DY259838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.978e-34 Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 1 Query: 4 VACFLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLPAND 411 +AC LL++ +GG+ T AL +G+ +V E+++TF L++ YA +DP+ + TI P+ G IVGAN LAGG F GASMNPA SFGPA+ + WTNHWVYW+GP +G ++A VY+ +F+ + H+PL D Sbjct: 122 LACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATGVWTNHWVYWIGPLLGGSLAGFVYESLFMVNKTHEPLLNGD 256
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.471e-33 Identity = 67/137 (48.91%), Postives = 92/137 (67.15%), Query Frame = 1 Query: 4 VACFLLKFSTGGLET-SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLPAND 411 +AC LL TGG E A + GV + AV E V+TF L++ VYAT VD ++ +G + P+ +G +VGANILAGG + GASMNPA SFGPA+ + W +HW+YW+GP IG +A +VY+ +F+ H+PLP ND Sbjct: 113 LACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRA-VGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPRND 248
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.471e-33 Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = 1 Query: 7 ACFLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPL 399 AC LL+F +GG+ T AL G+S +V E+++TF L++ YA +DP+ + I P+ G IVGAN LAGG F GASMNPA SFGPA+ + WTNHWVYW+GP +G +A VY+ +F+ H+PL Sbjct: 121 ACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESLFLVQKMHEPL 250
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 5.151e-31 Identity = 69/136 (50.74%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 7 ACFLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFI-DDNAHQPLPAND 411 ACFLL++ TGGL T AL+ GV VV E V TF L++ +YAT +DP+K G P+ G +VGAN +AG A GASMNPA SFGPAV S WT+HWVYW+GP G +A +VY+ F+ H LP D Sbjct: 114 ACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGA-GPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAAPTHDLLPQQD 248
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 2.164e-29 Identity = 63/137 (45.99%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 4 VACFLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFID----DNAHQPLP 402 +AC LL+ TGG T AL+ GV V E V TF L+ + AT +DP++ P+ G +VGAN +AGGA GASMNPA SFGPA+ + W +HWVYW+GP G +A + Y+ +F+D AHQPLP Sbjct: 118 LACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEWAHHWVYWVGPLAGGPLAVVAYELLFMDVEDAGGAHQPLP 254
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.040e-23 Identity = 55/125 (44.00%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 1 VVACFLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFI 375 V+AC +LK + + ++ ++ + A V E V+ F LVYTV+ TA DP++G + PI IGF+ GAN+LA G F G SMNPA +FG A+V ++ N VYW+GP +G A AA+VYD++ + Sbjct: 117 VMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQAVYWVGPLLGGATAALVYDNVVV 240
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 9.114e-20 Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 34 GGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 381 GGL + + +++ + ++ E+++TF LV+T++A+ + G+IA +AIGF V L + GASMNPA SFGPAV+ W NHW+YW+GP IGA +A +Y+++F D Sbjct: 146 GGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 258
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 1.190e-19 Identity = 54/141 (38.30%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 7 ACFLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLG--------TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLPA 405 AC +L + + G ++ ++ + A + E V+TF +VYTV+ A DP+ G G + + +G + GA +LA G+ GASMNPA SFGPAVVS ++N VYW GP +GAA+AA+V+ + + +P PA Sbjct: 114 ACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVHV-AGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMVGAAVAALVHQAL-VFPTVPEPAPA 252
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.190e-19 Identity = 46/116 (39.66%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 34 GGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 381 GGL + + +++ + ++ E+++TF LV+T++A+ + G++A +AIGF V L + GASMNPA SFGPAV+ W NHW+YW+GP IGA +A +Y+++F D Sbjct: 143 GGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 255
BLAST of DY259838 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.555e-19 Identity = 46/116 (39.66%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 34 GGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 381 GGL + + +++ + ++ E+++TF LV+T++A+ + G+IA +AIGF V L + GASMNPA SFGPAV+ W NHW+YW+GP +GA +A +Y+++F D Sbjct: 143 GGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYVFCPD 255 The following BLAST results are available for this feature:
BLAST of DY259838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259838 ID=DY259838; Name=DY259838; organism=Citrus clementina; type=EST; length=1104bpback to top |