DY259819

Overview
NameDY259819
Unique NameDY259819
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length983
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP73_PLAFA (Heat shock 70 kDa protein PPF203 (Fragment) OS=Plasmodium falciparum PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.075e-13
Identity = 31/77 (40.26%), Postives = 52/77 (67.53%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELE 247
            KYK EDE++K ++EA+N LENY +N++NT+QDE + +K+   D +K    +   + WL+ N  AE +E+ ++ K+ E
Sbjct:  124 KYKEEDEQNKNRIEARNNLENYCYNVKNTLQDENLKTKIPKDDSEKCMKTVKSVLDWLEKNQTAETEEYNEKEKDTE 200          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.834e-13
Identity = 32/88 (36.36%), Postives = 56/88 (63.64%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMY 280
            KYK EDE+  K++ AKN LE+YA++++ T  +++   K++ + ++    A D  I WLD N  A A+E++D+ KELE   + ++  +Y
Sbjct:  522 KYKEEDEKEAKRIAAKNGLESYAYSLKQTTSEKQFEEKVEASKREAFTKACDDTIAWLDENQTATAEEYDDKRKELEQAGNEVLKDLY 609          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.834e-13
Identity = 37/90 (41.11%), Postives = 64/90 (71.11%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEK-IGSKLDPADKKKIEDAIDQAIQWLDSN-PLAEADEFEDQMKELESICDPIIAKMY 280
            K+  +D+E ++KVE++NALENYA +++N   DE   G+KL+  DK+ + DAI++A+++L+ N   A  DEF++Q ++L  +  PI +K+Y
Sbjct:  557 KFAQQDKELREKVESRNALENYAHSLKNQANDENGFGAKLEEDDKETLLDAINEALEFLEDNFDTATKDEFDEQKEKLSKVAYPITSKLY 646          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.086e-13
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMY 280
            KYK ED+  +++V++KN LE Y +  R  V D   G  L   ++ K+ D       WLD N LAE +EFE  +KE + IC PI++K++
Sbjct:  525 KYKVEDDRQRERVQSKNNLEAYIYACRQAVDDAPSGV-LSETERSKVRDKCSSEASWLDKNSLAEKEEFESHLKECQRICTPIMSKIH 611          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.337e-13
Identity = 34/90 (37.78%), Postives = 61/90 (67.78%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQD-EKIGSKLDPADKKKIEDAIDQAIQWLD-SNPLAEADEFEDQMKELESICDPIIAKMY 280
            ++  ED+  K+++EA+N LENYA++++    D E++G K+DP DK+ + DA++   +WL+     A  +EFEDQ ++L+++  PI  K+Y
Sbjct:  552 EFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.337e-13
Identity = 37/97 (38.14%), Postives = 65/97 (67.01%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEK---IGSKLDPADKKKIEDAIDQAIQWLDSN-PLAEADEFEDQMKELESICDPIIAKMY 280
            V+   KY  +D E K K+E++N+LENYA  ++  V+DE    +GSKL+  DK+ ++DAI + +++++ N   A ++EFE+Q ++L  +  PI +K+Y
Sbjct:  561 VEEAEKYAEQDSELKAKIESRNSLENYAHMLKGQVKDESENGLGSKLNDDDKETLDDAIKETLEFIEDNYDSATSEEFEEQKQKLIDVASPITSKLY 657          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.518e-12
Identity = 34/96 (35.42%), Postives = 64/96 (66.67%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEK-IGSKLDPADKKKIEDAIDQAIQWLDSNPL-AEADEFEDQMKELESICDPIIAKMYQ 283
            V+   ++  ED   ++ +EAKN+LENYA ++RN V D+  +G K+   DK+ + DA+ + ++WL++N + A  ++FE++ + L +I  PI +K+Y+
Sbjct:  549 VEEAERFAEEDALIRETIEAKNSLENYAHSLRNQVADKSGLGGKISADDKEALNDAVTETLEWLEANSVSATKEDFEEKKEALSAIAYPITSKIYE 644          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: GRP78_YEAST (78 kDa glucose-regulated protein homolog OS=Saccharomyces cerevisiae GN=KAR2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.706e-12
Identity = 35/94 (37.23%), Postives = 60/94 (63.83%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSN-PLAEADEFEDQMKELESICDPIIAKMY 280
            V+   K+ +ED   K KVE++N LENYA +++N V  + +G KL+  DK+ + DA +  ++WLD N   A A++F+++ + L  +  PI +K+Y
Sbjct:  562 VEEAEKFASEDASIKAKVESRNKLENYAHSLKNQVNGD-LGEKLEEEDKETLLDAANDVLEWLDDNFETAIAEDFDEKFESLSKVAYPITSKLY 654          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.520e-11
Identity = 33/92 (35.87%), Postives = 60/92 (65.22%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWL-DSNPLAEADEFEDQMKELESICDPIIAK 274
            V+   KY AED + K K EA+N  EN+   ++N+V  E +   +D  DK+ + D ++++++WL D++ +AEA++FE++M   +   +PI+AK
Sbjct:  563 VEEAEKYAAEDAKFKAKSEARNTFENFVHYVKNSVNGE-LAEIMDEDDKETVLDNVNESLEWLEDNSDVAEAEDFEEKMASFKESVEPILAK 653          
The following BLAST results are available for this feature:
BLAST of DY259819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HSP73_PLAFA1.075e-1340.26Heat shock 70 kDa protein PPF203 (Fragment) OS=Pla... [more]
HSP72_PICAN1.834e-1336.36Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
GRP78_PICAN1.834e-1341.1178 kDa glucose-regulated protein homolog OS=Pichia... [more]
HSP7B_DROME4.086e-1339.77Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
GRP78_SCHPO5.337e-1337.7878 kDa glucose-regulated protein homolog OS=Schizo... [more]
GRP78_DEBHA5.337e-1338.1478 kDa glucose-regulated protein homolog OS=Debary... [more]
GRP78_YARLI4.518e-1235.4278 kDa glucose-regulated protein homolog OS=Yarrow... [more]
GRP78_YEAST7.706e-1237.2378 kDa glucose-regulated protein homolog OS=Saccha... [more]
GRP78_KLULA8.520e-1135.8778 kDa glucose-regulated protein homolog OS=Kluyve... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259819 ID=DY259819; Name=DY259819; organism=Citrus clementina; type=EST; length=983bp
GGTTCAACACCTTTAGAAGTACAAAGCTGAAGACGAGGAGCACAAGAAGA
AGGTCGAGGCCAAGAATGCCTTGGAAAACTATGCCTTCAATATGAGGAAC
ACTGTCCAGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAA
GAAGATTGAGGATGCCATTGATCAGGCAATTCAATGGCTTGATAGCAACC
CGCTGGCTGAGGCCGATGAATTTGAAGACCAGATGAAGGAGCTTGAGAGC
ATCTGCGATCCCATCATTGCCAAGATGTATCAAGGTGCTGGTGGTGATAT
GGGCGGTGGCATGGATGATGATGCTCCTCCAGCTGGAGGCAGTGCGGCCG
GTCCCAAGATTGAGGAAGTTGACCACGCTACCCGTTGCAGGATGTAGCGC
CACACACACACGAGTCCGCAACGCCATCCCCCGCGGAGCTCAAACTAGGA
CATCAAAACTCCTGGCCCCAGACCCAAAATCCACGGTCCCACTCGCCAGC
GGAAGCCAGGACCCCATTGACCCAGGTCATTCCCTAAACAAGAAGCCCCA
CCGCGCATACATACTCCCTAAAGCGGCGGACAATTCTACCCCGCAACCAC
CGACAGCTGGCAGAATCGACGACCTAACGAGCAGAGGCCAATTTCTGCTC
GGCCGTGACGTAGGTCTTGAACTTATGACCGTTCACCTCAATCGCCGTGC
CACTATGTTCAAATCCCCCGCACGCACCCGACCAGTCCTCCCCCCACATG
CAACACCTCCTCCCACTCCCCAACCATTCTACTTTCCTCTATGCATCTGG
TTCTCCTCATTTCGTTTTCCCCATTCCTCCCGCATACCCAAATACCCCTC
CTCGAATTGCACCCACACACGAACCGACCTGCTACACCACCGGCCCTACG
CCCGCACGACCCTGTTCATCTAGCTATTTCTTCCTACCTCATTCCTACAT
TCTGACCTGCACGGCCCAGTCGGGCTCTCATCC
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