DY259837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CLOCE (Prolyl-tRNA synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=proS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.670e-42 Identity = 102/265 (38.49%), Postives = 142/265 (53.58%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRK-MILTPWC**GDVEKEVKRRT 796 +Y + E LA+PVIKG+K+E EKFAG T TVE+ + + G+ +Q TSH G F+K F+I + ++ + Q SW TTR IG ++MVHGDD GLVL +G+ + + L A MD D PGWK+S +EMKGVPLRIEIGPKD+ KNQ VRRDN K+ + +L E + L ++Q+SL+ A++ RD I T EF + + + WC + E VK +T Sbjct: 185 VYADVLENVLAIPVIKGRKTEKEKFAGAHATYTVESLM-HDGKALQSGTSHNFGDGFAKAFDIQYTDKNNQLQYVHQTSWGVTTRLIGAIIMVHGDDSGLVLPPAIAPTQLVIIPV---SQHKEGVLEKANELKQKL-SAKFRVKMDDSDKM-PGWKFSEYEMKGVPLRIEIGPKDIEKNQAVLVRRDNREKIFVSLDNLEETVVNTLADVQKSLLEKARELRDKKTYIAATLEEFDQIINSTPGFVKGMWCGERECEDLVKEKT 443
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CLOBL (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=proS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.670e-42 Identity = 105/276 (38.04%), Postives = 146/276 (52.90%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRK-MILTPWC**GDVEKEVK-RRTKGEKGPPRPF 826 +Y R+ E+ LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F + G+ +WA TTR IG ++MVHGD+ GL L +G+ + E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN K + + +++E+LD I S++ AK+ RD + EF + + + I WC GD E K R G PF Sbjct: 185 MYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHK---EGVLEKAEELKERLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKAMWC--GDRACEDKIREVTGATSRCMPF 452
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CLOBJ (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=proS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.670e-42 Identity = 105/276 (38.04%), Postives = 146/276 (52.90%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRK-MILTPWC**GDVEKEVK-RRTKGEKGPPRPF 826 +Y R+ E+ LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F + G+ +WA TTR IG ++MVHGD+ GL L +G+ + E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN K + + +++E+LD I S++ AK+ RD + EF + + + I WC GD E K R G PF Sbjct: 185 MYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHK---EGVLEKAKELKEKLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKAMWC--GDRACEDKIREVTGATSRCMPF 452
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CLOBH (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=proS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.670e-42 Identity = 105/276 (38.04%), Postives = 146/276 (52.90%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRK-MILTPWC**GDVEKEVK-RRTKGEKGPPRPF 826 +Y R+ E+ LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F + G+ +WA TTR IG ++MVHGD+ GL L +G+ + E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN K + + +++E+LD I S++ AK+ RD + EF + + + I WC GD E K R G PF Sbjct: 185 MYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHK---EGVLEKAKELKEKLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKAMWC--GDRACEDKIREVTGATSRCMPF 452
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CLOB1 (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=proS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.670e-42 Identity = 105/276 (38.04%), Postives = 146/276 (52.90%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRK-MILTPWC**GDVEKEVK-RRTKGEKGPPRPF 826 +Y R+ E+ LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F + G+ +WA TTR IG ++MVHGD+ GL L +G+ + E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN K + + +++E+LD I S++ AK+ RD + EF + + + I WC GD E K R G PF Sbjct: 185 MYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHK---EGVLEKAKELKEKLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKAMWC--GDRACEDKIREVTGATSRCMPF 452
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_BACTN (Prolyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=proS PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 8.711e-42 Identity = 93/265 (35.09%), Postives = 145/265 (54.72%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC**GDVEKEVKRRTK 799 +Y E+++AVPV+KG KS E+FAG L T T+EA + + G+ +Q TSH LGQNF+K F++ F N++ + W SW +TR +G ++M H DD GLVL D + I V L GI D+ DN PG+K++ +E+KGVP+R+ +G +DL N + +RRD K + + +++LL+EIQ ++ A R++ I+ V T+ EF E + + IL W + E+++K TK Sbjct: 196 VYGEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQD-GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETYVQKLLEEIQANIYKKALDYRNSKITTVDTYEEFKEKIEEGGFILAHWDGTTETEEKIKEDTK 459
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_FLAJ1 (Prolyl-tRNA synthetase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=proS PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.138e-41 Identity = 95/266 (35.71%), Postives = 140/266 (52.63%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEAL-GQRKMILTPWC**GDVEKEVKRRTK 799 +Y E F+A+PV+KG K+E E+FAG T +EA + + G+ +Q TSH LGQNF+K F++ F N +G++ W SW +TR +G ++M H DD+GLVL D I A L + I D R PG+K++ WE+KGVP+RI +GPKDL RRDN +K + +V+ + +LL++IQ+ L A R+ I+ V + EF E L G+ I W E+++K TK Sbjct: 194 VYADFAENFMAIPVVKGFKTETERFAGADETYCIEALMQD-GKALQAGTSHFLGQNFAKAFDVKFANAEGKQEHVWGTSWGVSTRLMGALIMTHSDDQGLVLPPNLAPIQVVIVPIHKTDEQLAQITAAVNELTAKLRKLKISVKYDDRTTQKPGFKFAEWELKGVPVRIAVGPKDLENGTFEVARRDNLSKEVVAAEKIVDHVNDLLEQIQKDLFDKALTYRNTHITEVNNFEEFKEVLEGKGGFISAHWDGTAATEEKIKDLTK 458
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_EUBE2 (Prolyl-tRNA synthetase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=proS PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.138e-41 Identity = 98/265 (36.98%), Postives = 142/265 (53.58%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVE-ALGQRKMILTPWC**GDVEKEVKRRT 796 LY EE LA+PVIKG+K++ EKFAG T T+EA + + G+ +Q TSH G F+K F I + ++ + Q SW TTR IG ++M HGDD GLVL K A G+ D + L AG+ +D D +PGWK+S EM+G+P+R+E+GP+D+ NQ VRRD K+ + L +RI E+LD IQ+ ++ A+ R+A ++EF + A + I WC E ++K T Sbjct: 185 LYADFCEEVLAIPVIKGRKTDKEKFAGAEATYTIEALM-HDGKALQSGTSHNFGDGFAKAFGIQYTDKDNKLKYVHQTSWGTTTRLIGAVIMTHGDDSGLVLPPKVAPVQVDVIPIMQKKA---GVLDKAYEVGQALKAAGLRVKVDDSDK-NPGWKFSEQEMRGIPVRVEMGPRDIEANQAVIVRRDTREKITVSIDELADRIPEILDTIQKDMLERARAHREAHTYTALNYDEFKDTAANKAGFIKAMWCGDQACEDKIKEDT 444
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_HALWD (Prolyl-tRNA synthetase OS=Haloquadratum walsbyi (strain DSM 16790) GN=proS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.486e-41 Identity = 88/251 (35.06%), Postives = 139/251 (55.38%), Query Frame = 2 Query: 8 YRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQR-KMILTPWC 757 Y YE+ LA+PV++G K E +KF G TTTVEA +P+ G+ +QGATSH LG F+ F+I + + +A SW + R +G ++M H D++GLVL ++ + + + L +AGI +D RD+ +PG+K++ WE+KGVPLR EIGP + + V + R +G + RS +VE ++E D + L AA++ ++ I I +T +E + +GQ + TPWC Sbjct: 188 YESTYEDLLAIPVLQGAKPEHDKFPGADTTTTVEALMPD-GKSVQGATSHYLGTEFADAFDITYTDTDETSRVAHTTSWGLSWRALGALIMTHSDNQGLVLPPTVAPEQVVIVPI-WQTETKERVLEYAEDVANNLDDAGIRVELDDRDDQNPGFKFNEWELKGVPLRAEIGPDEATEGTVTLIHRPDGESITAERSEIVETVQEQFDAVYAKLYAAAEETLNSNIRIAETRSELLGTIGQHGGYVKTPWC 436
BLAST of DY259837 vs. ExPASy Swiss-Prot
Match: SYP_CHLP8 (Prolyl-tRNA synthetase OS=Chlorobaculum parvum (strain NCIB 8327) GN=proS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.486e-41 Identity = 97/266 (36.47%), Postives = 147/266 (55.26%), Query Frame = 2 Query: 5 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVD-LPRSSLVERIKELLDEIQESLVVAAKQRRDACISIVKTWNEFVEALGQRKMILTPWC**GDVEKEVKRRTK 799 +YR EE++A+PVI GKKSE EKFAG T +EA + + G+ +Q TSH LGQNF+K F+ F+ ++G W SW +TR IG ++M H DDKGLVL D + + + L + GI +D +N SPGWK++ +E++G+P+RIE+GP+D+A+ + RRD K + L + + E I+E+L+ IQ++L A Q R TW EF +A ++ ++ W + E +K TK Sbjct: 179 VYRTFAEEYMAMPVIVGKKSESEKFAGADATYCIEAMMQD-GKALQAGTSHNLGQNFAKAFDCQFQTKEGVLDYVWATSWGVSTRLIGALIMAHSDDKGLVLPPKLASRQVVIIPIL--KGDKEEVRAHARFIAKALNKHGISTFVDDSENNSPGWKFAEYELQGIPVRIELGPRDIAEGKCIVARRDTFEKTEVLLDAEMTENIEEILNNIQQNLYERALQFRQDNTVEATTWEEF-KAGVEKGFVIAHWDGTDETEALIKEETK 440 The following BLAST results are available for this feature:
BLAST of DY259837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259837 ID=DY259837; Name=DY259837; organism=Citrus clementina; type=EST; length=942bpback to top |