DY259819

Overview
NameDY259819
Unique NameDY259819
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length983
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.016e-24
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE  +++V AKNALE+YAFNM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE + KELE +C+PII+ +YQ
Sbjct:  519 VQEAEKYKAEDEIQRERVGAKNALESYAFNMKSVVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.940e-24
Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAED+  + KV AKN LE+YAFNM++TV+DEK+  K+   DK+KI D  ++ I WLD N  AE DE+  Q KELE +C+PII K+YQ
Sbjct:  517 VQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLAGKISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQ 610          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.940e-24
Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAED+  + KV AKN LE+YAFNM++TV+DEK+  K+   DK KI D  ++ I WLD N  AE DE+E Q K+LE +C+PII K+YQ
Sbjct:  519 VQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQ 612          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.720e-24
Identity = 52/94 (55.32%), Postives = 69/94 (73.40%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAEDE  +++V AKNALE+YA NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE + KELE +C+PII+ +YQ
Sbjct:  516 VQEAEKYKAEDEVQRERVSAKNALESYALNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 609          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.777e-24
Identity = 48/94 (51.06%), Postives = 70/94 (74.47%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYKAED+  ++K+ AKN+LE+YAFNM+++V+D+ +  K+   DKKK+ D  DQ I WL++N L + +E+E Q+KELE +C PII K+YQ
Sbjct:  521 VQDADKYKAEDDAQREKIAAKNSLESYAFNMKSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEYEHQLKELEKVCQPIITKLYQ 614          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.955e-23
Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMY 280
            VQ   KYK+EDE +  ++EAKN LENYA+N+RNT+ DEK+  K+D +DKK I+D +   I WLD N  AE +EFE + KELE I +PI+ KMY
Sbjct:  522 VQEAEKYKSEDEANNVRIEAKNGLENYAYNLRNTLNDEKLQGKIDESDKKVIDDKVTDIINWLDHNQSAEKEEFEAKQKELEGIANPIMQKMY 614          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.955e-23
Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            KYKAEDE  ++K+ AKNALE+YAFNM++ V DE +  K+  ADKKKI +  ++A+ WL++N LAE DEF+ + +ELE +C+PII K+YQ
Sbjct:  526 KYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQ 614          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 109.768 bits (273), Expect = 2.554e-23
Identity = 50/94 (53.19%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   +YKAEDE  ++K+ AKNALE+YAFNM++ V DE +  K+  +DKKKI D  ++ + WL++N LAE DEF+ + KELE++C+PII K+YQ
Sbjct:  521 VQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCNEVLSWLEANQLAEKDEFDHKRKELENMCNPIITKLYQ 614          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.335e-23
Identity = 49/89 (55.06%), Postives = 68/89 (76.40%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            KYKAEDE  ++K+ AKNALE+YAFNM++ V DE +  K+  +DKKKI D  ++ + WL++N LAE DEF+ + KELE +C+PII K+YQ
Sbjct:  526 KYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKKKILDKCNELLSWLEANQLAEKDEFDHKRKELEQMCNPIITKLYQ 614          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: MAG29_DERFA (Allergen MAG29 (Fragment) OS=Dermatophagoides farinae GN=MAG29 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.356e-23
Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 2
Query:   20 YKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            YK ED++ + ++ AKN+LE YAF M+ T+ +E I SK+   D+KKI D +D+ ++WLD+N LAE DEFE Q KELES+C+PII K+YQ
Sbjct:   14 YKEEDDKQRDRIAAKNSLEGYAFQMKATLDEEAIKSKVSEEDRKKILDKVDEVLKWLDANALAEKDEFEHQRKELESVCNPIITKLYQ 101          
The following BLAST results are available for this feature:
BLAST of DY259819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HS71A_PIG3.016e-2456.38Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HSP7C_ORYLA3.940e-2455.32Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP7C_ICTPU3.940e-2455.32Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP71_CERAE6.720e-2455.32Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_ONCTS8.777e-2451.06Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP70_ACHKL1.955e-2354.84Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HS71L_PIG1.955e-2355.06Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_MOUSE2.554e-2353.19Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HS71L_MACFA3.335e-2355.06Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
MAG29_DERFA4.356e-2354.55Allergen MAG29 (Fragment) OS=Dermatophagoides fari... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259819 ID=DY259819; Name=DY259819; organism=Citrus clementina; type=EST; length=983bp
GGTTCAACACCTTTAGAAGTACAAAGCTGAAGACGAGGAGCACAAGAAGA
AGGTCGAGGCCAAGAATGCCTTGGAAAACTATGCCTTCAATATGAGGAAC
ACTGTCCAGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAA
GAAGATTGAGGATGCCATTGATCAGGCAATTCAATGGCTTGATAGCAACC
CGCTGGCTGAGGCCGATGAATTTGAAGACCAGATGAAGGAGCTTGAGAGC
ATCTGCGATCCCATCATTGCCAAGATGTATCAAGGTGCTGGTGGTGATAT
GGGCGGTGGCATGGATGATGATGCTCCTCCAGCTGGAGGCAGTGCGGCCG
GTCCCAAGATTGAGGAAGTTGACCACGCTACCCGTTGCAGGATGTAGCGC
CACACACACACGAGTCCGCAACGCCATCCCCCGCGGAGCTCAAACTAGGA
CATCAAAACTCCTGGCCCCAGACCCAAAATCCACGGTCCCACTCGCCAGC
GGAAGCCAGGACCCCATTGACCCAGGTCATTCCCTAAACAAGAAGCCCCA
CCGCGCATACATACTCCCTAAAGCGGCGGACAATTCTACCCCGCAACCAC
CGACAGCTGGCAGAATCGACGACCTAACGAGCAGAGGCCAATTTCTGCTC
GGCCGTGACGTAGGTCTTGAACTTATGACCGTTCACCTCAATCGCCGTGC
CACTATGTTCAAATCCCCCGCACGCACCCGACCAGTCCTCCCCCCACATG
CAACACCTCCTCCCACTCCCCAACCATTCTACTTTCCTCTATGCATCTGG
TTCTCCTCATTTCGTTTTCCCCATTCCTCCCGCATACCCAAATACCCCTC
CTCGAATTGCACCCACACACGAACCGACCTGCTACACCACCGGCCCTACG
CCCGCACGACCCTGTTCATCTAGCTATTTCTTCCTACCTCATTCCTACAT
TCTGACCTGCACGGCCCAGTCGGGCTCTCATCC
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