DY259846

Overview
NameDY259846
Unique NameDY259846
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length963
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 8.464e-32
Identity = 74/205 (36.10%), Postives = 109/205 (53.17%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY--------PEFDPALNPDHVPHMLPNC 727
            FY ++CP  E ++R+++        + A   LR  FHDC V+ CD S+LLDS   + +EK+   +  +R F ++E +K AVE+ CPG VSCAD+L L  RD V    GP+  +  GRRDGR S A   +Q LP    + + + + FAA  +D   LV L   H++G +HC     RLY         + DP L   ++  +   C
Sbjct:   28 FYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANETDQ-LPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKC 231          
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.105e-31
Identity = 69/182 (37.91%), Postives = 103/182 (56.59%), Query Frame = 2
Query:  122 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL 667
            GL M +Y  +CP AE I++  V    +     A   +R +FHDC ++ CDAS+LLDST+   +EK+   +  +R +  I++ KE +E  CPGVVSCADI+ ++ RD V   GGPY  +  GR DG++S+ E     LP    + S +++ F   G     +VAL G+H++G   C     RL
Sbjct:   25 GLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRN-LPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL 205          
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.254e-31
Identity = 74/182 (40.66%), Postives = 102/182 (56.04%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 670
            L   FY  TCP A   IR  ++     ++  A   +R +FHDC VQ CDASLLL       SE+    + G+  +  I+  K AVER CPGVVSCADIL ++ RD  VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIY 210          

HSP 2 Score: 24.6386 bits (52), Expect = 1.254e-31
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  771 MTVAPPWVLDNNYYRNLI 824
            + +  P   DNNYYRNL+
Sbjct:  240 LDLVTPNSFDNNYYRNLV 257          
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.254e-31
Identity = 74/182 (40.66%), Postives = 102/182 (56.04%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 670
            L   FY  TCP A   IR  ++     ++  A   +R +FHDC VQ CDASLLL       SE+    + G+  +  I+  K AVER CPGVVSCADIL ++ RD  VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIY 210          

HSP 2 Score: 24.6386 bits (52), Expect = 1.254e-31
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  771 MTVAPPWVLDNNYYRNLI 824
            + +  P   DNNYYRNL+
Sbjct:  240 LDLVTPNSFDNNYYRNLV 257          
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.444e-31
Identity = 81/220 (36.82%), Postives = 117/220 (53.18%), Query Frame = 2
Query:  122 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRK-SRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEFDPALNPDHVPHMLPNCPDAIPEPKAVSYVRN 772
            GL  NFY+  CP+ E+IIR+++K ++KR    A + LR  FHDC VQ C+AS+LL  +     E+    +  +R   F  I N++  V+++C  VVSC+DIL L+ RD VV  GGP   +  GRRD    +  E     LP    + S ++  FA   ++   LVAL G H++G  HC     RLYP  DP +N      +   CP A      V+ +R+
Sbjct:   43 GLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCPTANSSNTQVNDIRS 262          
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.886e-31
Identity = 75/206 (36.41%), Postives = 112/206 (54.37%), Query Frame = 2
Query:  134 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEFDPALNPDHVPHMLPNCP 730
            +FY  TCPQ  DI    +K   +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE+ CP  VSCAD+L ++ +  VV  GGP   + +GRRD  +   ++    LP  + ++ V+ ++F  +G+D P  LVAL G H+ G+  C  ++ RLY      + DP L+  ++  +   CP
Sbjct:   29 SFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCP 234          
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.463e-31
Identity = 77/207 (37.20%), Postives = 110/207 (53.14%), Query Frame = 2
Query:  122 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY----PEFDPALNPDHVPHMLPNCP 730
            G  + FY  TCP+AE I+R  V   +      A   LR  FHDC VQ CD S+L+       +E+    +  ++ F  I+N K  +E  CPGVVSCADIL L+ RD V+   G    + TGRRDGR S A      LP   DS++V  ++F+A+G++   LV L+G H++G   C    +RL+       DP ++P  +  +   CP
Sbjct:   34 GTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGAN---TERTAGPNLNLQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTGQTADPTIDPTFLAQLQTQCP 236          
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.201e-31
Identity = 70/182 (38.46%), Postives = 105/182 (57.69%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL 667
            L+  FYK++CP AE+I++  +++   +    A S LR  FHDC V  CDAS+LLD+    LSEK+   +   +R F  I+ IK  +E  CP  VSC+DIL L+ RD V   GGP+  +  GRRD  K+      Q++P  N S+  ++  F   G++   L+AL G+H++G+  CV    R+
Sbjct:   30 LLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRI 211          
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.201e-31
Identity = 78/200 (39.00%), Postives = 110/200 (55.00%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEFDPALNPDHVPHMLPN 724
            L  NFY  +CP AE I+R  V+       +     LR IFHDC VQ CD S+L+   R   +E+    +  +  F  IE++K  +E  CPG VSCADILVL+ RD V ALGGP +P+ TGRRDGR S A  +   + D + ++  ++  F++ G+    LV L G+H++G  HC     R   + DP  N + +   L N
Sbjct:   31 LSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLI---RGNGTERSDPGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRF--KLDPKGNLELIDASLDN 225          
BLAST of DY259846 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 5.486e-31
Identity = 71/186 (38.17%), Postives = 103/186 (55.38%), Query Frame = 2
Query:  125 LVMNF--YKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP 673
            LV++F  Y+++CP+AE I+   V+         A S LR  FHDC V  CDAS+LLD T   + EK    +   +R F  I++IK  +E  CP  VSCADIL ++ RD VV  GGP   ++ GR+D R +  +     LP  N ++S ++  F  +G+    +VAL G H++G+  C     RL P
Sbjct:   48 LVLDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQP 233          
The following BLAST results are available for this feature:
BLAST of DY259846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1_ORYSJ8.464e-3236.10Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER47_ARATH1.105e-3137.91Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER2_ZINEL1.254e-3140.66Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL1.254e-3140.66Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER12_ARATH1.444e-3136.82Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER2_ARMRU1.886e-3136.41Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER71_ARATH2.463e-3137.20Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER20_ARATH4.201e-3138.46Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER18_ARATH4.201e-3139.00Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER40_ARATH5.486e-3138.17Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YG05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259846 ID=DY259846; Name=DY259846; organism=Citrus clementina; type=EST; length=963bp
CTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTACGAAAGCTGTCTTCT
TGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAGGTCTGCTTTG
GCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTTACAAGGATAC
ATGCCCTCAGGCCGAGGACATTATCAGGGAACAAGTTAAGCTTCTGTACA
AGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACATTTTCCATGAC
TGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGACAAGAAA
GACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGTATGAGGAACTTCA
GGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTT
GTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGC
GCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAA
AAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGC
ATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGG
ACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGA
AGCTGGTGCACCGTCTGTACCCAGAATTTGACCCTGCACTGAACCCTGAC
CATGTTCCGCATATGCTCCCTAATTGTCCTGATGCCATCCCCGAACCCAA
GGCTGTTTCGTATGTGAGGAATGACCGTGGCCCCCCCCTGGGTGCTGGAC
AACAACTACTATAGGAACCTTATTGGACAACCAAGGGCCTGAGGAAGGGT
TGGATCCTCCCGCTTGCCCCCCCGACAAGAGGCACCAAACCCTTTGTTTT
ACAAGAATGGGCCAGATTCCAAACCATCTTCCCTTCAAGGACTTTTTCAA
ATCCCTTTTCCCC
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