DY259819

Overview
NameDY259819
Unique NameDY259819
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length983
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.954e-21
Identity = 45/94 (47.87%), Postives = 67/94 (71.28%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   +YKA+DE  ++KV AKN LE+ AFNM++TV+ + +  K+   D+KKI D  +Q I W+++N +AE +E+E Q KELE +C+ II K+YQ
Sbjct:  521 VQEAERYKADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQ 614          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 9.082e-21
Identity = 43/89 (48.31%), Postives = 66/89 (74.16%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            KYKAEDE    +++AKN LE+YA+++RN++ D  +  K+D +DK+ I+ A+ + I+WLD N  A  DE+ED+ KELE + +PI+AK+YQ
Sbjct:  522 KYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.082e-21
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            KY+A+D   + +VEAKN LENYA++M+NT+ D  +  KLD +DK  +   ID  ++WL SN  A  +E+E + KELES+C+PI+ KMYQ
Sbjct:  526 KYEADDRAQRDRVEAKNGLENYAYSMKNTLGDSNVSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQ 614          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.549e-20
Identity = 43/88 (48.86%), Postives = 62/88 (70.45%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMY 280
            KYKAEDE    ++ AKN LE+YA++++NT+ D K+  KLD ADK+K++  ID+ + WLD N  A  +E+E Q KELE + +PI+ K Y
Sbjct:  523 KYKAEDEAETARIGAKNGLESYAYSLKNTLSDSKVDEKLDAADKEKLKSEIDKVVAWLDDNQTATKEEYESQQKELEGVANPIMMKFY 610          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.549e-20
Identity = 44/88 (50.00%), Postives = 64/88 (72.73%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMY 280
            K+K EDE   K+V AKN LE+YA+++RNT+ D K+  KLD ADK+K++  ID+ + WLD N  A  +E+E++ KELE+I +PI+ K Y
Sbjct:  523 KFKEEDEAEAKRVAAKNGLESYAYSLRNTLSDSKVDEKLDAADKEKLKSEIDKIVAWLDENQQATREEYEERQKELEAIANPIMMKFY 610          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.643e-20
Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            KY+A+D+    +VEAKN LENYA++M+NT+ D  +  KLD  DK  +   I+ A++WL SN  A  +E+E + KELE++C+PI+ KMYQ
Sbjct:  527 KYEADDKAQADRVEAKNGLENYAYSMKNTLGDSNVSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELENVCNPIMTKMYQ 615          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.451e-20
Identity = 41/89 (46.07%), Postives = 68/89 (76.40%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            KYKAEDEE+KK++EA+N+LENY + ++++++D+KI  KL P++ +    +I   ++WL+ N LA  +E+E + KE ES+C PI++K+YQ
Sbjct:  537 KYKAEDEENKKRIEARNSLENYCYGVKSSLEDQKIKEKLQPSEIETCMKSITTILEWLEKNQLASKEEYESKQKEAESVCAPIMSKIYQ 625          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.451e-20
Identity = 42/87 (48.28%), Postives = 66/87 (75.86%), Query Frame = 2
Query:   20 YKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMY 280
            +KA+DE  ++ VE+KN LENYA+ +R+T++D+KI +KL   D+K +E+  D+AI WL +N  A  +E+E  MK+LE++C PII+K+Y
Sbjct:  524 FKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVY 610          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.507e-20
Identity = 42/89 (47.19%), Postives = 67/89 (75.28%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            KYKAEDEE++K++EA+N+LENY + ++++++D+KI  KL PA+ +     I   ++WL+ N LA  DE+E + KE ES+C PI++K+YQ
Sbjct:  537 KYKAEDEENRKRIEARNSLENYCYGVKSSLEDQKIKEKLQPAEIETCMKTITTILEWLEKNQLAGKDEYEAKQKEAESVCAPIMSKIYQ 625          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.713e-19
Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            KY+  D+  +  +EAKN LENYA++M+NTV D  +  KL+ +D+  +  AID A++WL+SN  A  +E+E + KELES C+PI+ KMYQ
Sbjct:  101 KYEQADKMQRDALEAKNGLENYAYSMKNTVSDTNVSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTKMYQ 189          
The following BLAST results are available for this feature:
BLAST of DY259819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HSP70_PLEWA6.954e-2147.87Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP71_SCHPO9.082e-2148.31Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_LEIDO9.082e-2149.44Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP70_TRIRU1.549e-2048.86Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_NEUCR1.549e-2050.00Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_LEIAM2.643e-2048.31Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_PLACB3.451e-2046.07Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HS7C2_DICDI3.451e-2048.28Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP70_PLAFA4.507e-2047.19Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_LEIBR1.713e-1948.31Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YE19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259819 ID=DY259819; Name=DY259819; organism=Citrus clementina; type=EST; length=983bp
GGTTCAACACCTTTAGAAGTACAAAGCTGAAGACGAGGAGCACAAGAAGA
AGGTCGAGGCCAAGAATGCCTTGGAAAACTATGCCTTCAATATGAGGAAC
ACTGTCCAGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAA
GAAGATTGAGGATGCCATTGATCAGGCAATTCAATGGCTTGATAGCAACC
CGCTGGCTGAGGCCGATGAATTTGAAGACCAGATGAAGGAGCTTGAGAGC
ATCTGCGATCCCATCATTGCCAAGATGTATCAAGGTGCTGGTGGTGATAT
GGGCGGTGGCATGGATGATGATGCTCCTCCAGCTGGAGGCAGTGCGGCCG
GTCCCAAGATTGAGGAAGTTGACCACGCTACCCGTTGCAGGATGTAGCGC
CACACACACACGAGTCCGCAACGCCATCCCCCGCGGAGCTCAAACTAGGA
CATCAAAACTCCTGGCCCCAGACCCAAAATCCACGGTCCCACTCGCCAGC
GGAAGCCAGGACCCCATTGACCCAGGTCATTCCCTAAACAAGAAGCCCCA
CCGCGCATACATACTCCCTAAAGCGGCGGACAATTCTACCCCGCAACCAC
CGACAGCTGGCAGAATCGACGACCTAACGAGCAGAGGCCAATTTCTGCTC
GGCCGTGACGTAGGTCTTGAACTTATGACCGTTCACCTCAATCGCCGTGC
CACTATGTTCAAATCCCCCGCACGCACCCGACCAGTCCTCCCCCCACATG
CAACACCTCCTCCCACTCCCCAACCATTCTACTTTCCTCTATGCATCTGG
TTCTCCTCATTTCGTTTTCCCCATTCCTCCCGCATACCCAAATACCCCTC
CTCGAATTGCACCCACACACGAACCGACCTGCTACACCACCGGCCCTACG
CCCGCACGACCCTGTTCATCTAGCTATTTCTTCCTACCTCATTCCTACAT
TCTGACCTGCACGGCCCAGTCGGGCTCTCATCC
back to top