DY259861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.088e-12 Identity = 59/204 (28.92%), Postives = 97/204 (47.55%), Query Frame = 2 Query: 74 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIG 655 LG GL VS LG G G S +S+E ++ A+ G+ FDTA+ Y E LG LK R + + TK + G + +G + +++ + SL RL +EY+D+ + +R D S P+EE + M ++ +G Y G S S I A+++ P Q E + R+ +E ++ L ++G+G Sbjct: 83 LGKSGLRVSCLGLGTWVTFG---SQISDETAEDLLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFW---GGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPVCEQAENHFFQREKVEMQLPELYHKIGVG 280
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11 Identity = 57/204 (27.94%), Postives = 95/204 (46.57%), Query Frame = 2 Query: 74 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIG 655 LG GL VS LG G G S +S+E ++ A+ G+ FDTA+ Y E LG LK R + + TK + G + +G + +++ SL RL + Y+D+ + +R D + P+EE + M ++ +G Y G S I A+++ P Q E L+ R+ +E ++ L ++G+G Sbjct: 83 LGKSGLRVSCLGLGTWVTFG---SQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFW---GGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVG 280
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YDBC_ECOLI (Putative oxidoreductase ydbC OS=Escherichia coli (strain K12) GN=ydbC PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 51/205 (24.88%), Postives = 101/205 (49.27%), Query Frame = 2 Query: 74 LGTQGLEVSKLGFGCMSLSGG--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRV--DTSVP----IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGISP 664 LGT+ V++LG+G M L+G + P I++++ A + G+ DT+D YGP+ ++ +AL +++ + TK G S + +P ++ +LR L ++ +D+ + D P IE ++ + ++ ++G +K+IGLS +P + A + I VQ E+++ A ++ ++ GI P Sbjct: 8 LGTKS--VNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPY-SDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNI-AHRADDAMIDALAHDGIAYVP 208
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YEAE_ECOLI (Uncharacterized protein yeaE OS=Escherichia coli (strain K12) GN=yeaE PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 167 ISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE---ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRE 643 ++ ++ G+T DTA+ Y E ++G+AL L RE + + +K G I + CEASLRRL+ +Y+DLY H S EET+ M+KL+ +GKI+ G+S A + + + Q+ + L +R IE +++P C++ Sbjct: 35 VAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGL-REKVFLVSKVYPWNAGGQKAI---------NACEASLRRLNTDYLDLYLLH-WSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLLPWCQQ 185
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: Y2320_MYCBO (Uncharacterized oxidoreductase Mb2320 OS=Mycobacterium bovis GN=Mb2320 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 60/200 (30.00%), Postives = 94/200 (47.00%), Query Frame = 2 Query: 92 EVSKLGFGCMSLSG---GYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVP---LCRELGIGISPI 667 +VS++G G GY + I+K A + G+T FDTA+ YG +E +LG+AL + R + VA+K V P +++ AS RRL + I LY H+ + VP + M+ L++ G I G+S S R+A A P+ + Q+ +SL D ++VP L + I SP+ Sbjct: 11 QVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGD-DRTEVVVASKV---------FPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPL 200
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: Y2298_MYCTU (Uncharacterized oxidoreductase Rv2298/MT2355 OS=Mycobacterium tuberculosis GN=Rv2298 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 60/200 (30.00%), Postives = 94/200 (47.00%), Query Frame = 2 Query: 92 EVSKLGFGCMSLSG---GYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVP---LCRELGIGISPI 667 +VS++G G GY + I+K A + G+T FDTA+ YG +E +LG+AL + R + VA+K V P +++ AS RRL + I LY H+ + VP + M+ L++ G I G+S S R+A A P+ + Q+ +SL D ++VP L + I SP+ Sbjct: 11 QVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGD-DRTEVVVASKV---------FPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPL 200
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: AAD3_YEAST (Putative aryl-alcohol dehydrogenase AAD3 OS=Saccharomyces cerevisiae GN=AAD3 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11 Identity = 54/227 (23.79%), Postives = 104/227 (45.81%), Query Frame = 2 Query: 38 AEDKKLQVPRVKL--GTQGLEVSKLGFGCMSLSGG---YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVATKFGFVELGF------TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGISP 664 A D ++ R++ T ++VS L G +S G + +++ ++ + G F D A+ +E +G+ ++ R+ I +ATKF + + T+ + SLR+L ++ID+ Y H D IEE + + LV++GK+ Y+G+S+ + A + P + Q +W++ RD E +I+P+ R G+ ++P Sbjct: 5 ASDSSSKLGRLRFLSETAAIKVSPLILGEVSYDGARSDFLKSMNKNRAFELLDTFYEAGGNFIDAANNCQNEQSEEWIGEWIQSRRLRDQIVIATKFIKSDKKYKAGESNTANYCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEFMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSYGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAP 231 The following BLAST results are available for this feature:
BLAST of DY259861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259861 ID=DY259861; Name=DY259861; organism=Citrus clementina; type=EST; length=923bpback to top |