DY259817

Overview
NameDY259817
Unique NameDY259817
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1060
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_XANC5 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=cysI PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 4.543e-21
Identity = 58/177 (32.77%), Postives = 93/177 (52.54%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAK-------SYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            IK +S  +R  L + L       + E    LIK+HGSYQQ +RD R  +       +Y FM+RT+ P G ++   +L +D +A ++               HGV+K++LK  M++I  ++  TL ACGD+NRNV     PL+ + +      A  ++  L P +  YYE+W+D E++
Sbjct:    8 IKSESRRLRGSLQQSLADAVTGALREDDQTLIKYHGSYQQDDRDIRDERRRQKLEPAYQFMIRTRTPGGVITPTQWLALDGIATRYANHSLRVTTRQAFQFHGVIKRELKATMQAINATLIDTLAACGDVNRNVQVAANPLLSQAHATLYADAARVSEHLLPNTRAYYEIWLDEERV 184          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_XANCP (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas campestris pv. campestris GN=cysI PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.749e-21
Identity = 59/177 (33.33%), Postives = 91/177 (51.41%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAK-------SYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            IK  S  +R  L + L       + E    LIK+HGSYQQ +RD R  +       +Y FM+RT+ P G +S   +L +D +A ++               HGV+K++LK  M++I  ++  TL ACGD+NRNV     PL  + +      A  ++  L P +  YYE+W+D E++
Sbjct:    8 IKSTSRRLRGSLEQSLADPVTGALREDDQTLIKYHGSYQQDDRDIRDERRRQKLEPAYQFMIRTRTPGGVISPSQWLALDGIATRYANHSLRITTRQAFQFHGVIKRELKATMQAINATLIDTLAACGDVNRNVQVAANPLRSQAHATLYADAARVSEHLLPNTRAYYEIWLDEERV 184          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_BACSU (Sulfite reductase [NADPH] hemoprotein beta-component OS=Bacillus subtilis GN=cysI PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.322e-20
Identity = 55/177 (31.07%), Postives = 100/177 (56.50%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTD-APNVNESATQLIKFHGSYQQYNRDERGAK-------SYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            IK++S+++R  L E +L   +  + +   +L+K HGSY Q +RD R  +       +Y FMLR + P G  + + +L MDDL+ ++G G            HG+LK ++K  +++I  ++  T+ ACGD+NRNV+    P   + +    + +K ++  L P++  Y+E+W+D E++
Sbjct:   19 IKKESDYLRGTLKEVMLDRISAGIPDDDNRLMKHHGSYLQDDRDLRNERQKQKLEPAYQFMLRVRMPGGVSTPEQWLVMDDLSQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSALLDTIAACGDVNRNVMCASNPYQSEIHSEVYEWSKKLSDDLLPRTRAYHEIWLDEERV 195          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_LYSSC (Sulfite reductase [NADPH] hemoprotein beta-component OS=Lysinibacillus sphaericus (strain C3-41) GN=cysI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.023e-20
Identity = 58/182 (31.87%), Postives = 97/182 (53.30%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTD--APNVNESATQLIKFHGSYQQYNRDERGAK-------SYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*DGE 781
            IK +SN++R  L E  + D  +  + E   +L+KFHGSY Q +RD R  +       +Y FM+R + P G  +   +L MD++A ++G G            HG+LK ++K  M+ I   +  +L ACGD+NRNV+    P     +      +  ++  L P++  Y+E+W+DGE++ D +
Sbjct:   20 IKTESNYLRGTL-ERTMNDPLSSGIPEDDNRLMKFHGSYLQDDRDLRNERQRQKLEPAYQFMVRVRTPGGAATPAQWLVMDEMARKYGNGSLKLTTRQAFQVHGILKWNVKKYMQEINEVLLDSLAACGDVNRNVMCNVNPNQSALHEEVYNWSAKLSEHLLPRTRAYHELWLDGEKVIDSQ 200          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_BACA2 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Bacillus amyloliquefaciens (strain FZB42) GN=cysI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.560e-20
Identity = 55/177 (31.07%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTD-APNVNESATQLIKFHGSYQQYNRDERGAK-------SYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            IKE+S+++R  L E +L   +  + +   +L+K HGSY Q +RD R  +       +Y FMLR + P G  + + +L MD+LA ++G              HG+LK ++K  ++ I  ++  T+ ACGD+NRNV+    P   + +    + +K ++  L P++  Y+E+W+D E++
Sbjct:   19 IKEKSDYLRGTLKEVMLDRISAGIPDDDNRLMKHHGSYLQDDRDLRNERQKQKLEPAYQFMLRVRMPGGVSTPEQWLVMDELAQKYGNNTLKLTTRETFQMHGILKWNMKKTIQKINAALLDTIAACGDVNRNVMCASNPHQSEIHAEVYEWSKKLSDDLLPRTRAYHEIWLDEERV 195          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_SHEPW (Sulfite reductase [NADPH] hemoprotein beta-component OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=cysI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.119e-19
Identity = 60/178 (33.71%), Postives = 93/178 (52.25%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPNV-NESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQF-GIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            +K  S+++R  + E L T      +E   QLIKFHG YQQ +RD R  +        YSFMLR +   G  S Q +L +DD+A                   HG+ K++LKT+++ + R    ++ ACGD+NRNV+  P P+  K +  A   AK ++  + P +  Y E+W+D E++
Sbjct:   12 LKTDSDYLRGTIQEGLDTAVTGAFSEGDQQLIKFHGFYQQDDRDLRNERKEQKLEPLYSFMLRARVAGGVCSPQQWLAVDDIASNLTSSNSIRLTTRQTFQYHGIPKRNLKTIIQDLDREALDSIAACGDVNRNVMCNPNPVESKLHQQAYAYAKQLSDNMLPHTKAYAEIWLDDEKL 189          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_CHRSD (Sulfite reductase [NADPH] hemoprotein beta-component OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=cysI PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.461e-19
Identity = 60/180 (33.33%), Postives = 99/180 (55.00%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*DG 778
            +K  S+++   L E L   A   V+++ TQL KFHG YQQ +RD R  +        YSFM+R + P G+VS + +LT+DD A ++  G            HGV K++L+  ++++ ++M  T+ ACGD+NRNV+    P     +      A  I+A L P++  Y+E+++  E++  G
Sbjct:   21 LKVDSHYLYGTLEESLADRATGAVSDADTQLTKFHGFYQQDDRDLRDDRRHRKLEPLYSFMVRLRLPGGRVSPEQWLTLDDNARRYANGTLRITTRQTFQYHGVFKENLRGHLQALDKAMMDTIAACGDVNRNVICTANPHRSPIHRQVHDLAHEISAHLLPRTRAYHEIFLGEERVAGG 200          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_SHESR (Sulfite reductase [NADPH] hemoprotein beta-component OS=Shewanella sp. (strain MR-7) GN=cysI PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.252e-19
Identity = 57/178 (32.02%), Postives = 96/178 (53.93%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAP-NVNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQF-GIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            +K  S+++R  + E L +    + ++   QLIKFHG YQQ +RD R  +        YSFMLR + P G  + + +L +D++A                   HG+ K++LKT+++ + R    ++ ACGD+NRNV+  P P+  K +  A + AK ++  L P +  Y E+W+D E++
Sbjct:   12 LKTDSDYLRGTIKEGLDSSVTGSFSDGDQQLIKFHGFYQQDDRDLRNERKEQKLEPLYSFMLRARVPGGVCTPKQWLGVDEIASTLTSSNSIRLTTRQTFQYHGIPKRNLKTIIQGLDREALDSIAACGDVNRNVMCNPNPVESKLHAQAYEVAKKLSDHLLPHTRAYAEIWLDEEKL 189          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_SHESM (Sulfite reductase [NADPH] hemoprotein beta-component OS=Shewanella sp. (strain MR-4) GN=cysI PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.252e-19
Identity = 57/178 (32.02%), Postives = 96/178 (53.93%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAP-NVNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQF-GIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            +K  S+++R  + E L +    + ++   QLIKFHG YQQ +RD R  +        YSFMLR + P G  + + +L +D++A                   HG+ K++LKT+++ + R    ++ ACGD+NRNV+  P P+  K +  A + AK ++  L P +  Y E+W+D E++
Sbjct:   12 LKTDSDYLRGTIKEGLDSSVTGSFSDGDQQLIKFHGFYQQDDRDLRNERKEQKLEPLYSFMLRARVPGGVCTPKQWLGVDEIASTLTSSNSIRLTTRQTFQYHGIPKRNLKTIIQGLDREALDSIAACGDVNRNVMCNPNPVESKLHAQAYEVAKKLSDHLLPHTRAYAEIWLDEEKL 189          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_SHESA (Sulfite reductase [NADPH] hemoprotein beta-component OS=Shewanella sp. (strain ANA-3) GN=cysI PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.252e-19
Identity = 57/178 (32.02%), Postives = 96/178 (53.93%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAP-NVNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQF-GIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            +K  S+++R  + E L +    + ++   QLIKFHG YQQ +RD R  +        YSFMLR + P G  + + +L +D++A                   HG+ K++LKT+++ + R    ++ ACGD+NRNV+  P P+  K +  A + AK ++  L P +  Y E+W+D E++
Sbjct:   12 LKTDSDYLRGTIKEGLDSSVTGSFSDGDQQLIKFHGFYQQDDRDLRNERKEQKLEPLYSFMLRARVPGGVCTPKQWLGVDEIASTLTSSNSIRLTTRQTFQYHGIPKRNLKTIIQGLDREALDSIAACGDVNRNVMCNPNPVESKLHAQAYEVAKKLSDHLLPHTRAYAEIWLDEEKL 189          
The following BLAST results are available for this feature:
BLAST of DY259817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
CYSI_XANC54.543e-2132.77Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_XANCP7.749e-2133.33Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BACSU1.322e-2031.07Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_LYSSC5.023e-2031.87Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BACA26.560e-2031.07Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SHEPW1.119e-1933.71Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_CHRSD1.461e-1933.33Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SHESR4.252e-1932.02Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SHESM4.252e-1932.02Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SHESA4.252e-1932.02Sulfite reductase [NADPH] hemoprotein beta-compone... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259817 ID=DY259817; Name=DY259817; organism=Citrus clementina; type=EST; length=1060bp
TTTGAAAACATTTGCTGTTGCGTTTGCGAGGGCTATGACGACGTCGTTTG
GAGCCGCCAACACCGTGATTCCGAACAATCCGAACATTCGGATTCGGAGC
TTTAACGGGTTGAAGCCTTCGCATTCGCTCTCTATCAGGACAAATCTGCG
CGCTTTTCCCGTTCCGTACGCCTCACGGAGTTCGGTCGTCAGAGCTGTGT
CCACGCCAGTAAAGCCGGAGACTGAGACCAAGACTGAGACTAAGCGAAGT
AAAGTGGAAATAATCAAAGAGCAAAGTAATTTCATAAGGTACCCTCTTAA
TGAGGAGTTGTTGACAGATGCCCCGAATGTAAATGAGTCTGCTACGCAGT
TAATAAAGTTTCATGGGAGCTACCAACAGTATAATAGAGATGAGCGTGGT
GCAAAATCGTACTCATTCATGCTTCGAACTAAGAATCCTTGCGGAAAAGT
CTCGAACCAACTGTACTTGACCATGGATGATCTTGCGGATCAGTTTGGTA
TCGGAACCCTTCGTCTGACTACCAGACAAACTTTTCAGCTCCATGGTGTC
TTGAAGAAGGACCTGAAGACAGTAATGAGAAGCATTATTAGAAGTATGGG
TTCAACTCTTGGTGCATGCGGTGATCTCAATAGGAATGTTCTTGCTCCTC
CTGCTCCTCTGGTGAGGAAAGATTACTTATTTGCACAGAAAACAGCAAAG
AACATTGCTGCTCCGCTCACGCCTCAGTCGGGTTTCTACTATGAAATGTG
GGTGGATGGGGAGCAAATTTAGGACGGCGAACCCCCCTGAAGTGGGTAAA
GGAACGTAATGAAAATTCTCATGGAAACCAATTTCCCCGGATTCTCCTGG
GCCCCTTTAAGGGGAATCCCTTCTTGGCCAAGGAAGTTTCAATTTTCGCT
AACCGGGGCCCAAAAAAAACCCCCGGGGGAAATTCTAACACAAAGAGAAT
ATGGGGGTGTCGGGGGTTCTCAAACAAACACGGGGGAACCCTCGGGAGAT
CCTCTCTTTTTTTGTGGGGGGGGGATAGGAGGAAAACTCTCTGGCTCTGG
CGCCACTCCC
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