DY259837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_UREPA (Prolyl-tRNA synthetase OS=Ureaplasma parvum GN=proS PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.950e-25 Identity = 76/252 (30.16%), Postives = 126/252 (50.00%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANM------DSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKM 739 ++Y + +L +PVIKG K+ E+FAG T T+EA + + G+ +Q ATSH LGQ F+K ++I F+ + + Q S +TR IG ++MVH DD+GL+L + IF + + + IC + + + G+K + E++G P+ I +G K+L QV VRRD K+++ + L I +LL +I+ ++ AK+ + I V E + + Q KM Sbjct: 181 DVYTDFVQNYLCIPVIKGLKTPWERFAGAQKTYTIEAMMQD-GQALQSATSHYLGQFFAKAYDIKFQGQDNQMHYVHQMSAGLSTRIIGALIMVHADDQGLIL----------PPDIAFNQIAILTIFSNKNPQLLKISQQ-ICEQLNNYRLFEDHSDKGIGYKLAQQEIEGTPICILVGAKELVNQQVVIVRRDTHEKINVDLTDLKLIIPKLLADIKRNIYEKAKKDLEDSIVFVNNIEELKQVIAQNKM 420
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_UREP2 (Prolyl-tRNA synthetase OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=proS PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.950e-25 Identity = 76/252 (30.16%), Postives = 126/252 (50.00%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANM------DSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKM 739 ++Y + +L +PVIKG K+ E+FAG T T+EA + + G+ +Q ATSH LGQ F+K ++I F+ + + Q S +TR IG ++MVH DD+GL+L + IF + + + IC + + + G+K + E++G P+ I +G K+L QV VRRD K+++ + L I +LL +I+ ++ AK+ + I V E + + Q KM Sbjct: 181 DVYTDFVQNYLCIPVIKGLKTPWERFAGAQKTYTIEAMMQD-GQALQSATSHYLGQFFAKAYDIKFQGQDNQMHYVHQMSAGLSTRIIGALIMVHADDQGLIL----------PPDIAFNQIAILTIFSNKNPQLLKISQQ-ICEQLNNYRLFEDHSDKGIGYKLAQQEIEGTPICILVGAKELVNQQVVIVRRDTHEKINVDLTDLKLIIPKLLADIKRNIYEKAKKDLEDSIVFVNNIEELKQVIAQNKM 420
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_SPHEL (Prolyl-tRNA synthetase OS=Sphingomonas elodea GN=proS PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.676e-25 Identity = 73/240 (30.42%), Postives = 119/240 (49.58%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCE-----AGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVD-------LPRSSLVERIKELLDEIQESLVVAAKQRRDACI 685 E+YR E LA+PV+ G+K E E+F G + T ++EA + + G+ +Q TSH LG FS +I F+N +G+ +A SW +TR IG ++MVHGDD GL + + D C + L + + A +D + + ++ W KG P+ IE+G +D+A V ++R+ + D +PR V +L+ IQ+ L + A++R D+ I Sbjct: 192 EVYRDFAETCLAMPVVAGEKPENERFPGAVSTFSIEAMMQD-GKALQAGTSHFLGTTFSSAQDIKFQNSEGQFELAQTTSWGVSTRMIGGLIMVHGDDDGLRVPPMVAPWQIVIVPMLRDQPEDAATIDYCKSLQAELAKLTALGEPVRALLDLKAVKAQTKRWG-WVKKGAPIVIEVGGRDVAGGNVSVIQRNKLYREDGKLDSRIMPRGDFVAEAAAILESIQQGLYLDARERLDSNI 429
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_MYCPE (Prolyl-tRNA synthetase OS=Mycoplasma penetrans GN=proS PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.677e-24 Identity = 74/264 (28.03%), Postives = 132/264 (50.00%), Query Frame = 2 Query: 8 YRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVER-IKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC**GDVEKEVKRRT 796 Y++ ++L++ V+ G+K+E E+FAG T T+EA +P+ G+ +Q ATSH LG NF+K +++ ++ + + +Q S +TR IG ++M H D+ GLVL + D+ D A + L + S G + E+KG+P ++ +G K++ N + RRD K ++ + I+ L+ E +L ++R ++ I V +EF +AL +K+I W + EK++K T Sbjct: 179 YKKFVNDYLSIAVLMGEKTENERFAGADNTFTIEALMPD-GQVLQSATSHYLGTNFAKSYDLKYQTKNNNYDLMFQTSAGLSTRIIGAIIMSHSDNNGLVLPFKIAPIQFAIVTSNEVNKDS----DELKAIYKNLFGYKYQTYFVEK---SLGLQLQENEIKGIPFQLILGKKEIENNTITIYRRDTREKQNISFKEFNQNFIENLIKEYSSNLFNKTEKRLNSSIEFVNNIDEFKKALDNKKIISAYWSGNAEDEKKLKELT 434
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_MYCGA (Prolyl-tRNA synthetase OS=Mycoplasma gallisepticum GN=proS PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.677e-24 Identity = 74/265 (27.92%), Postives = 128/265 (48.30%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC**GDVEKEVKRRT 796 +LY+R ++ L +P++ G+K+E EKFAG T TVE +P+ G+ +Q ATSH L QNFSK F+I ++ + + + S +TR IG ++M HGDD GLV DT +A + +++ + S G + +++G + +GP DL KN++ + R K + L ++++EL + L AK + + +T+ EF + + K + +C EK++K +T Sbjct: 179 KLYQRFIKDILCIPLVAGEKTEAEKFAGAKTTYTVETIMPD-GQALQSATSHNLSQNFSKAFDIRYQTKNNDYQNVFSMSAGVSTRIIGAIIMTHGDDDGLVFPTKVAPYHISLNCIF---DDTNQELNAKLKELANKYSQKYRVHLNVNKD-STGEIIKNSQLRGDCCVLLMGPNDLKKNEIVFIDRITKQKQFINLDHLDQKLEELFSTFDQKLYQKAKAVFETKVDFAQTFEEFEQKIASGKFVRVFYCNEDLYEKQIKEKT 438
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_PICTO (Prolyl-tRNA synthetase OS=Picrophilus torridus GN=proS PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.397e-23 Identity = 67/244 (27.46%), Postives = 121/244 (49.59%), Query Frame = 2 Query: 26 EFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC 757 E L +P + + +KF G YT + +P+ GR +Q T H G+NF++ ++I + + G+ Q ++ + R + ++ +HGDD GL+L K + + D + L + + A +DSR+NY+PG+KY+ WEM+GVPLRIEIG +++ + V V R N ++++ + IK +L+E + L + A + + + N + + +I WC Sbjct: 183 EKLCLPYNIDMRPDWDKFPGAKYTLAFDTLMPS-GRSLQIGTIHEYGENFARNYDIKYLDINGDLKYVSQTTFGLSERLLAAVIGIHGDDTGLILPASIAPVQAIIIPIPGKSF--KEVLDYSGKILSMLKDINVRAEIDSRENYTPGYKYNDWEMRGVPLRIEIGSREMESSTVTVVSRLNKKRLNISIKE-INNIKNMLNEHDKQLTLNAWKMMEENTVFIDDINNI--PMNKDVLIKAYWC 420
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_SPHAL (Prolyl-tRNA synthetase OS=Sphingopyxis alaskensis GN=proS PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.825e-23 Identity = 72/240 (30.00%), Postives = 120/240 (50.00%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDAC---TATVETLCEAG--ICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD----NGAKVD---LPRSSLVERIKELLDEIQESLVVAAKQRRDACI 685 E+YR E+ LA+PVI G+K E E+F G + T ++EA + + G+ +Q TSH LG F++ I +++ G ++ SW +TR IG ++M HGDD GL + + I D C + ++ L G + +D+ N + ++ W KG P+ +E+GP+D+A V +RRD K++ + + + L++IQ SL A++R DA I Sbjct: 212 EMYRSFAEDVLAMPVIAGEKPENERFPGAVATYSIEAMMQD-GKALQAGTSHYLGTGFAEAAGIRYQDRDGGHSLCHTTSWGTSTRMIGGVIMTHGDDDGLRCPPRIAPHQIVIVPMLRDNGEDAAILDYCRDLESRLKALDAFGEPVRVLLDTGANKAQTKRWG-WVKKGAPIIVEVGPRDVAGGNVAVIRRDRLYQESGKLNSAFVAKGDFIADAAATLEDIQASLYAEARERLDANI 449
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_NOVAD (Prolyl-tRNA synthetase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=proS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 9.057e-23 Identity = 77/245 (31.43%), Postives = 117/245 (47.76%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICAN-----MDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD------------NGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACI 685 E+YR E LA+PVI G K E E+F G + T ++EA + + G+ +Q TSH LG F+K I ++N++G++A+A SW +TR IG ++M HGDD GL + + + C +L + + +D R + +++ W KG+PL +EIG +D V +RRD AK D S+ E L+ IQ +L A+ RRDA I Sbjct: 197 EMYRAFAEGPLAMPVIAGPKPENERFPGAVETFSIEAMMQD-GKALQAGTSHYLGTTFAKAAGIQYQNKEGQQALAHTTSWGVSTRLIGGVIMTHGDDDGLRVPPQVAPQQIVILPMLRDNEGDDALLAYCEEIRASLVKLSVFGERIRVLLDKRPGKATQKRWA-WVKKGMPLILEIGGRDAEGGLVSVLRRDRLWRQDAKPNFVGQAKDDFLASAATE-----LESIQAALYDEARARRDAQI 434
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_ERYLH (Prolyl-tRNA synthetase OS=Erythrobacter litoralis (strain HTCC2594) GN=proS PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.231e-21 Identity = 69/239 (28.87%), Postives = 112/239 (46.86%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDAC-----TATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPR--------SSLVERIKELLDEIQESLVVAAKQRRDA 679 E+YR EE LA+PVI G+K E E+F G + T ++EA + + G+ +Q TSH LG NFS+ I F++ +G + SW +TR IG ++M HGDD GL + + + C E+ + +D + + ++ +W KG P+ IE+G +D+ V +RRD + + + L + I +LD IQ + A+ R+A Sbjct: 195 EVYRAHAEEDLALPVIAGEKPENERFPGAVETWSIEAMMQD-GKALQAGTSHYLGTNFSEAANIKFQDREGGEKYCHTTSWGVSTRMIGGVIMTHGDDDGLKVPPRIAPYQVVILPMLRDKPEDDALLAYCEDLRGKLITESAMGEPVRVLLDKKPGKAAAKRW-NWVRKGAPIVIEVGGRDMENGVVSLLRRDELWNEETGKPAFQAPTPAQLTDEIASMLDSIQAGMFGTAQTWRNA 431
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_NANEQ (Prolyl-tRNA synthetase OS=Nanoarchaeum equitans GN=proS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.354e-17 Identity = 59/176 (33.52%), Postives = 91/176 (51.70%), Query Frame = 2 Query: 230 WQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC 757 WQ S+ + R G + GDD GLV+ KD DT+ I + V L + +DS D +PG+KY ++++ GVPLRI+IG K++ N + VRRDN K + + L E+I ++ E++E L AK + + VKT++E EA+ Q K+ P+C Sbjct: 317 WQTSYGISMRAFGGALYWLGDDLGLVMPYKIAPIQIVIIPILGKD-DTKVI--EYSKKVYELIKDKYRVYLDSDDTKTPGYKYYYYDLIGVPLRIDIGLKEVENNSITIVRRDNKKKYTISLNEL-EKIDQIFKEMEEDLKQKAKSFVNDMVVRVKTFDELKEAIEQNKIAKAPFC 488 The following BLAST results are available for this feature:
BLAST of DY259837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259837 ID=DY259837; Name=DY259837; organism=Citrus clementina; type=EST; length=942bpback to top |