DY259818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.653e-23 Identity = 58/151 (38.41%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCC 455 QI TAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W++ + H ++ ML+GNK D+ + V + +S A++ F+ETSA S+NVE AF + I ++ +D ++ + Q + GT + KK CC Sbjct: 67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDI----KKRMIDTPNE-----QPQVVQPGTNLGANNNKKKACC 208
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.653e-23 Identity = 65/152 (42.76%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQI-YRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCC 455 QI TAGQER+R ITS+YYRGA G ++VYDVT +TFENV +WL+E+ N+ +LVGNK+DL + V A++FA+ F+ETSA +S NVE AF + T+I R+ + + D +P G+ +S K+GCC Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDKNKVVP-------GSSAPIS--PKSGCC 202
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.771e-23 Identity = 68/156 (43.59%), Postives = 89/156 (57.05%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL-RHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVS----AVKKTGCC 455 QI TAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W++ + H N+ +LVGNKAD+ RAV T Q+ A++ F ETSA +LNVE EV I R + ++ D D A P TI I D + A +K+ CC Sbjct: 67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVE----EVFFSIGRDIKQRLSDT--DSRAEP--ATIKISQTDQAAGAGQATQKSACC 214
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RHA1_ARATH (Ras-related protein RHA1 OS=Arabidopsis thaliana GN=RHA1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 6.231e-23 Identity = 56/148 (37.84%), Postives = 87/148 (58.78%), Query Frame = 3 Query: 15 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCCS 458 TAGQERY ++ YYRGA A++V+D+T +FE ++W++EL+ + N+V+ L GNKADL R VS E+A+ +A++ + FFMETSA + NV++ F E+ ++ RV PA P G + G + + CC+ Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRV----------QPAENPTGMVLPNGPG---ATAVSSSCCA 200
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 8.138e-23 Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINI 410 QI TAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E + A FMETSA ++NVENAF + I + +K G+ P G I + Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL--EGNSPQGSSHGVKITV 193
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 8.138e-23 Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINI 410 QI TAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E + A FMETSA ++NVENAF + I + +K G+ P G I + Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL--EGNSPQGSSHGVKITV 193
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.063e-22 Identity = 57/110 (51.82%), Postives = 74/110 (67.27%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQI 332 QI TAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL R VST+ A+ FAE F+ETSA + NVE AF + QI Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI 169
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.063e-22 Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTI 404 QI TAGQER+R IT+AYYRGA+G +LVYD+T +FEN+ W++ + +H ++ M++GNK D R VS E + A FMETSA ++N+ENAF + I + +K G+ P +G I Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKL--EGNSPQGSNQGVKI 191
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.063e-22 Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQI 332 QI TAGQER+R++T AYYR A LL+YDVT +F++++ WL E+++H ++V+ML+GNK D RAV EDA+ A+ FMETSA LNV+ AFT + ++ Sbjct: 116 QIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.063e-22 Identity = 53/113 (46.90%), Postives = 78/113 (69.03%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRV 341 QI TAGQER+R ITS+YYRGA G ++VYDVT HV+F NV++W++E++ + ++ +LVGNK DL + V T A+ +A+ F+ETSA S NVE AF + ++I ++ Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKL 172 The following BLAST results are available for this feature:
BLAST of DY259818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259818 ID=DY259818; Name=DY259818; organism=Citrus clementina; type=EST; length=1049bpback to top |