DY259817

Overview
NameDY259817
Unique NameDY259817
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1060
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_PSYIN (Sulfite reductase [NADPH] hemoprotein beta-component OS=Psychromonas ingrahamii (strain 37) GN=cysI PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.672e-15
Identity = 57/183 (31.15%), Postives = 92/183 (50.27%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPNVN-ESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQF-GIGXXXXXXXXXXXXHGVLKKDLKTVMRSI-IRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*DGE 781
            IK +SNF+R  L E L  +          QL+KFHG YQQ +RD R  +        YSF+LR + P G V+ Q  L +D +A +    G            HG+ K++LK+V + +  ++   ++   GD+NRNV+    P+  + +      +  I+  L P S  + E+W+DGE++ + E
Sbjct:   11 IKIESNFLRGKLVEGLNDNTTGAFIPDDVQLVKFHGLYQQDHRDYRAERKKQKLEPLYSFLLRARLPGGVVTPQQLLEIDRIASELTDAGSIRLTTRQTFQYHGIYKRNLKSVFQELKFKANIDSIFTAGDVNRNVICTSNPMQSELHAEVYDWSTKISEMLLPHSNAFAEIWLDGEKVHETE 193          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_PSEA6 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=cysI PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.672e-15
Identity = 55/177 (31.07%), Postives = 91/177 (51.41%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPNVNESAT-QLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGI-GXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQ 766
            +K +SNF+R  + E+L  D          QLI+FHG YQQ +RD R  ++        + MLR + P G +  Q +L +D  A++  + G            HGVLK ++K + +++ +    ++   GD+NRNVL    P+    +  A + A  I+  L P++  Y E+W+DGE+
Sbjct:   19 LKGESNFLRGTIAEDLKDDLTGAFVGDNFQLIRFHGMYQQDDRDLRAERAKQKLEPLQNVMLRARLPGGIIKPQQWLAIDKFAEEKSLYGSIRLTTRQTFQFHGVLKPNIKLMHQTLNQVGIDSIATAGDVNRNVLCTSNPIESAVHQEAYEWATKISEHLLPKTRAYAEIWLDGEK 195          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_VIBF1 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=cysI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.852e-15
Identity = 55/179 (30.73%), Postives = 95/179 (53.07%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQF-GIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMG-STLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            +K +S ++R  + E+L         +   QLI+FHG YQQ +RD R  ++       ++ MLR + P G ++ + +L +D  A++    G            HGVLK ++K +M   + S+G  ++   GD+NRNVL    P+  + +  A + AK I+  L P++  Y E+W+DGE++
Sbjct:   25 LKRESKYLRGTIVEDLQDRITGGFTKDNFQLIRFHGMYQQDDRDIRAERAKQKLEPLHNVMLRARMPGGIITPKQWLAIDKFAEEHTSYGSLRLTTRQTFQFHGVLKPNIK-LMHQTLNSIGIDSIATAGDVNRNVLCTTNPVESELHQEAYEWAKKISEHLLPKTRAYAEIWLDGEKL 202          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_PSEHT (Sulfite reductase [NADPH] hemoprotein beta-component OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=cysI PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.865e-15
Identity = 57/185 (30.81%), Postives = 95/185 (51.35%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQ-FGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMG-STLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*DGEPP 787
            +K +SNF+R  +  +L  +          QLI+FHG YQQ +RD RG ++       ++ MLR + P G +  + +L +D  A++    G            HGVLK ++K  M  ++ S+G  ++   GD+NRNVL    P+  + +  A + A  I+  L P++  Y E+W++GE+    E P
Sbjct:   16 MKRESNFLRGTIATDLKDEITGGFTADNFQLIRFHGMYQQDDRDIRGERAKQKLEPLHNVMLRARMPGGIIKPEQWLAIDKFAEEKTSYGSIRLTTRQTFQFHGVLKPNIKG-MHQLLDSVGIDSIATAGDVNRNVLCTTNPVESELHQEAYEWAAKISEHLLPKTKAYAEIWLNGEKAETTEEP 199          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_VIBSL (Sulfite reductase [NADPH] hemoprotein beta-component OS=Vibrio splendidus (strain LGP32) GN=cysI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.354e-15
Identity = 51/150 (34.00%), Postives = 83/150 (55.33%), Query Frame = 2
Query:  347 QLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQF-GIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMG-STLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            QLI+FHG YQQ +RD R  ++       ++ MLR + P G ++ + +L +D  AD+    G            HGVLK ++K +M   + S+G  ++   GD+NRNVL    P+  + +  A + AK I+  L P++  Y E+W+DGE++
Sbjct:   53 QLIRFHGMYQQDDRDIRNERTKQKLEPLHNVMLRARMPGGIITPKQWLAIDKFADESTSYGSIRLTTRQTFQFHGVLKPNIK-LMHQTLNSIGIDSIATAGDVNRNVLCTTNPVESELHQEAYEWAKKISEHLLPKTRAYAEIWLDGEKL 201          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_BUCAT (Sulfite reductase [NADPH] hemoprotein beta-component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=cysI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.354e-15
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGI-GXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMG-STLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            IKE SN++R  + ++L  +  N        LI+FHG YQQ +RD R  ++       Y+ MLR + P G +  + +L +D  A ++ + G            HG+LKK+LK V   ++ S+G  +L    D+NRNVL    P+    +  A + A+ I+  L P +  Y E+W+D ++I
Sbjct:   20 IKENSNYLRGTITDDLKNEITNGFTGDNFSLIRFHGMYQQDDRDLRIERNEQKLEPRYAMMLRCRLPGGVIKAKKWLKIDYFASKYTLYGTIRLTNRQTFQFHGILKKNLKDV-HKMLHSIGLDSLATANDVNRNVLCTSNPMESLIHQEAYEWARKISNFLLPHTKAYAEIWLDQKKI 197          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_BUCAI (Sulfite reductase [NADPH] hemoprotein beta-component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.354e-15
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGI-GXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMG-STLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            IKE SN++R  + ++L  +  N        LI+FHG YQQ +RD R  ++       Y+ MLR + P G +  + +L +D  A ++ + G            HG+LKK+LK V   ++ S+G  +L    D+NRNVL    P+    +  A + A+ I+  L P +  Y E+W+D ++I
Sbjct:   20 IKENSNYLRGTITDDLKNEITNGFTGDNFSLIRFHGMYQQDDRDLRIERNEQKLEPRYAMMLRCRLPGGVIKAKKWLKIDYFASKYTLYGTIRLTNRQTFQFHGILKKNLKDV-HKMLHSIGLDSLATANDVNRNVLCTSNPMESLIHQEAYEWARKISNFLLPHTKAYAEIWLDQKKI 197          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_BUCA5 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=cysI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.354e-15
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGI-GXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMG-STLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            IKE SN++R  + ++L  +  N        LI+FHG YQQ +RD R  ++       Y+ MLR + P G +  + +L +D  A ++ + G            HG+LKK+LK V   ++ S+G  +L    D+NRNVL    P+    +  A + A+ I+  L P +  Y E+W+D ++I
Sbjct:   20 IKENSNYLRGTITDDLKNEITNGFTGDNFSLIRFHGMYQQDDRDLRIERNEQKLEPRYAMMLRCRLPGGVIKAKKWLKIDYFASKYTLYGTIRLTNRQTFQFHGILKKNLKDV-HKMLHSIGLDSLATANDVNRNVLCTSNPMESLIHQEAYEWARKISNFLLPHTKAYAEIWLDQKKI 197          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_VIBFM (Sulfite reductase [NADPH] hemoprotein beta-component OS=Vibrio fischeri (strain MJ11) GN=cysI PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 8.298e-15
Identity = 55/179 (30.73%), Postives = 94/179 (52.51%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQF-GIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMG-STLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI 769
            +K +S  +R  + E+L         +   QLI+FHG YQQ +RD R  ++       ++ MLR + P G ++ + +L +D  A++    G            HGVLK ++K +M   + S+G  ++   GD+NRNVL    P+  + +  A + AK I+  L P++  Y E+W+DGE++
Sbjct:   25 LKRESKHLRGTIVEDLQDRITGGFTKDNFQLIRFHGMYQQDDRDIRAERAKQKLEPLHNVMLRARMPGGIITPKQWLAIDKFAEEHTSYGSLRLTTRQTFQFHGVLKPNIK-LMHQTLNSIGIDSIATAGDVNRNVLCTTNPVESELHQEAYEWAKKISEHLLPKTRAYAEIWLDGEKL 202          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_BLOFL (Sulfite reductase [NADPH] hemoprotein beta-component OS=Blochmannia floridanus GN=cysI PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.849e-14
Identity = 57/187 (30.48%), Postives = 99/187 (52.94%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEEL---LTDAPNVNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGI-GXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI--*DGEP 784
            IK+ SNF+R  + ++L   LT   NV+ +  QLI+FHG YQQ +RD R  +         + MLR + P G +++Q +L +D+ +++  +              HG+LK  LK + + + +    ++   GD+NRNV+    P+  K +    + +K I+  L P+S  Y E+W++ ++I   D EP
Sbjct:   17 IKKNSNFLRGTIEKDLDNNLTGGFNVDNA--QLIRFHGMYQQDDRDVRLERMNQKLEPLINMMLRCRLPGGVITSQQWLNIDNFSEEQTLYSSIRLTTRQTFQLHGILKPKLKGIHQLLNKLGLDSIATAGDVNRNVICTANPMESKVHYQIWELSKKISEHLLPKSKAYAEIWLNEKKIESIDSEP 201          
The following BLAST results are available for this feature:
BLAST of DY259817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
CYSI_PSYIN1.672e-1531.15Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_PSEA61.672e-1531.07Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_VIBF12.852e-1530.73Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_PSEHT4.865e-1530.81Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_VIBSL6.354e-1534.00Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BUCAT6.354e-1531.84Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BUCAI6.354e-1531.84Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BUCA56.354e-1531.84Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_VIBFM8.298e-1530.73Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BLOFL1.849e-1430.48Sulfite reductase [NADPH] hemoprotein beta-compone... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259817 ID=DY259817; Name=DY259817; organism=Citrus clementina; type=EST; length=1060bp
TTTGAAAACATTTGCTGTTGCGTTTGCGAGGGCTATGACGACGTCGTTTG
GAGCCGCCAACACCGTGATTCCGAACAATCCGAACATTCGGATTCGGAGC
TTTAACGGGTTGAAGCCTTCGCATTCGCTCTCTATCAGGACAAATCTGCG
CGCTTTTCCCGTTCCGTACGCCTCACGGAGTTCGGTCGTCAGAGCTGTGT
CCACGCCAGTAAAGCCGGAGACTGAGACCAAGACTGAGACTAAGCGAAGT
AAAGTGGAAATAATCAAAGAGCAAAGTAATTTCATAAGGTACCCTCTTAA
TGAGGAGTTGTTGACAGATGCCCCGAATGTAAATGAGTCTGCTACGCAGT
TAATAAAGTTTCATGGGAGCTACCAACAGTATAATAGAGATGAGCGTGGT
GCAAAATCGTACTCATTCATGCTTCGAACTAAGAATCCTTGCGGAAAAGT
CTCGAACCAACTGTACTTGACCATGGATGATCTTGCGGATCAGTTTGGTA
TCGGAACCCTTCGTCTGACTACCAGACAAACTTTTCAGCTCCATGGTGTC
TTGAAGAAGGACCTGAAGACAGTAATGAGAAGCATTATTAGAAGTATGGG
TTCAACTCTTGGTGCATGCGGTGATCTCAATAGGAATGTTCTTGCTCCTC
CTGCTCCTCTGGTGAGGAAAGATTACTTATTTGCACAGAAAACAGCAAAG
AACATTGCTGCTCCGCTCACGCCTCAGTCGGGTTTCTACTATGAAATGTG
GGTGGATGGGGAGCAAATTTAGGACGGCGAACCCCCCTGAAGTGGGTAAA
GGAACGTAATGAAAATTCTCATGGAAACCAATTTCCCCGGATTCTCCTGG
GCCCCTTTAAGGGGAATCCCTTCTTGGCCAAGGAAGTTTCAATTTTCGCT
AACCGGGGCCCAAAAAAAACCCCCGGGGGAAATTCTAACACAAAGAGAAT
ATGGGGGTGTCGGGGGTTCTCAAACAAACACGGGGGAACCCTCGGGAGAT
CCTCTCTTTTTTTGTGGGGGGGGGATAGGAGGAAAACTCTCTGGCTCTGG
CGCCACTCCC
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