DY259824

Overview
NameDY259824
Unique NameDY259824
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1001
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_AEDAE (V-type proton ATPase 16 kDa proteolipid subunit OS=Aedes aegypti GN=AAEL000291 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 9.981e-23
Identity = 58/125 (46.40%), Postives = 85/125 (68.00%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I   ++   K Y L+ G+ HL +GLA G +GL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:   26 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDTPTK-YSLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFA-EVLGLYGL 148          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Neurospora crassa GN=vma-3 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.953e-22
Identity = 54/125 (43.20%), Postives = 87/125 (69.60%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            +C+GA+YGTAKSGVG+A+MGV+RP+L++K+IVPV+MAG++GIYGL+++V+I+  +      Y L+ G+  L +GLA G AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:   24 TCLGASYGTAKSGVGIAAMGVLRPDLIVKNIVPVIMAGIIGIYGLVVSVLISDALT--QDHYALYTGFIQLGAGLAVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFA-EVLGLYGL 145          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_NEPNO (V-type proton ATPase 16 kDa proteolipid subunit OS=Nephrops norvegicus PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.104e-21
Identity = 55/125 (44.00%), Postives = 85/125 (68.00%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            S +GAAYGTAKSGVG+++M VMRPEL+MK I+PVVMAG++ IYGL++AV+I  G    A +Y L+ G+ H+ +GL+ G +GL  G    +     +R +++ P L++ + + + F  + L  YG+
Sbjct:   25 SALGAAYGTAKSGVGISAMSVMRPELIMKCIIPVVMAGIIAIYGLVVAVLI-AGKLDEAPTYTLYQGFVHMGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLYVGMILILIFA-EVLGLYGL 147          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_MAIZE (V-type proton ATPase 16 kDa proteolipid subunit (Fragment) OS=Zea mays PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.104e-21
Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 2
Query:  293 VPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            VPVVMAGVLGIYGLIIAVII+TGINP+AK YYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 VPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 93          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL2_YEAST (V-type proton ATPase subunit c' OS=Saccharomyces cerevisiae GN=VMA11 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.104e-21
Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGL----ACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I   ++P  + Y LF+G+ HLS GL    AC  +G  +G V ++ V    R     P LF+ I + + F  + L  YG+
Sbjct:   30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGV----RKYMHQPRLFVGIVLILIF-SEVLGLYGM 152          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL2_KLULA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Kluyveromyces lactis GN=VMA11 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.104e-21
Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGL----ACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            SC+GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL++AV+I  G++P  + Y LF+G+ HLS GL    AC  +G  +G V ++ V    R     P LF+ I + + F  + L  YG+
Sbjct:   30 SCLGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILAVYGLVVAVLIAGGLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGV----RKYMHQPRLFVGIVLILIF-SEVLGLYGM 152          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL2_CANGA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Candida glabrata GN=VMA11 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.882e-21
Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGL----ACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I   ++P  + Y LF+G+ HLS GL    AC  +G  +G V ++ V    R     P LF+ I + + F  + L  YG+
Sbjct:   30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEEYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGV----RKYMHQPRLFVGIVLILIF-SEVLGLYGM 152          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL2_ASHGO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Ashbya gossypii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.153e-21
Identity = 55/129 (42.64%), Postives = 86/129 (66.67%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGL----ACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            S +GAA GTAKSG+G++ +G  RPEL+MKS++PVVM+G+L +YGL++AV++  G++P  + Y LF+G+ HL++GL    AC  +G  +G V ++ V    R     P LF+ I + + F  + L  YG+
Sbjct:   29 SSLGAAIGTAKSGIGISGIGTFRPELIMKSLIPVVMSGILAVYGLVVAVLVAGGLSP-TEEYTLFNGFMHLAAGLCVGFACLSSGYAIGIVGDVGV----RKFMHQPRLFVGIVLILIFA-EVLGLYGM 151          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_SHEEP (V-type proton ATPase 16 kDa proteolipid subunit OS=Ovis aries GN=ATP6V0C PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.342e-21
Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 2
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            MS   SG E A              S +GAAYGTAKSG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I   +N       L+  +  L +GL+ G +GL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MSEAKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLN---DGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFA-EVLGLYGL 146          
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL2_DEBHA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Debaryomyces hansenii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.342e-21
Identity = 53/125 (42.40%), Postives = 83/125 (66.40%), Query Frame = 2
Query:  200 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            SC GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL+++V+I  G++P  ++Y LF+G+ HL+ GL+ G A L  G    +     +R     P LF+ I + + F  + L  YG+
Sbjct:   29 SCAGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILSVYGLVVSVLIAGGLSP-TENYSLFNGFMHLACGLSVGFACLASGYSIGIVGDEGVRQFMHQPRLFVGIVLILIFA-EVLGLYGM 151          
The following BLAST results are available for this feature:
BLAST of DY259824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_AEDAE9.981e-2346.40V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_NEUCR4.953e-2243.20V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_NEPNO1.104e-2144.00V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MAIZE1.104e-2159.57V-type proton ATPase 16 kDa proteolipid subunit (F... [more]
VATL2_YEAST1.104e-2144.96V-type proton ATPase subunit c' OS=Saccharomyces c... [more]
VATL2_KLULA1.104e-2144.19V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL2_CANGA1.882e-2144.96V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL2_ASHGO7.153e-2142.64V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL_SHEEP9.342e-2139.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_DEBHA9.342e-2142.40V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259824 ID=DY259824; Name=DY259824; organism=Citrus clementina; type=EST; length=1001bp
CTCACGAGAGACAATTTAATCAAAGCTAATCGGGAGCAGAATTCTGTGCT
ATCCGGGAATTACTTAAAACTTGCGATTACGACTACTCAGATCTTCGTAG
CAAACAGGCAAAATCATCATCGCCATGTCATCGACTTTCTCCGGCGACGA
AACTGCTCCCTTCTTCGGCTTCCTTGGAGCAGCGGCCGCTCTCGTCTTCT
CCTGTATGGGTGCTGCCTATGGGACAGCAAAGAGTGGGGTTGGAGTGGCT
TCAATGGGTGTCATGAGGCCGGAGCTTGTTATGAAATCGATTGTTCCAGT
GGTTATGGCTGGAGTTTTGGGTATTTATGGGTTGATTATTGCTGTTATTA
TTACTACTGGGATCAACCCTAGAGCTAAGTCTTATTATTTGTTTGATGGG
TATGCACATTTGTCTTCGGGGCTTGCTTGTGGTCCGGCCGGACTCTACGT
CGGTAGGGTTCGGGAATTGTTCGTGATGCCTGTTCTACGCCTCTCGTCTA
AAAGCCCACCTCTGTTTATGTACATAGCTGTGAATGTTTCTTTTGTGCTC
AAAGGCCTTAATTTCTACGGTATTTAGGAAATCAATCCGAGGTATCCACT
TGTAAAGATGAACTGCTTGTAAGAAACAAACACCAAGCCTACAGGGACCC
ACCTGTCCGACTCATTCCCCCCACTCTAGTTCCGCAATTCTGTCTCTTTG
CGCATATTCGGCAATCTGAAGCAATTGGCCCAACACGGCGGTTGCCGAGC
CGCCGCGGCCCTGGCCTACCGCGCCCATTCCATCACTCACCTAGAGTACA
CTCCACCTTCACACCTTTCCCTCGTTAACCATCTAAATCTTTAAAAATAT
CACTTACACATCAGTAAATTTGGGATGGGTACTTCACTAGAACTGTTCTC
TATCCATCCATCTCTCTTTTTAACTTCCCTCTCATCTTATGGTTTTCTAG
CCTATCCTGTAAGTCTACATATGATACTGCGATTCCATATTCAATCGCGA
T
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