DY259861

Overview
NameDY259861
Unique NameDY259861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length923
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.950e-15
Identity = 59/204 (28.92%), Postives = 105/204 (51.47%), Query Frame = 2
Query:   74 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIG 655
            LG  GL VS LG G     GG    +S+E    ++  A+  G+  FDTA+ Y     E++LG  +K+    R ++ + TK  +   G  +   +G + +++    + SL+RL +EY+D+ + +R D++ P+EE +  M  ++ +G   Y G S  S   I  A++V       P    Q E+ L+ R+ +E ++  L  ++G+G
Sbjct:   76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVG 273          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.950e-15
Identity = 59/204 (28.92%), Postives = 105/204 (51.47%), Query Frame = 2
Query:   74 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIG 655
            LG  GL VS LG G     GG    +S+E    ++  A+  G+  FDTA+ Y     E++LG  +K+    R ++ + TK  +   G  +   +G + +++    + SL+RL +EY+D+ + +R D++ P+EE +  M  ++ +G   Y G S  S   I  A++V       P    Q E+ L+ R+ +E ++  L  ++G+G
Sbjct:   83 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVG 280          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.950e-15
Identity = 59/204 (28.92%), Postives = 105/204 (51.47%), Query Frame = 2
Query:   74 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIG 655
            LG  GL VS LG G     GG    +S+E    ++  A+  G+  FDTA+ Y     E++LG  +K+    R ++ + TK  +   G  +   +G + +++    + SL+RL +EY+D+ + +R D++ P+EE +  M  ++ +G   Y G S  S   I  A++V       P    Q E+ L+ R+ +E ++  L  ++G+G
Sbjct:   76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVG 273          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.950e-15
Identity = 59/204 (28.92%), Postives = 105/204 (51.47%), Query Frame = 2
Query:   74 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIG 655
            LG  GL VS LG G     GG    +S+E    ++  A+  G+  FDTA+ Y     E++LG  +K+    R ++ + TK  +   G  +   +G + +++    + SL+RL +EY+D+ + +R D++ P+EE +  M  ++ +G   Y G S  S   I  A++V       P    Q E+ L+ R+ +E ++  L  ++G+G
Sbjct:   76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVG 273          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: KCAB3_XENLA (Voltage-gated potassium channel subunit beta-3 OS=Xenopus laevis GN=kcnab3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.149e-14
Identity = 62/204 (30.39%), Postives = 102/204 (50.00%), Query Frame = 2
Query:   74 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALK--ELPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIG 655
            LG  GL VS LG G     G   S +S+E   +++  A+  G+  FDTA+ Y     E  LGK LK  E  R +  V TK   +  G  +   +G + +++      SL RL ++Y+D+ + +R+D + P+EE +  M  ++ +G   Y G S  S   I  A++V       P    Q E+ L+ R+ +E ++  L  ++G+G
Sbjct:   76 LGKSGLRVSCLGLGTWVTFG---SQISDEVAENLMTVAYEHGVNLFDTAEVYAAGRAERTLGKILKKKEWRRSSYVVTTK---IYWGGQAETERGLSRKHIIEGLRGSLERLQLDYVDIVFANRMDPNSPMEEIVRAMTFVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVETQLPELYHKIGVG 273          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.960e-14
Identity = 65/210 (30.95%), Postives = 99/210 (47.14%), Query Frame = 2
Query:   74 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN----EILLGKALKE--LPRENIQVATKF--GFVELGFTSVIVKGTPEY-VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA------VHPITAVQLEWSLWARDIENEIVPLCRELGIGI 658
            LG  GL VS+L  G M+    +     E+    I+  A   GI FFDTA+ YG   N    E ++GK   +    RE + +ATK      +       ++G   Y +R   E SL+RL  ++I+LY  H +D   P +E     +  V  GK+ YIG S  +   + +A A         +   Q ++SL  R  E E++P  R+LG+G+
Sbjct:    6 LGRTGLRVSRLCLGTMN----FGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARDLGLGV 211          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: STCV_EMENI (Putative sterigmatocystin biosynthesis dehydrogenase stcV OS=Emericella nidulans GN=stcV PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.960e-14
Identity = 61/215 (28.37%), Postives = 97/215 (45.12%), Query Frame = 2
Query:   65 RVKLGTQGLEVSKLGFGCMSLSGGYNSPLSE---EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVATKFGFVELGFTSVIVKGT-----PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP------DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGISP 664
            RV     G+ VS L  G M   G +   + +   E   +++   +  G  F DTA+ Y    +E  LG+ +     R+ + +ATK+           +K        + +R   EASL +L  +YIDL Y H  D S  +EE +  +  LV  GK+  IG+S+A        +   R H +      Q  W+   RD E EI+P+C+  G+ ++P
Sbjct:   17 RVLSPLAGIRVSPLCLGTMHFGGQWTRAMGDVTKETAFALLDRFYEAGGNFIDTANFYQGEGSEKWLGEWVASRGNRDELVLATKYTMSYRLTGPEKIKSNFQGSHSKSLRLSVEASLAKLRTDYIDLLYVHMWDFSTSVEEVMQSLHHLVAAGKVLNIGISDAPAWVVAKCNEYARFHGLTRFCVYQGRWACSYRDFEREILPMCQSEGLALAP 231          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YP088_YEAST (Putative aryl-alcohol dehydrogenase YPL088W OS=Saccharomyces cerevisiae GN=YPL088W PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.660e-13
Identity = 64/231 (27.71%), Postives = 108/231 (46.75%), Query Frame = 2
Query:   59 VPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDG---ISIIKHAFSKGITFFDTADKYGPYTNEILLGKALK--ELPRENIQVATKF-----------------GFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGISP 664
            V +V+LG  GL++S +  GCMS      +    ED      I+KH + KG+  FDTAD Y    +E ++ + L+   + RE + + TK                   F EL  ++   +G + +++ +  E S++RL   YIDL   HR+D   P++E +  +  +VE G ++YIG S       A        +      + Q  ++L  R+ E E++P  +   IG+ P
Sbjct:    4 VKQVRLGNSGLKISPIVIGCMSYGSKKWADWVIEDKTQIFKIMKHCYDKGLRTFDTADFYSNGLSERIIKEFLEYYSIKRETVVIMTKIYFPVDETLDLHHNFTLNEFEELDLSNQ--RGLSRKHIIAGVENSVKRLGT-YIDLLQIHRLDHETPMKEIMKALNDVVEAGHVRYIGASSMLATEFAELQFTADKYGWFQFISSQSYYNLLYREDERELIPFAKRHNIGLLP 231          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: AAD4_YEAST (Probable aryl-alcohol dehydrogenase AAD4 OS=Saccharomyces cerevisiae GN=AAD4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.660e-13
Identity = 51/185 (27.57%), Postives = 91/185 (49.19%), Query Frame = 2
Query:  149 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVATKFG-----FVELGFTSVIVKGTPEY-VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGISP 664
            +++E    ++   +  G    DTA+ Y    +EI +G+ +K    R+ I +ATKF      +   G  S    G  ++ +      SLR+L  ++ID+ Y H  D    IEE +  +  LV++GK+ Y+G+S+     +  A      H   P +  Q +W++  RD E +I+P+ R  G+ ++P
Sbjct:    4 MNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMKSRKLRDQIVIATKFTGDYKKYEVGGGKSANYCGNHKHSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAP 188          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YCSN_BACSU (Uncharacterized oxidoreductase ycsN OS=Bacillus subtilis GN=ycsN PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.088e-12
Identity = 56/174 (32.18%), Postives = 81/174 (46.55%), Query Frame = 2
Query:  152 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFV-----ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEI---VPLCRE 643
            S+ + +S+I+     GIT FD AD YG YT E L G AL   P  RENI++ TK G V          S     +  ++ +  E SL  L  +YID+   HR D  +  E      + L   GK++Y G+S       R   +  P   V  +  L A ++EN +   + LC+E
Sbjct:   28 SDAELLSLIEWCIDHGITTFDHADIYGGYTCEKLFGNALALSPGLRENIELVTKCGIVLESPERPAHRSHHYNTSKSHILASVEQSLMNLRTDYIDMLLIHRPDPLMDPEGVAEAFQALKCSGKVRYFGVSNFKDHQYRMLESYLPEKLVTNQIELSAYELENMLDGTLNLCQE 201          
The following BLAST results are available for this feature:
BLAST of DY259861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
KCAB1_RAT3.950e-1528.92Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_MUSPU3.950e-1528.92Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_MOUSE3.950e-1528.92Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_BOVIN3.950e-1528.92Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB3_XENLA1.149e-1430.39Voltage-gated potassium channel subunit beta-3 OS=... [more]
YRPG_BACSU1.960e-1430.95Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]
STCV_EMENI1.960e-1428.37Putative sterigmatocystin biosynthesis dehydrogena... [more]
YP088_YEAST1.660e-1327.71Putative aryl-alcohol dehydrogenase YPL088W OS=Sac... [more]
AAD4_YEAST1.660e-1327.57Probable aryl-alcohol dehydrogenase AAD4 OS=Saccha... [more]
YCSN_BACSU4.088e-1232.18Uncharacterized oxidoreductase ycsN OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YG23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259861 ID=DY259861; Name=DY259861; organism=Citrus clementina; type=EST; length=923bp
CAAAAACAACCTTACCGAAATTCTAGCTGCAAGTATGGCAGAAGATAAGA
AACTCCAAGTTCCAAGAGTGAAACTTGGAACCCAAGGCCTTGAGGTTTCA
AAGCTGGGGTTTGGATGCATGAGCCTCAGTGGCGGCTATAATTCTCCACT
CTCTGAAGAGGATGGCATCTCAATAATAAAGCATGCTTTCAGTAAAGGAA
TCACTTTCTTTGACACTGCTGATAAATATGGACCATATACTAATGAAATT
CTTCTTGGAAAGGCGTTGAAGGAGTTACCTAGAGAAAACATACAAGTGGC
CACAAAGTTTGGGTTTGTAGAATTGGGATTTACTTCTGTGATCGTGAAGG
GCACCCCTGAGTATGTGCGCTCGTGTTGTGAAGCTAGTTTGAGGCGCCTT
GATGTGGAATATATTGATCTGTACTATCAACATAGAGTGGACACATCAGT
TCCCATAGAGGAAACCATTGGCGAAATGAAAAAGCTGGTGGAAGAGGGTA
AAATAAAGTACATAGGATTATCTGAGGCTAGCCCAGATACAATTAGGAGA
GCACATGCTGTTCATCCCATCACAGCTGTACAACTGGAATGGTCCCTTTG
GGCTCGGGACATTGAGAATGAGATAGTACCACTTTGCAGGGAGCTTGGCA
TTGGAATAAGTCCCATACTGTCCTCTTGGTCGTGAATTTTTCGGTGGTAA
AGCTGTTGTGGAAAGTGTGGCCTTTGATAGCTTTTTGAAATTTTTCCTCC
GGTTCACCGGAAAAAACCGGGACAAAAACAGAATATCTTTTTCCCCAAAA
AAACCTGGCCAAAAAATACAAAGCCCTCCTGTCAATTACCCTCGGAAGGG
TTCCCCCCCGGGGGAGATGCTCACCCTTTCCCGCGAAACCACAAACACAA
CCCGAACAACATATGGCTCCTTC
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