DY259830

Overview
NameDY259830
Unique NameDY259830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length913
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_NOCFA (Anthranilate phosphoribosyltransferase OS=Nocardia farcinica GN=trpD PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.001e-19
Identity = 59/139 (42.45%), Postives = 83/139 (59.71%), Query Frame = 3
Query:  207 LIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDE 620
            ++  L    DL+ A+   +++ ++++ A  A I+AF V ++ KG T  E+ GLA  M ++A  V   GDAVDIVGTGGD + +VNIST +SI+ AA G  V K             DVL+ALGV ++L PE V RCV E
Sbjct:    1 MLGALADGRDLSAADTAWAMNEIMSDNATSAQIAAFGVAIKIKGPTPEELGGLATGMFEHARLVSIDGDAVDIVGTGGDRSGSVNISTMSSIVVAAAGVPVVKHGNRAASSKSGGADVLEALGVRLNLGPEAVARCVRE 139          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_MYCGI (Anthranilate phosphoribosyltransferase OS=Mycobacterium gilvum (strain PYR-GCK) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.001e-19
Identity = 74/210 (35.24%), Postives = 102/210 (48.57%), Query Frame = 3
Query:  153 PQPAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVG 770
            P+PA        TP +  ++  L +   L   +   ++D ++   A  A I+AF V ++ K  T  E+  LA  M+K+A  V  + +G   VDIVGTGGDGANTVN+ST ASI+ AA G  V K             D L+ALG+ IDL P+ V RCV E    F    Q            R     T VF+ +GP  NP   +  ++G
Sbjct:    6 PRPAAPTTDPGDTPTWAMILGRLTTGQSLLPGQTAWAMDQIMTGVATPAQIAAFAVSMKMKRPTSAEVTELAEIMLKHALPVPTDTIGTHTVDIVGTGGDGANTVNLSTMASIVVAAAGVPVVKHGNRAASSLSGGADTLEALGLRIDLGPDDVARCVAEVGIGFAFAPQFHPSYRHAGAVRREIGVPT-VFNLLGPLTNPAKPRAGLIG 214          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_METMP (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis GN=trpD PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.001e-19
Identity = 68/189 (35.98%), Postives = 99/189 (52.38%), Query Frame = 3
Query:  207 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGV 773
            +++ LI R +L+  E+    + LLNE+ E  I+A+LV L+ KG T  EI G A+AM   A K++ LGD  D  GTGGDG+ T+N+ST  SI+  AC  KVAK             +V KALG  I   P+  K+ +D+  N+     Q            R   K   +F+ +GP  NP   ++ ++GV
Sbjct:    1 MLNKLIERENLSFEESYELFNVLLNES-EMRIAAYLVALQTKGLTADEIAGFAKAMRDNAVKID-LGDVTDTCGTGGDGSKTINVSTAVSII-LACFTKVAKHGNVSITSNSGSANVYKALGCKIPETPDDAKKSMDK-TNFAFLFAQKYHPALKKIMPVRNELKVKTIFNILGPLANPANPKYQILGV 185          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_CLOTH (Anthranilate phosphoribosyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.001e-19
Identity = 72/205 (35.12%), Postives = 102/205 (49.76%), Query Frame = 3
Query:  210 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV-EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDE-GRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN*TSATQKAKLLI 815
            I  L+   +L+E+E   +LD ++  +A  A I +F+  LR KGET  EI G A+ M   A K+   +   +D  GTGGDG NT NIST  + +AAA G  VAK             DVL+ALGV IDL+P  VK C+++ G  + +    V           R       +F+ +GP  NP   +  V+GV N       A +L+
Sbjct:    6 ISKLVEGKNLSESEIIEALDCIMEGKATPAQIGSFITALRIKGETIEEITGCAKVMRAKADKICPNVDYYIDTCGTGGDGTNTFNISTATAFVAAAGGVYVAKHGNRSVSSKSGSADVLEALGVNIDLDPVQVKECIEKVGIGFIY--APVFHKSMKHAAGPRKELGIRTIFNILGPLTNPSNAKGQVLGVFNPNLTELMANVLL 208          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_BRASO (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=trpD PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.001e-19
Identity = 64/182 (35.16%), Postives = 91/182 (50.00%), Query Frame = 3
Query:  237 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN 779
            L+  +A ++ D +++ EA  + + A L+ LR +GET  EI G    M     +V+   +AVDIVGTGGDG+ +VN+ST AS + A  G  VAK             DVL ALGV IDL P+ V RC+ E    F                 R+      +F+ +GP  NP   +  +VGV +
Sbjct:   17 LSREQAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPANAVDIVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCIREAGIGFM-FAPAHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMVGVFS 197          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_LEIXX (Anthranilate phosphoribosyltransferase OS=Leifsonia xyli subsp. xyli GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.613e-19
Identity = 60/139 (43.17%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  189 TPCFNELIDCLISRVDLTEAEAQ-ASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGV 602
            T  ++ ++  L++R DL+ A+A  A    +  EA +A I+AFL+ LRAKGET  EIVG   A++ +A  +     A+DIVGTGGD   TVNIST A+I+AA  G  V K             DVL ALG+ + L PE V
Sbjct:    4 TQSWSSVLIALLAREDLSVADASWAMRQVMTGEATDAQIAAFLIALRAKGETVDEIVGFRDAVLDHAVGLPVNSMALDIVGTGGDRFGTVNISTTAAIVAAGAGVPVIKHGNRAASSSSGSSDVLAALGIDLTLPPERV 142          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_CHLT3 (Anthranilate phosphoribosyltransferase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.613e-19
Identity = 61/158 (38.61%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  300 ISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGV 773
            I+AFLVLLR +GE   EI G ARA++ +A +    GD +D  GTGGDGANT NIST AS++A ACG KVAK             DVL+A+G  IDL  +  +    E   +      +           R       +F+ +GP +NP   Q  ++GV
Sbjct:   38 IAAFLVLLRQRGEEVEEIYGAARAILNHAEQPILEGDPIDTCGTGGDGANTFNISTAASLIAHACGVKVAKHGNRSISSRCGSADVLEAMGFKIDLPKKETEELFKE-TGFVFLFAPIFHKAMKNVAPVRKELGLRTIFNMLGPLINPARTQRQIIGV 194          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.412e-19
Identity = 67/193 (34.72%), Postives = 90/193 (46.63%), Query Frame = 3
Query:  198 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGV 773
            F  L+  + +   LT  EA    D +++ EA  + + A L+ LR +GET  EI G    M      VE   +AVD+VGTGGD + + NIST AS + A  G  VAK             DVL ALGV IDL+P G+ RC+ E    F                 R+      +F+ +GP  NP      +VGV
Sbjct:    4 FKPLLGKVATGASLTRDEAAYVFDKMMSGEATPSQMGALLMGLRVRGETVEEIAGAVSVMRSKMLSVEAPSEAVDVVGTGGDASGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLDPAGISRCIAEAGIGFMFAPSHHPAMKHVGPT-RVEMGTRTIFNLLGPLSNPAGVTRQMVGV 195          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_VIBVU (Anthranilate phosphoribosyltransferase OS=Vibrio vulnificus GN=trpD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.412e-19
Identity = 67/191 (35.08%), Postives = 96/191 (50.26%), Query Frame = 3
Query:  207 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGV 773
            +I+ L  +  LTE E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L + G+ + ++ E  +  VD     F    Q            R T K   +F+ +GP +NP      ++GV
Sbjct:    4 IINKLYQQASLTEQESQQLFDTIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANAQPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRSAVDNIGVAFLFAPQYHSGVKHAMPV-RQTMKTRTIFNILGPLINPARPNIELMGV 193          
BLAST of DY259830 vs. ExPASy Swiss-Prot
Match: TRPD_SULIA (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.16.27) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.412e-19
Identity = 69/194 (35.57%), Postives = 102/194 (52.58%), Query Frame = 3
Query:  201 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLKALGVVIDLNPEGVKRCVDEGRNWFHDVQQVXXXXXXXXXH*RITSK*TLVFHQIGPKLNPGWGQFSVVGVLN 779
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A K++ + +A+D  GTGGDG  TVN+ST ++IL +     VAK             DVL+ALG  I + PE  K  V +  N+     Q          + R T     +F+ +GP  NP   ++ ++GV +
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLIN-PVAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVHK-TNFVFLFSQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFS 194          
The following BLAST results are available for this feature:
BLAST of DY259830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_NOCFA2.001e-1942.45Anthranilate phosphoribosyltransferase OS=Nocardia... [more]
TRPD_MYCGI2.001e-1935.24Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_METMP2.001e-1935.98Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_CLOTH2.001e-1935.12Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_BRASO2.001e-1935.16Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_LEIXX2.613e-1943.17Anthranilate phosphoribosyltransferase OS=Leifsoni... [more]
TRPD_CHLT32.613e-1938.61Anthranilate phosphoribosyltransferase OS=Chlorohe... [more]
TRPD_XANP23.412e-1934.72Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]
TRPD_VIBVU3.412e-1935.08Anthranilate phosphoribosyltransferase OS=Vibrio v... [more]
TRPD_SULIA3.412e-1935.57Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YF07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259830 ID=DY259830; Name=DY259830; organism=Citrus clementina; type=EST; length=913bp
TGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCCATTTAATAAT
AATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAAACTGTGGATT
TACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAACTGCTATTCAAA
CCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAACGCCCTGCTTT
AATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGGCGGA
GGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCCTTGA
TTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGGAGAG
ATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGTGGAAGG
GCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAACA
CAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGTGGTGCA
AAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGC
TGATGTGTTAAAAGCTTTGGGTGTCGTTATTGACTTGAACCCAGAGGGTG
TAAAAAGGTGTGTGGATGAAGGCAGGAATTGGTTTCATGATGTCCAACAA
GTATCACCCCCGCCTAGAAGTTTGTCCAGCCACTGAAGAATAACCTCCAA
GTAAACACTGGTATTCCACCAAATAGGTCCCAAGTTGAATCCTGGCTGGG
GGCAATTCAGTGTAGTTGGGGTTCTAAATTAAACATCGGCTACTCAAAAG
GCAAAGCTCCTCATTCTAGATGATCAATAAAAATCATCAGTTTCTCAATA
AACAGCTTGAAAGGACACACACCCCTCTGGCTAGAATCTTACCCATTTAC
CCCTCCTTATTTT
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