DY259824

Overview
NameDY259824
Unique NameDY259824
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1001
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1321 contig Ccv1_Contig1321:1..1001. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_AVESA (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.604e-44
Identity = 97/150 (64.67%), Postives = 111/150 (74.00%), Query Frame = 2
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            MSS FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AK Y+LFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MSSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 149          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 7.853e-44
Identity = 96/148 (64.86%), Postives = 111/148 (75.00%), Query Frame = 2
Query:  131 STFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            ++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AKSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    2 ASFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 148          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_SOLLC (V-type proton ATPase 16 kDa proteolipid subunit OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.984e-43
Identity = 95/148 (64.19%), Postives = 109/148 (73.65%), Query Frame = 2
Query:  131 STFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            S F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+ KSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    2 SNFAGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 148          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_PLECA (V-type proton ATPase 16 kDa proteolipid subunit OS=Pleurochrysis carterae GN=VAP PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.260e-25
Identity = 69/144 (47.92%), Postives = 92/144 (63.89%), Query Frame = 2
Query:  152 TAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGI-NPRA--KSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            TAP             + +GAAYGTAKSGVGV+SMGVM+P+LVMKSI+PVVMAGVLGIYGLIIAVII  G+  P      Y  F G+AHL++GLACG +G+  G    +     +R S++   L++ + + + F  + L  YG+
Sbjct:    8 TAPFFGFMGAAVALIFANLGAAYGTAKSGVGVSSMGVMKPDLVMKSIIPVVMAGVLGIYGLIIAVIIGNGVKGPEGGKPQYSSFTGFAHLAAGLACGLSGMAAGIAIGIVGDAGVRASAQQAKLYVGMVLILIFA-EALGLYGL 150          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_HELVI (V-type proton ATPase 16 kDa proteolipid subunit OS=Heliothis virescens GN=VHA16 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.027e-24
Identity = 57/125 (45.60%), Postives = 86/125 (68.80%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I   ++  + +Y L+ G+ HL +GLA G +GL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:   23 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDAPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFA-EVLGLYGL 146          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_MANSE (V-type proton ATPase 16 kDa proteolipid subunit OS=Manduca sexta GN=VHA16 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.179e-23
Identity = 57/125 (45.60%), Postives = 86/125 (68.80%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I   ++  + +Y L+ G+ HL +GLA G +GL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:   23 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDSPSNNYTLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFA-EVLGLYGL 146          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_ASCSU (V-type proton ATPase 16 kDa proteolipid subunit OS=Ascaris suum GN=12 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.179e-23
Identity = 55/123 (44.72%), Postives = 85/123 (69.11%), Query Frame = 2
Query:  206 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            +GAAYGTAKS VG++SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++   +   +  Y L  G+AHL++GL CG  GL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:   31 LGAAYGTAKSAVGISSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLRGKVTSASAGYTLDKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIF-SEVLGLYGM 152          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL2_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis elegans GN=vha-2 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 2.011e-23
Identity = 55/123 (44.72%), Postives = 84/123 (68.29%), Query Frame = 2
Query:  206 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            +GAAYGTAKS VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++   +   +  Y L  G+AHL++GL CG  GL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:   31 LGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIF-SEVLGLYGM 152          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL2_CAEBR (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis briggsae GN=vha-2 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.011e-23
Identity = 55/123 (44.72%), Postives = 84/123 (68.29%), Query Frame = 2
Query:  206 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            +GAAYGTAKS VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++   +   +  Y L  G+AHL++GL CG  GL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:   31 LGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVQAASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIF-SEVLGLYGM 152          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_DROME (V-type proton ATPase 16 kDa proteolipid subunit OS=Drosophila melanogaster GN=Vha16 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.981e-23
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 2
Query:  125 MSSTFSGDET--APXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            MSS  S D     P             S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I   +   +K Y L+ G+ HL +GLA G +GL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MSSEVSSDNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALEEPSK-YSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFA-EVLGLYGL 150          
The following BLAST results are available for this feature:
BLAST of DY259824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_AVESA4.604e-4464.67V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_PHAAU7.853e-4464.86V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_SOLLC2.984e-4364.19V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_PLECA1.260e-2547.92V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_HELVI9.027e-2445.60V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MANSE1.179e-2345.60V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ASCSU1.179e-2344.72V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_CAEEL2.011e-2344.72V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL2_CAEBR2.011e-2344.72V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL_DROME9.981e-2342.11V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259824 ID=DY259824; Name=DY259824; organism=Citrus clementina; type=EST; length=1001bp
CTCACGAGAGACAATTTAATCAAAGCTAATCGGGAGCAGAATTCTGTGCT
ATCCGGGAATTACTTAAAACTTGCGATTACGACTACTCAGATCTTCGTAG
CAAACAGGCAAAATCATCATCGCCATGTCATCGACTTTCTCCGGCGACGA
AACTGCTCCCTTCTTCGGCTTCCTTGGAGCAGCGGCCGCTCTCGTCTTCT
CCTGTATGGGTGCTGCCTATGGGACAGCAAAGAGTGGGGTTGGAGTGGCT
TCAATGGGTGTCATGAGGCCGGAGCTTGTTATGAAATCGATTGTTCCAGT
GGTTATGGCTGGAGTTTTGGGTATTTATGGGTTGATTATTGCTGTTATTA
TTACTACTGGGATCAACCCTAGAGCTAAGTCTTATTATTTGTTTGATGGG
TATGCACATTTGTCTTCGGGGCTTGCTTGTGGTCCGGCCGGACTCTACGT
CGGTAGGGTTCGGGAATTGTTCGTGATGCCTGTTCTACGCCTCTCGTCTA
AAAGCCCACCTCTGTTTATGTACATAGCTGTGAATGTTTCTTTTGTGCTC
AAAGGCCTTAATTTCTACGGTATTTAGGAAATCAATCCGAGGTATCCACT
TGTAAAGATGAACTGCTTGTAAGAAACAAACACCAAGCCTACAGGGACCC
ACCTGTCCGACTCATTCCCCCCACTCTAGTTCCGCAATTCTGTCTCTTTG
CGCATATTCGGCAATCTGAAGCAATTGGCCCAACACGGCGGTTGCCGAGC
CGCCGCGGCCCTGGCCTACCGCGCCCATTCCATCACTCACCTAGAGTACA
CTCCACCTTCACACCTTTCCCTCGTTAACCATCTAAATCTTTAAAAATAT
CACTTACACATCAGTAAATTTGGGATGGGTACTTCACTAGAACTGTTCTC
TATCCATCCATCTCTCTTTTTAACTTCCCTCTCATCTTATGGTTTTCTAG
CCTATCCTGTAAGTCTACATATGATACTGCGATTCCATATTCAATCGCGA
T
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