DY259818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 6.889e-22 Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALD 362 QI TAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NIVI+L GNK DL R V+ +A FA++ F+ETSAL NVE AF + +I + LD Sbjct: 60 QIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELD 179
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB4A_DANRE (Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 6.889e-22 Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALD 362 QI TAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NIVI+L GNK DL R V+ +A FA++ F+ETSAL NVE AF + +I + LD Sbjct: 60 QIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELD 179
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 6.889e-22 Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALD 362 QI TAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NIVI+L GNK DL R V+ +A FA++ F+ETSAL NVE AF + +I + LD Sbjct: 60 QIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELD 179
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RHN1_NICPL (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.998e-22 Identity = 55/148 (37.16%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 15 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCCS 458 TAGQERY ++ YYRGA A++VYD+T +F ++W++EL+ + N+V+ L GNKADL R V+ E+A+ +AE+ FFMETSA ++NV F E+ ++ R PA P G + + T CC+ Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPRA----------QPAQNPAGMVL---VDRAAEGTRATSCCT 200
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.998e-22 Identity = 59/151 (39.07%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCC 455 QI TAGQER+R IT+AYYRGA+G LLVYDVT +F ++ W++ + H ++ ML+GNK D+ + V + +S A++ F+ETSA S+NVE AF + I ++ +D +DP TI I + KK CC Sbjct: 67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDI----KKRMIDTPNDP-----DHTICITPNN-----KKNTCC 203
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 8.998e-22 Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 3 Query: 15 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCCS 458 TAGQERY ++ YYRGA A++VYD+T TF + W+KEL+ NIVI L GNKADL RAV ++AQ++A+ + FMETSA ++NV +I+ +++K AA G+T + ++ + ++ CCS Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNV--------NEIFMAIAKKLPKNEPQNAAGAPGRTRGVDLQES-NPASRSQCCS 215
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.998e-22 Identity = 58/149 (38.93%), Postives = 83/149 (55.70%), Query Frame = 3 Query: 15 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTIN-IGTKDDVSAVKKTGCCS 458 TAGQERY ++ YYRGA A++VYD+T TF + W+KEL+ NIVI L GNKADL RAV +DAQ++A+ + FMETSA ++NV F + ++ + ++P P G N + + S ++ CCS Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPK----------NEPQNAPGGPGRNRVVDLQESSQPSRSQCCS 215
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.998e-22 Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALD 362 QI TAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R NIV++L GNK DL R V+ +A FA++ F+ETSAL NVE AF + I + LD Sbjct: 60 QIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELD 179
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 8.998e-22 Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALD 362 QI TAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R NIV++L GNK DL R V+ +A FA++ F+ETSAL NVE AF + I + LD Sbjct: 60 QIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELD 179
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.998e-22 Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALD 362 QI TAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R NIV++L GNK DL R V+ +A FA++ F+ETSAL NVE AF + I + LD Sbjct: 60 QIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELD 179 The following BLAST results are available for this feature:
BLAST of DY259818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259818 ID=DY259818; Name=DY259818; organism=Citrus clementina; type=EST; length=1049bpback to top |