DY259819

Overview
NameDY259819
Unique NameDY259819
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length983
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.037e-24
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE+ + KV +KN+LE+YAFNM+ TV+DEK+  K++  DK+KI D  ++ I WLD N  AE +EFE Q KELE +C+PII K+YQ
Sbjct:  519 VQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.037e-24
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE+ + KV +KN+LE+YAFNM+ TV+DEK+  K++  DK+KI D  ++ I WLD N  AE +EFE Q KELE +C+PII K+YQ
Sbjct:  519 VQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.037e-24
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE+ + KV +KN+LE+YAFNM+ TV+DEK+  K++  DK+KI D  ++ I WLD N  AE +EFE Q KELE +C+PII K+YQ
Sbjct:  519 VQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.037e-24
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE+ + KV +KN+LE+YAFNM+ TV+DEK+  K++  DK+KI D  ++ I WLD N  AE +EFE Q KELE +C+PII K+YQ
Sbjct:  519 VQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.354e-24
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE  +++V AKNALE+YAFNM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE + KELE +C+PII+ +YQ
Sbjct:  519 VQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 114.005 bits (284), Expect = 1.354e-24
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE  +++V AKNALE+YAFNM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE + KELE +C+PII+ +YQ
Sbjct:  519 VQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.768e-24
Identity = 51/94 (54.26%), Postives = 75/94 (79.79%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKA+DE+  KKVEAKN+LENYA+NMRNT++++K+ S+L  +DK+ +E A+  A+ WL++N +AE +EFE  +KELE +C+PII ++YQ
Sbjct:  525 VQEAEKYKADDEQ-LKKVEAKNSLENYAYNMRNTIREDKVASQLSASDKESMEKALTAAMDWLEANQMAEVEEFEHHLKELEGLCNPIITRLYQ 617
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.768e-24
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE  +++V AKNALE+YAFNM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE + KELE +C+PII+ +YQ
Sbjct:  519 VQEAEKYKAEDEIQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.310e-24
Identity = 53/94 (56.38%), Postives = 68/94 (72.34%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAED+  + KV AKN LE+YAFNM++TV+DEK+  K+   DK+KI D  ++ I WLD N  AE +EFE Q KELE +C+PII K+YQ
Sbjct:  519 VQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 53/94 (56.38%), Postives = 68/94 (72.34%), Query Frame = 2 
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE  + +V AKNALE+YAFNM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE + KELE +C+PII  +YQ
Sbjct:  519 VQEAEKYKAEDEVQRDRVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIITGLYQ 612
The following BLAST results are available for this feature:
BLAST of DY259819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HSP7C_HUMAN1.037e-2456.38Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE1.037e-2456.38Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR1.037e-2456.38Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN1.037e-2456.38Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP71_PONAB1.354e-2456.38Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN1.354e-2456.38Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP70_CHLRE1.768e-2454.26Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HS71B_PIG1.768e-2456.38Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HSP7C_DANRE2.310e-2456.38Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP71_CANFA3.016e-2456.38Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259819 ID=DY259819; Name=DY259819; organism=Citrus clementina; type=EST; length=983bp
GGTTCAACACCTTTAGAAGTACAAAGCTGAAGACGAGGAGCACAAGAAGA
AGGTCGAGGCCAAGAATGCCTTGGAAAACTATGCCTTCAATATGAGGAAC
ACTGTCCAGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAA
GAAGATTGAGGATGCCATTGATCAGGCAATTCAATGGCTTGATAGCAACC
CGCTGGCTGAGGCCGATGAATTTGAAGACCAGATGAAGGAGCTTGAGAGC
ATCTGCGATCCCATCATTGCCAAGATGTATCAAGGTGCTGGTGGTGATAT
GGGCGGTGGCATGGATGATGATGCTCCTCCAGCTGGAGGCAGTGCGGCCG
GTCCCAAGATTGAGGAAGTTGACCACGCTACCCGTTGCAGGATGTAGCGC
CACACACACACGAGTCCGCAACGCCATCCCCCGCGGAGCTCAAACTAGGA
CATCAAAACTCCTGGCCCCAGACCCAAAATCCACGGTCCCACTCGCCAGC
GGAAGCCAGGACCCCATTGACCCAGGTCATTCCCTAAACAAGAAGCCCCA
CCGCGCATACATACTCCCTAAAGCGGCGGACAATTCTACCCCGCAACCAC
CGACAGCTGGCAGAATCGACGACCTAACGAGCAGAGGCCAATTTCTGCTC
GGCCGTGACGTAGGTCTTGAACTTATGACCGTTCACCTCAATCGCCGTGC
CACTATGTTCAAATCCCCCGCACGCACCCGACCAGTCCTCCCCCCACATG
CAACACCTCCTCCCACTCCCCAACCATTCTACTTTCCTCTATGCATCTGG
TTCTCCTCATTTCGTTTTCCCCATTCCTCCCGCATACCCAAATACCCCTC
CTCGAATTGCACCCACACACGAACCGACCTGCTACACCACCGGCCCTACG
CCCGCACGACCCTGTTCATCTAGCTATTTCTTCCTACCTCATTCCTACAT
TCTGACCTGCACGGCCCAGTCGGGCTCTCATCC
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