DY259854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17 Identity = 44/105 (41.90%), Postives = 56/105 (53.33%), Query Frame = 1 Query: 1 RDFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 315 +DFG TQFGSGWAWL+ + +L V KTPNA NPL LLT+DVWEHAYY+DF+N RP +I ++D LV+W+ Sbjct: 105 QDFGSFDKLKEEFSNAAATQFGSGWAWLI------------------DDGGTLKVTKTPNAENPLAHGQKALLTLDVWEHAYYIDFRNARPAFIKNYLDNLVNWD 191
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.060e-17 Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 58 QFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 342 QFGSGWAWL S K+ L + KTPN NPLV +P+L +DVWEH+YY+D++N RP Y+ F+D L++W+ V + E+A Sbjct: 122 QFGSGWAWL------------------SVKNGKLEISKTPNGENPLVHGATPILGVDVWEHSYYIDYRNARPKYLEAFVDNLINWDYVLELYEAA 198
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.925e-17 Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 58 QFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 345 +FGSGWAWLV D L + TPN PL+ +P+L +DVWEHAYYL++QNRRPDYIS F + +V+W+ V+KR AK Sbjct: 126 RFGSGWAWLVVN------------------DGKLEITSTPNQDTPLMEGKTPILGLDVWEHAYYLNYQNRRPDYISAFWN-VVNWDEVAKRYNEAK 202
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.181e-16 Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 55 TQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDY------SPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 345 T+FGSGWAWLV K D L VV T N NPL+ + +P+L +DVWEHAYYL++QNRRPDY++ F + +V+W+ VSKR +AK Sbjct: 128 TRFGSGWAWLVVK------------------DGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWN-VVNWDEVSKRYAAAK 211
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.543e-16 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 58 QFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 342 QFGSGWAWLV +KD L +V TPN NP+ +P+L +DVWEHAYYL +QN+RPDYI F + +V+W V + E+A Sbjct: 123 QFGSGWAWLVV-----------------DKDGKLEIVSTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYIDAFWN-VVNWNKVDELYEAA 199
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 58 QFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 345 +FGSGWAWLV + +L +V TPN NPL +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 123 RFGSGWAWLVVN------------------NGNLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_RICPR (Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii GN=sodB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = 1 Query: 1 RDFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 333 +DFG QFGSGW W+VY D L ++KT NA P+V P+L DVWEHAYY+D++N+R DYI +F+ +++W+ V L Sbjct: 115 KDFGSFEQFCAQFKQEAVGQFGSGWTWVVYH------------------DNKLQIIKTSNAGTPIVNFMKPILACDVWEHAYYIDYRNKRSDYIDIFIRHMINWKFVEDNL 207
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODM_STAEP (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis GN=sodA PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15 Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 58 QFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 345 +FGSGWAWLV + L +V TPN NPL +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 123 RFGSGWAWLVVN------------------NGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 58 QFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 348 +FGSGWAWLV + L + TPN +P++ +P+L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 126 RFGSGWAWLVVN------------------NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-IVNWDEVAKRYSEAKA 203
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODM_STAXY (Superoxide dismutase [Mn/Fe] OS=Staphylococcus xylosus GN=sodA PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.306e-15 Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 58 QFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 345 +FGSGWAWLV + +L +V TPN NP+ +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 123 RFGSGWAWLVVN------------------NGNLEIVTTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199 The following BLAST results are available for this feature:
BLAST of DY259854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259854 ID=DY259854; Name=DY259854; organism=Citrus clementina; type=EST; length=574bpback to top |