DY259837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_PORG3 (Prolyl-tRNA synthetase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=proS PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.588e-43 Identity = 92/266 (34.59%), Postives = 140/266 (52.63%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC**GDVEKEVKRRTK 799 E+Y EE++A+PV+KG KS E+FAG + T T+EA + + G+ +Q TSH LGQNF+K F + F ++ G + W SW +TR +G ++M H DD GLVL + I + T ++ L GI D+ DN PGWK++ +E+KGVP+R+ +G +DL N + RRD K + + E + LLD+IQ+++ A R V ++ EF E + IL W + E+ +K TK Sbjct: 195 EVYATFAEEYMAMPVVKGVKSANERFAGAVDTYTIEALMQD-GKALQSGTSHFLGQNFAKAFNVTFADKDGNRDFVWATSWGVSTRLMGALIMSHSDDNGLVLPPKLAPYQVVIVPIYRNEEQLAQIDEKATQIIQALRAKGISVKYDNSDNKKPGWKFAEYELKGVPVRLAMGARDLENNTIEIARRDTLTKETVGLDGIEETVATLLDDIQKNIFQKALNYRKEHTITVDSYEEFKEKIEDGGFILAHWDGTSETEERIKAETK 459
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CLOST (Prolyl-tRNA synthetase OS=Clostridium sticklandii GN=proS PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.708e-43 Identity = 98/270 (36.30%), Postives = 147/270 (54.44%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTP------WC**GDVEKEVKRRT 796 +Y+ + E+ LA+PV+ G+KS+ E+FAG T T+EA + + G+ +Q TSH L Q+F+K F+I F+ GE SW +TR IG ++MVHGD++GLVL + +G+ D + L GI +D NYSPGWK++ +EMKGVPLR+EIGP+D+ N RRD +K ++ + +K LLD + ++ A+ RD+ K + EF +RKMI TP WC + E ++K T Sbjct: 186 IYKEMAEDLLAIPVVDGRKSDRERFAGAAATYTIEALM-HDGKALQSGTSHNLAQHFTKAFDITFQGRTGELEYPHHTSWGASTRLIGGIIMVHGDNRGLVLPPRVAPTQVVIIPIAQ---NKEGVLDKAYEIKKELEAKGIRVTLDDDTNYSPGWKFNQYEMKGVPLRLEIGPRDIENNVAMIARRDTLSKDSYSLDNIGDTVKNLLDTVHTDMLERARAHRDSKTFTFKDYEEF-----KRKMIETPGFAKGMWCGEEECEAKIKEDT 446
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CLOBM (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=proS PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.708e-43 Identity = 107/276 (38.77%), Postives = 147/276 (53.26%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRK-MILTPWC**GDVEKEVK-RRTKGEKGPPRPF 826 +Y R+ E+ LA+PV+ GKK+E EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F + G+ +WA TTR IG ++MVHGDD GL L +G+ + E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN K + + +++E+LD I S++ A++ RD + T EF + + + I WC GD E K R G PF Sbjct: 185 MYSRLCEDMLAMPVVMGKKTEKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLEYPHYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPVAQHK---EGVLEKAKELKEKLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEIEIKVQEMLDTIHNSMLEEARKARDEKTYVATTMEEFEDIIENKPGFIKAMWC--GDRACEDKIREVTGATSRCMPF 452
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_PORGI (Prolyl-tRNA synthetase OS=Porphyromonas gingivalis GN=proS PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.619e-43 Identity = 91/266 (34.21%), Postives = 139/266 (52.26%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC**GDVEKEVKRRTK 799 E+Y EE++A+PV+KG KS E+FAG + T T+EA + + G+ +Q TSH LGQNF+K F + F ++ G + W SW +TR +G ++M H DD GLVL + I + T + L GI D+ DN PGWK++ +E+KG+P+R+ +G +DL N + RRD K + + E + LLD+IQ+++ A R V ++ EF E + IL W + E+ +K TK Sbjct: 195 EVYATFAEEYMAMPVVKGVKSANERFAGAVDTYTIEALMQD-GKALQSGTSHFLGQNFAKAFNVTFADKDGNRDFVWATSWGVSTRLMGALIMSHSDDNGLVLPPKLAPYQVVIIPIYRNEEQLAQIDEKATQITQALRAKGISVKYDNSDNKKPGWKFAEYELKGIPVRLAMGARDLENNTIEIARRDTLTKETVGLDGIEETVATLLDDIQKNIFQKALNYRKEHTITVDSYEEFKEKIEDGGFILAHWDGTSETEERIKAETK 459
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CLOB6 (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=proS PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 6.033e-43 Identity = 107/276 (38.77%), Postives = 147/276 (53.26%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRK-MILTPWC**GDVEKEVK-RRTKGEKGPPRPF 826 +Y R+ E+ LA+PV+ GKK+E EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F + G+ +WA TTR IG ++MVHGDD GL L +G+ + E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN K + + +++E+LD I S++ A++ RD + T EF + + + I WC GD E K R G PF Sbjct: 185 MYSRLCEDMLAMPVVMGKKTEKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLEYPHYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPVAQHK---EGVLEKAKELKERLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEIEVKVQEMLDIIHNSMLEEARKSRDEKTYVAITMEEFEDIIENKPGFIKAMWC--GDRACEDKIREVTGATSRCMPF 452
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CHLAD (Prolyl-tRNA synthetase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=proS PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 7.879e-43 Identity = 101/269 (37.55%), Postives = 147/269 (54.65%), Query Frame = 2 Query: 2 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD---NGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC**GDVEKEVKRRTK 799 E+Y E+ +AVPVI+G K+E EKF G L + +EA + + GR +Q TSH LGQNF++ F+I F ++ AW SW +TR IG ++M H DD+GLVL D + + +A + + + +D RD YSPG+K++ WE+KGVP+RIEIGPKD+AK V RRD K +P++ L ERI+ LL E+Q L A R+A + V T++E E + +R W EK ++ T+ Sbjct: 181 EVYADFVEKEMAVPVIRGLKTEKEKFPGALRSYCIEAMMQD-GRALQAGTSHNLGQNFARAFDITFTDQHNTIQYAWTTSWGVSTRLIGALIMTHSDDEGLVLPPRLAPIQVVVVPIYKNDEERSAVMEAVN-RMTAAWKGRLRFKVDDRDTYSPGYKFNEWELKGVPVRIEIGPKDVAKETVALARRDMPGKAGKSFVPQAGLTERIEALLAEMQTGLFQRALAFREARTADVTTYDELKEQI-ERGFARAYWAGSTADEKRIQEETR 446
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_BACFR (Prolyl-tRNA synthetase OS=Bacteroides fragilis GN=proS PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.755e-42 Identity = 93/265 (35.09%), Postives = 147/265 (55.47%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC**GDVEKEVKRRTK 799 +Y E+++AVPV+KG KS E+FAG L T T+EA + + G+ +Q TSH LGQNF+K F++ F N++ + W SW +TR +G ++M H DD GLVL D + I V L + GI D+ DN PG+K++ +E+KGVP+R+ +G +DL N + +RRD K + + ++ LL+EIQ ++ A+ RD+ I+ V +++EF E + + IL W + E+++K TK Sbjct: 196 VYAEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQD-GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEGIVARLKQLGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETYVQNLLEEIQANIYKKARTYRDSRITTVDSYDEFKEKIEEGGFILAHWDGTVETEEKIKEETK 459
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_BACFN (Prolyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=proS PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.755e-42 Identity = 93/265 (35.09%), Postives = 147/265 (55.47%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC**GDVEKEVKRRTK 799 +Y E+++AVPV+KG KS E+FAG L T T+EA + + G+ +Q TSH LGQNF+K F++ F N++ + W SW +TR +G ++M H DD GLVL D + I V L + GI D+ DN PG+K++ +E+KGVP+R+ +G +DL N + +RRD K + + ++ LL+EIQ ++ A+ RD+ I+ V +++EF E + + IL W + E+++K TK Sbjct: 196 VYAEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQD-GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEGIVARLKQLGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETYVQNLLEEIQANIYKKARTYRDSRITTVDSYDEFKEKIEEGGFILAHWDGTVETEEKIKEETK 459
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_FLAPJ (Prolyl-tRNA synthetase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=proS PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 5.107e-42 Identity = 96/266 (36.09%), Postives = 139/266 (52.26%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQR-KMILTPWC**GDVEKEVKRRTK 799 +Y + F+A+PVIKG K+E E+FAG T +EA + + G+ +Q TSH LGQNF+K F++ F N +G++ W SW +TR +G +VM H DD GLVL D + + I + + I D+R PG+K++ WE+KGVP+RI IGPKDL RRD K P+ +V+ I +LL +IQ L A Q RD I+ V + EF + L + I W + E+++K TK Sbjct: 194 VYADFAQNFMAIPVIKGLKTETERFAGAEETYCIEALMQD-GKALQAGTSHFLGQNFAKAFDVKFANAEGKQEHVWGTSWGVSTRLMGALVMTHSDDNGLVLPPNLAPIQVVIVPIFKTDEEFEKISALANDLISQFKKLNISVKFDNRTTQKPGFKFAEWELKGVPVRIAIGPKDLENETFEIARRDTLTKEVKPKEGIVKYISDLLAQIQSDLFSKALQYRDTHITEVSDFEEFKKVLENKGGFISAHWDGTPETEEKIKELTK 458
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CLOBK (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=proS PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 5.107e-42 Identity = 105/276 (38.04%), Postives = 146/276 (52.90%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRK-MILTPWC**GDVEKEVK-RRTKGEKGPPRPF 826 +Y R+ E+ LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F + G+ +WA TTR IG ++MVHGD+ GL L +G+ + E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN K + + +++E+LD I S++ AK+ RD + EF + + + I WC GD E K R G PF Sbjct: 185 MYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHK---EGVLEKAEELKERLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKAMWC--GDKACEDKIREVTGATSRCMPF 452 The following BLAST results are available for this feature:
BLAST of DY259837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259837 ID=DY259837; Name=DY259837; organism=Citrus clementina; type=EST; length=942bpback to top |