DY259855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_PSEMY (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas mendocina (strain ymp) GN=ispG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.756e-12 Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 2 Query: 149 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 460 F++L+ R+R+ +++CPSC R FD+ + E+ + L + +A++GC+VNGPGE +A G GG+P + GK K + E D L +LI+D Sbjct: 252 FDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELESRVEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGSPNNLVYIDGKPASK--LTNENLVDELEKLIRD 354
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_CORJK (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Corynebacterium jeikeium (strain K411) GN=ispG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.112e-12 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 155 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS----IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 448 +LQ +R K E VSCPSCGR D+ +++ E+ T+ L G+ +A+MGC+VNGPGE DAD G G GK ++V V+K + +Q + LI+ Sbjct: 265 ILQSLNLRPRKLEIVSCPSCGRAQVDVYKLADEV---TAGLEGMEFPLRVAVMGCVVNGPGEARDADLGVASG-NGKGQIFVKGEVIKT-VPEDQIVETLIE 361
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_CORGL (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Corynebacterium glutamicum GN=ispG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.112e-12 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 2 Query: 155 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 448 +LQ +R K E VSCPSCGR D+ ++ E+ E + + +A+MGC+VNGPGE DAD G G GK ++V V+K + Q + LI+ Sbjct: 252 ILQSLNLRPRKLEIVSCPSCGRAQVDVYSLAEEVTEALDGMEVPLRVAVMGCVVNGPGEARDADLGVASG-NGKGQIFVKGEVIKT-VPESQIVETLIE 348
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_CLOPE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Clostridium perfringens GN=ispG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.112e-12 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 191 EYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 457 E++SCP+CGRT DL I+ E+ E+ S + +A+MGC+VNGPGE +AD G GG + G+ + K + E + LI++I+ Sbjct: 260 EFISCPTCGRTQIDLINIAKEVEERLSSCKKNIKVAVMGCVVNGPGEAREADIGIAGGKGEGLIFRKGEIIKK--VKEEDLVEELIKIIE 347
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_CORU7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=ispG PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.059e-11 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 155 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVS----IAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 448 +LQ +R K E VSCPSCGR D+ ++ E+ T+ L G+ +A+MGC+VNGPGE DAD G G GK ++V V+K + +Q + LI+ Sbjct: 265 ILQSLNLRPRKLEIVSCPSCGRAQVDVYTLAEEV---TAGLEGMEFPLRVAVMGCVVNGPGEARDADLGVASG-NGKGQIFVKGEVIKT-VPEDQIVETLIE 361
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_COREF (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Corynebacterium efficiens GN=ispG PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.059e-11 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 2 Query: 155 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 448 +LQ +R K E VSCPSCGR D+ +++ E+ E L + +A+MGC+VNGPGE DAD G G GK ++V ++K + Q LI+ Sbjct: 252 ILQSLNLRPRKLEIVSCPSCGRAQVDVYKLAEEVTEGLDGLEVPLRVAVMGCVVNGPGEARDADLGVASG-NGKGQIFVKGEIIKT-VPESQIVQTLIE 348
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_CORDI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Corynebacterium diphtheriae GN=ispG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.384e-11 Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 155 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 448 +LQ +R E VSCPSCGR D+ ++ E+ T+ L G+SI A+MGC+VNGPGE DAD G G GK ++V V+K + Q + LI+ Sbjct: 270 ILQSLNLRKRGLEIVSCPSCGRAQVDVYSLAEEV---TAALDGMSIPLRVAVMGCVVNGPGEARDADLGVASG-NGKGQIFVRGEVIKT-VPESQIVETLIE 366
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_CLOTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Clostridium tetani GN=ispG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.384e-11 Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 2 Query: 155 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 460 +L+ + + E++SCP+CGRT +L +I+ E+ ++ + +AIMGC+VNGPGE DAD G GG L K V R + E + LI+ IK+ Sbjct: 248 ILRALNLYSKGVEFISCPTCGRTEINLIKIAKEVEKRLDGFDKNIKVAIMGCVVNGPGEARDADIGIAGGK--GYGLIFKKGEVVRKLKEEDLVEGLIEEIKN 348
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_SALTO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ispG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.083e-11 Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 2 Query: 155 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK---RGIAMEQATDALIQLIKDHGRWAEPPAE 490 +L+ +R E VSCPSCGR D+ +++ E+ LP + +A+MGC+VNGPGE +AD G G GK ++V V+K G +E + ++L ++ G AE P E Sbjct: 265 ILESLGLRERGLEIVSCPSCGRAQVDVYKLAEEVTAGLEGLPVPLRVAVMGCVVNGPGEAREADLGVASG-NGKGQIFVKGQVIKTVPEGQIVETLIEEALRLAEEMG--AELPEE 377
BLAST of DY259855 vs. ExPASy Swiss-Prot
Match: ISPG_RENSM (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=ispG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.026e-11 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 155 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 448 +LQ +R K E VSCPSCGR D+ ++ E+ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+ Sbjct: 265 ILQSLNLRPRKLEIVSCPSCGRAQVDVYTLAEEV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASG-NGKGQIFVKGEVIKT-VPESQIVETLIE 361 The following BLAST results are available for this feature:
BLAST of DY259855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259855 ID=DY259855; Name=DY259855; organism=Citrus clementina; type=EST; length=1022bpback to top |