translation initiation factor 2 subunit gamma OS=Haloquadratum walsbyi (strain DSM 16790) GN=eIF2G PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.034e-33
Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 2
Query:  248 SRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPTTSEHLAAVEIMRLQHIKILQNKVDLIQENVAINQN 754
            ++Q  +NIG +GHV HGK+T+V+A+SG  T +   E++R I+I+LGYA+A      +   P    Y    +G +  P            + LR VSFVD PGH+ LMATML+GAAIMDGA+L+++A E  PQ  T EHL A++I+ ++++ I QNK+DL+    AI  +
Sbjct:    5 TQQPEVNIGLVGHVDHGKTTLVQALSGSWTDQHSEEMKRGISIRLGYADATFRMISNINPPEG--YTVDETGPDGEPT-----------ETLRTVSFVDAPGHETLMATMLSGAAIMDGAVLVVSATEDVPQAQTEEHLMALDIIGIENVVIAQNKIDLVDRERAIESH 160          

HSP 2 Score: 28.4906 bits (62), Expect = 6.034e-33
Identity = 16/39 (41.03%), Postives = 27/39 (69.23%), Query Frame = 1
Query:  775 QGTVADGAPVVPISGH--LNKILMLDANIL*KKIPFQKR 885
            +GTVA+ AP+VP+S    +N  L++DA  + ++IP  +R
Sbjct:  168 EGTVAEDAPIVPVSAQQAVNIDLLIDA--IEREIPTPER 204          
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: SUV39_DROME (Histone-lysine N-methyltransferase Su(var)3-9 OS=Drosophila melanogaster GN=Su(var)3-9 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 7.482e-27
Identity = 64/78 (82.05%), Postives = 68/78 (87.18%), Query Frame = 2
Query:  176 KGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYK 409
            + L +QDLS LDV+KL PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKL   + K  K
Sbjct:   12 RNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLERLSEKKIK 89          
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: SUV39_DROPS (Histone-lysine N-methyltransferase Su(var)3-9 OS=Drosophila pseudoobscura pseudoobscura GN=Su(var)3-9 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.144e-25
Identity = 61/78 (78.21%), Postives = 66/78 (84.62%), Query Frame = 2
Query:  176 KGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYK 409
            + L +QDL  L+V+ L PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKL   + K  K
Sbjct:   12 RNLQKQDLRNLEVSNLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLERLSEKKIK 89          
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: EFTU_TOXGO (Elongation factor Tu, apicoplast OS=Toxoplasma gondii GN=tufA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.550e-16
Identity = 65/190 (34.21%), Postives = 93/190 (48.95%), Query Frame = 2
Query:  230 LSPEVISRQAT-INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYK---CEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPTTSEHLAAVEIMRLQHIKILQNKVDLIQENVAINQNEANLKFTRELL 787
            ++ E+  +Q   INIGTIGHV HGK+T+  AI+ V        L +N   KL     K YK   C  +   R +  K      E                 +RH + +DCPGH   +  M+ GAA MDGA+L+++A +  P P T EHL   + + + +I +  NK+DLI +N  +   E     TRELL
Sbjct:    1 MAKEIFKKQKPHINIGTIGHVDHGKTTLTAAITYV--------LAKNNQAKL-----KTYKEIDCAPEEIARGITIKTSHIEYET---------------AVRHYAHIDCPGHADYIKNMITGAAQMDGAILVVSAVDG-PMPQTKEHLLLAKQIGISNIIVFLNKIDLIDDNEILELVELE---TRELL 158          
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: SELB_MOOTH (Selenocysteine-specific elongation factor OS=Moorella thermoacetica GN=selB PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 8.581e-15
Identity = 53/156 (33.97%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  263 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPTTSEHLAAVEIMRLQHIKILQNKVDLIQ 730
            I +GT GHV HGK+ +VKA++GV T R K E ER I+I+LG+A                            PL    G         R +  VD PGH+  +  ML G   MD  +L++AA+E    P T EHLA +++++++   I+  K+DL++
Sbjct:    4 IVVGTAGHVDHGKTVLVKALTGVDTDRLKEEKERGISIELGFA----------------------------PLTLPSG---------RQLGLVDVPGHERFIRQMLAGVGGMDLVMLVVAADEGV-MPQTREHLAIIDLLQIKKGIIVITKIDLVE 121          
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: EFTU_AQUPY (Elongation factor Tu OS=Aquifex pyrophilus GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.261e-14
Identity = 57/176 (32.39%), Postives = 84/176 (47.73%), Query Frame = 2
Query:  263 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCED-DRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPTTSEHLAAVEIMRLQHIKILQNKVDLIQENVAINQNEANLKFTRELL 787
            +N+GTIGHV HGKST+  AI+ V                     AK +K E+ D+ P           KE     ++   E    K  RH + VDCPGH   +  M+ GAA MDGA+L+++A +  P P T EH+     + + +I +  NK D++ +   +   E  +   RELL
Sbjct:   13 VNVGTIGHVDHGKSTLTSAITCVLAAGLVEG-----------GKAKCFKYEEIDKAPEE---------KERGITINITHVEYETAK--RHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADG-PMPQTREHVLLARQVNVPYIVVFMNKCDMVDDEELLELVELEV---RELL 162          
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: EFTU_AQUAE (Elongation factor Tu OS=Aquifex aeolicus GN=tufA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.261e-14
Identity = 57/176 (32.39%), Postives = 84/176 (47.73%), Query Frame = 2
Query:  263 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCED-DRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPTTSEHLAAVEIMRLQHIKILQNKVDLIQENVAINQNEANLKFTRELL 787
            +N+GTIGHV HGKST+  AI+ V                     AK +K E+ D+ P           KE     ++   E    K  RH + VDCPGH   +  M+ GAA MDGA+L+++A +  P P T EH+     + + +I +  NK D++ +   +   E  +   RELL
Sbjct:   13 VNVGTIGHVDHGKSTLTSAITCVLAAGLVEG-----------GKAKCFKYEEIDKAPEE---------KERGITINITHVEYETAK--RHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADG-PMPQTREHVLLARQVNVPYIVVFMNKCDMVDDEELLELVELEV---RELL 162          
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: EFTU_FLAFE (Elongation factor Tu OS=Flavobacterium ferrugineum GN=tuf PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.258e-14
Identity = 57/169 (33.73%), Postives = 81/169 (47.93%), Query Frame = 2
Query:  263 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPTTSEHLAAVEIMRLQHIKILQNKVDLIQENVAINQNEANLK 769
            +NIGTIGHV HGK+T+  AI+             +I  K G A AK Y  E D  P           KE     +    E       RH + VDCPGH   +  M+ GAA MDGA+L++AA++  P P T EH+     + +  + +  NKVDL+ +   +   E  ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAIT-------------DILSKKGLAQAKKYD-EIDGAPEE---------KERGITINTAHVEYETAN--RHYAHVDCPGHADYVKNMITGAAQMDGAILVVAASDG-PMPQTKEHILLAAQVGVPKMVVFLNKVDLVDDEELLELVEIEVR 155          
BLAST of DY259814 vs. ExPASy Swiss-Prot
Match: EFTU_MYCHJ (Elongation factor Tu OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.264e-14
Identity = 55/156 (35.26%), Postives = 75/156 (48.08%), Query Frame = 2
Query:  263 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDNPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPTTSEHLAAVEIMRLQHIKILQNKVDLIQ 730
            INIGTIGHV HGK+T+  AIS              +  K G A AK Y   D          A    K      +    E    K  RH + VDCPGH   +  M+ GAA MDGA+L++AA +  P P T EH+   + + +  + +  NK+DL++
Sbjct:   19 INIGTIGHVDHGKTTLTAAIS-------------TVLAKRGLAEAKDYASID----------AAPEEKARGITINTAHIEYSTDK--RHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG-PMPQTREHILLSKQVGVPKMVVFLNKIDLLE 148          
The following BLAST results are available for this feature:
BLAST of DY259814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
IF2G_THEON5.730e-3342.61Translation initiation factor 2 subunit gamma OS=T... [more]
IF2G_HALWD6.034e-3342.60Translation initiation factor 2 subunit gamma OS=H... [more]
SUV39_DROME7.482e-2782.05Histone-lysine N-methyltransferase Su(var)3-9 OS=D... [more]
SUV39_DROPS3.144e-2578.21Histone-lysine N-methyltransferase Su(var)3-9 OS=D... [more]
EFTU_TOXGO4.550e-1634.21Elongation factor Tu, apicoplast OS=Toxoplasma gon... [more]
SELB_MOOTH8.581e-1533.97Selenocysteine-specific elongation factor OS=Moore... [more]
EFTU_AQUPY3.261e-1432.39Elongation factor Tu OS=Aquifex pyrophilus GN=tuf ... [more]
EFTU_AQUAE3.261e-1432.39Elongation factor Tu OS=Aquifex aeolicus GN=tufA P... [more]
EFTU_FLAFE4.258e-1433.73Elongation factor Tu OS=Flavobacterium ferrugineum... [more]
EFTU_MYCHJ7.264e-1435.26Elongation factor Tu OS=Mycoplasma hyopneumoniae (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259814 ID=DY259814; Name=DY259814; organism=Citrus clementina; type=EST; length=1084bp
CACACCCTCTCACCATCAATATAGCGGTAAACCTCAGTCAAATCTCGGTC
TCGCAGTCGTTCTCCGGTCGCAACTTGCTCTGCATTCAATCAGTTTTACG
GGCTTGAACATTACTAGTGGCAATACAGACAATAAGGAGAGGGGTATTTT
CAAAGAAACAGGCAAGATGTCACGGAAGGGTTTGATGGAACAGGACTTGA
GTAAGTTGGATGTAACTAAGTTGCATCCTCTTTCTCCTGAAGTCATTTCT
CGCCAGGCTACTATTAATATTGGAACTATCGGTCATGTGGCCCATGGCAA
ATCAACTGTTGTGAAGGCAATATCTGGTGTTCAGACTGTTCGTTTTAAGA
ATGAATTAGAGCGTAACATTACTATCAAGCTTGGATATGCAAATGCCAAG
ATATACAAATGTGAAGATGATCGTTGCCCACGACCAATGTGCTATAAGGC
ATATGGAAGTGGGAAAGAAGATAATCCTCTGTGCGATGTGCCTGGTTTTG
AGAACTGCAGGATGAAATTGCTTAGGCATGTCTCTTTTGTTGATTGCCCG
GGTCATGATATTCTTATGGCTACAATGCTTAATGGAGCAGCAATTATGGA
TGGAGCATTGCTTCTCATAGCAGCCAATGAAAGTTGCCCGCAACCAACAA
CATCGGAGCACTTGGCAGCTGTTGAAATCATGCGTCTCCAACATATAAAA
ATTCTTCAAAATAAAGTTGATCTCATTCAAGAAAATGTGGCCATCAACCA
AAATGAAGCTAATCTGAAGTTTACCAGGGAACTGTTGCTGATGGCGCACC
AGTGGTTCCCATTTCTGGCCACCTAAATAAAATATTGATGTTGGATGCAA
ATATATTGTGAAAAAAAATCCCATTCCAAAAAAGGACTTTTATTGACCAC
CAAAAATGTTTGAAATTCGACTTTTGAAGTCAAAAACCCTGGGTTTGGAA
GTTGATGAATAAAAAGGGGGTGTTGGGGGGGGGCAACCTCTCGGAAGGGG
GGTTCCAAAGGGGAAAACAATTTTTTAGAGGGGGTCCTCCTCGGATTTGG
ATGGTTAAAAAAAGATCCAGGAAAAAATAAAATG
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