DY259818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RB43L_HUMAN (Putative Rab-43-like protein ENSP00000330714 OS=Homo sapiens PE=5 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 1.388e-22 Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF-FMETSALESLNVENAFTEVLTQI 332 QI TAGQER+R IT +YYR A GA+L YD+T+ +F +V W++++R + SNIV +L+GNK+DL LR VS +AQS AE + +ETSA +S NVE AF V T++ Sbjct: 39 QIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 149
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.388e-22 Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTI 404 QI TAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E + A FMETSA ++NVENAF + I + +K G+ P +G I Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL--EGNSPQGSNQGVKI 191
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.388e-22 Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTI 404 QI TAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E + A FMETSA ++NVENAF + I + +K G+ P +G I Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL--EGNSPQGSNQGVKI 191
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.388e-22 Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTI 404 QI TAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E + A FMETSA ++NVENAF + I + +K G+ P +G I Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL--EGNSPQGSNQGVKI 191
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.388e-22 Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTI 404 QI TAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E + A FMETSA ++NVENAF + I + +K G+ P +G I Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKL--EGNSPQGSNQGVKI 191
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB43_RAT (Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.388e-22 Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF-FMETSALESLNVENAFTEVLTQI 332 QI TAGQER+R IT +YYR A GA+L YD+++ TF +V W++++R + SNIV +L+GNK+DL LR V +AQS AE + +ETSA +S NVE AFT V T++ Sbjct: 68 QIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.388e-22 Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF-FMETSALESLNVENAFTEVLTQI 332 QI TAGQER+R IT +YYR A GA+L YD+T+ +F +V W++++R + SNIV +L+GNK+DL LR VS +AQS AE + +ETSA +S NVE AF V T++ Sbjct: 70 QIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.813e-22 Identity = 61/153 (39.87%), Postives = 89/153 (58.17%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQI-YRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCCS 458 QI TAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK DL R VS E ++ A++ F+ETSA ++ NVE AF + +I R+ S+ A + +GQ + +++ CCS Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQPV----------AQQSSCCS 202
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RB39B_MOUSE (Ras-related protein Rab-39B OS=Mus musculus GN=Rab39b PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.813e-22 Identity = 56/137 (40.88%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS-NIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINI 410 QI TAGQER+R+IT AYYR +VG LL++D+T +F+NV WL+E + H IV +LVG+K DL R V+ +A+ A ++ETSA +++NVE AFT++ IY +V R + + + + G N+ Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGWEGVKSGFVPNV 197
BLAST of DY259818 vs. ExPASy Swiss-Prot
Match: RB39B_HUMAN (Ras-related protein Rab-39B OS=Homo sapiens GN=RAB39B PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.813e-22 Identity = 56/137 (40.88%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 3 QISFTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS-NIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINI 410 QI TAGQER+R+IT AYYR +VG LL++D+T +F+NV WL+E + H IV +LVG+K DL R V+ +A+ A ++ETSA +++NVE AFT++ IY +V R + + + + G N+ Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGWEGVKSGFVPNV 197 The following BLAST results are available for this feature:
BLAST of DY259818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259818 ID=DY259818; Name=DY259818; organism=Citrus clementina; type=EST; length=1049bpback to top |